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The map label for this gene is ycfO [H]

Identifier: 218928751

GI number: 218928751

Start: 1837493

End: 1838524

Strand: Direct

Name: ycfO [H]

Synonym: YPO1615

Alternate gene names: 218928751

Gene position: 1837493-1838524 (Clockwise)

Preceding gene: 218928750

Following gene: 218928752

Centisome position: 39.48

GC content: 52.13

Gene sequence:

>1032_bases
GTGGGTCCCGTGATGTTAGATGTTGCCAGCTATGAGCTGGATGCTGAAGAGCGTGAGATTTTAAAACACCCACTGGTGGG
AGGGTTGATCTTATTCAGCCGTAATTTTCATGATGCGGAGCAGTTACGCGAATTAGTACGCCAAATCCGTGCAGCATCGC
ATGAACGTTTGGTGGTCGCAGTGGATCAGGAAGGGGGGCGGGTCCAACGCTTTCGTGACGGTTTTACCCGCCTGCCAGCG
GCTCAGTATTTCGCGGCTATCAATGATGCCGCTACTGCGGCTCAACTGGCGCAAGAGGCGGGGTGGTTGATGGCAGCAGA
AATGATGGCGATGGATATCGATATCAGTTTTGCTCCAGTACTGGATATTGGCCATGTCAGCGCCGCAATTGGTGAGCGTT
CATTCCACAGTGATCCACAACAGGCGCGGATAATGGCGGAGTGTTTCATCCGTGGGATGCACAGTGCAGGGATGAAAACC
ACGGGCAAGCATTTTCCAGGGCACGGCGCAGTAACCGCAGATTCACATAAAGAGACGCCACATGATAATCGGCCACTGGC
AGAAATCCGTACTCATGATATGGTTATATTTCGTGAATTGATCCAGCGGAAATTACTGGATGCGATTATGCCTGCTCACG
TGATTTATACCGAAGCCGATGCACGGCCTGCCAGCGGTTCTGCCTATTGGTTACAAGAGATATTGCGCCAAGAGCTAGGG
TTCGAGGGCATCATTTTCTCTGATGATCTCTCGATGGAAGGGGCTGCGATCATGGGCAGTTACGCCGAGCGCGGCCAGGC
ATCGTTGGATGCCGGTTGCGATATGATTTTGGTGTGTAATAACCGTCAGGGGGCCGTGAGTGTGCTGGATAATCTGTCTC
CGATCAAAGCCGACCAACTGACCCGTTTGTACCATTCAGGGCAATTTGACCGCCAGACATTGATGGCTTCATCCCGTTGG
CAACAGGCGAATAAAGCATTAACGGCACTCAGCGAACGTTGGGATGCACATAAACAAACGTTGGGGCAATAG

Upstream 100 bases:

>100_bases
TTGCGCCAACGTTTTAATTTGTCTTTTTAAGCCCTGCGGCACCAAGCCCGCCGCTTCAAGCACGAAGGGTCGTTATCAAT
CTGAATAAAGTGAGGTGACC

Downstream 100 bases:

>100_bases
GAGTAGCGCCGGGTACGCTTCGGTATTATTACTCGCCTCATAAGGGCCAAGAGCTCCCTCTTTTCTGTGGGGGCTTTGAT
CAGTAACGCACACTGCCGCG

Product: beta-hexosaminidase

Products: NA

Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase [H]

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MGPVMLDVASYELDAEEREILKHPLVGGLILFSRNFHDAEQLRELVRQIRAASHERLVVAVDQEGGRVQRFRDGFTRLPA
AQYFAAINDAATAAQLAQEAGWLMAAEMMAMDIDISFAPVLDIGHVSAAIGERSFHSDPQQARIMAECFIRGMHSAGMKT
TGKHFPGHGAVTADSHKETPHDNRPLAEIRTHDMVIFRELIQRKLLDAIMPAHVIYTEADARPASGSAYWLQEILRQELG
FEGIIFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRQGAVSVLDNLSPIKADQLTRLYHSGQFDRQTLMASSRW
QQANKALTALSERWDAHKQTLGQ

Sequences:

>Translated_343_residues
MGPVMLDVASYELDAEEREILKHPLVGGLILFSRNFHDAEQLRELVRQIRAASHERLVVAVDQEGGRVQRFRDGFTRLPA
AQYFAAINDAATAAQLAQEAGWLMAAEMMAMDIDISFAPVLDIGHVSAAIGERSFHSDPQQARIMAECFIRGMHSAGMKT
TGKHFPGHGAVTADSHKETPHDNRPLAEIRTHDMVIFRELIQRKLLDAIMPAHVIYTEADARPASGSAYWLQEILRQELG
FEGIIFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRQGAVSVLDNLSPIKADQLTRLYHSGQFDRQTLMASSRW
QQANKALTALSERWDAHKQTLGQ
>Mature_342_residues
GPVMLDVASYELDAEEREILKHPLVGGLILFSRNFHDAEQLRELVRQIRAASHERLVVAVDQEGGRVQRFRDGFTRLPAA
QYFAAINDAATAAQLAQEAGWLMAAEMMAMDIDISFAPVLDIGHVSAAIGERSFHSDPQQARIMAECFIRGMHSAGMKTT
GKHFPGHGAVTADSHKETPHDNRPLAEIRTHDMVIFRELIQRKLLDAIMPAHVIYTEADARPASGSAYWLQEILRQELGF
EGIIFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRQGAVSVLDNLSPIKADQLTRLYHSGQFDRQTLMASSRWQ
QANKALTALSERWDAHKQTLGQ

Specific function: Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides [H]

COG id: COG1472

COG function: function code G; Beta-glucosidase-related glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787350, Length=338, Percent_Identity=76.6272189349112, Blast_Score=543, Evalue=1e-156,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022956
- InterPro:   IPR019800
- InterPro:   IPR001764
- InterPro:   IPR017853 [H]

Pfam domain/function: PF00933 Glyco_hydro_3 [H]

EC number: =3.2.1.52 [H]

Molecular weight: Translated: 37980; Mature: 37848

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS00775 GLYCOSYL_HYDROL_F3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPVMLDVASYELDAEEREILKHPLVGGLILFSRNFHDAEQLRELVRQIRAASHERLVVA
CCCEEEEEHHCCCCHHHHHHHHCCCHHHHEEEECCCCCHHHHHHHHHHHHHCCCCEEEEE
VDQEGGRVQRFRDGFTRLPAAQYFAAINDAATAAQLAQEAGWLMAAEMMAMDIDISFAPV
ECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCH
LDIGHVSAAIGERSFHSDPQQARIMAECFIRGMHSAGMKTTGKHFPGHGAVTADSHKETP
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCC
HDNRPLAEIRTHDMVIFRELIQRKLLDAIMPAHVIYTEADARPASGSAYWLQEILRQELG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCHHHHHHHHHHHCC
FEGIIFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRQGAVSVLDNLSPIKADQL
CCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCCCHHHH
TRLYHSGQFDRQTLMASSRWQQANKALTALSERWDAHKQTLGQ
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GPVMLDVASYELDAEEREILKHPLVGGLILFSRNFHDAEQLRELVRQIRAASHERLVVA
CCEEEEEHHCCCCHHHHHHHHCCCHHHHEEEECCCCCHHHHHHHHHHHHHCCCCEEEEE
VDQEGGRVQRFRDGFTRLPAAQYFAAINDAATAAQLAQEAGWLMAAEMMAMDIDISFAPV
ECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCH
LDIGHVSAAIGERSFHSDPQQARIMAECFIRGMHSAGMKTTGKHFPGHGAVTADSHKETP
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCC
HDNRPLAEIRTHDMVIFRELIQRKLLDAIMPAHVIYTEADARPASGSAYWLQEILRQELG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCCHHHHHHHHHHHCC
FEGIIFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRQGAVSVLDNLSPIKADQL
CCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCCCHHHH
TRLYHSGQFDRQTLMASSRWQQANKALTALSERWDAHKQTLGQ
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA