| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218928659
Identifier: 218928659
GI number: 218928659
Start: 1725854
End: 1726381
Strand: Direct
Name: 218928659
Synonym: YPO1518
Alternate gene names: NA
Gene position: 1725854-1726381 (Clockwise)
Preceding gene: 218928650
Following gene: 218928662
Centisome position: 37.09
GC content: 35.23
Gene sequence:
>528_bases TTGGTTTTTCACCTTTTCCCGTTGATCACTTGTTTTTCACTGAATCCATTAACCATACCTTTATCTGGGGCATTTTTACT TTATCTTATATTTATTAATATTTATGTCGATACGCCCCCGAGTTGTGAACGTAAGAAACAGCAGTCCAATATATTACCTC ACGAGTATCCGGTTGGTTTAACACTACTTTGCTTTAGTGGGTTATATCTGACTTTTTTTGTGTGGTTTGATCTAGATGAT GCGATTATCTTTTTGATGTCGTTATCGTGGCTTTTCTTTTTACTGTCCAAGTGGCGCTGGCAAGTTGTGGCATTAAATGC ATTAGGCGGTGTTGGGTTGTTTTGGTTTTTTTCCTCTGGTTTTGTGGACATAAAGTATCATAAAAATATTATTGTTCGTG CTCTAATTAAAATATCTTTACTGGACAGTTTGTTATTTATTATTTTCTCATTAAGCTTATTTATCAATATGTTATTTTGG TTGGAGGAGTGGCAGCGCACACGGCAACCATTAAAAAAAGATGAGTGA
Upstream 100 bases:
>100_bases ATTACATGCACTTATCCGCCTTTTACCTGCGACTTTGTCACTGGTCCTGCTGCTGCCCTGTGCCGCGCGCCTTGCTAGTC AACGGTTGAGCCAGTATCTA
Downstream 100 bases:
>100_bases GACATTTTTCGTTGGAAATGACGGGTTTCAATCATAAAAATGCCGGTAGGGTTACCCCAGACCGGCATTTTGTTGTGCCC AGAAAACCCCCAGCTAGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MVFHLFPLITCFSLNPLTIPLSGAFLLYLIFINIYVDTPPSCERKKQQSNILPHEYPVGLTLLCFSGLYLTFFVWFDLDD AIIFLMSLSWLFFLLSKWRWQVVALNALGGVGLFWFFSSGFVDIKYHKNIIVRALIKISLLDSLLFIIFSLSLFINMLFW LEEWQRTRQPLKKDE
Sequences:
>Translated_175_residues MVFHLFPLITCFSLNPLTIPLSGAFLLYLIFINIYVDTPPSCERKKQQSNILPHEYPVGLTLLCFSGLYLTFFVWFDLDD AIIFLMSLSWLFFLLSKWRWQVVALNALGGVGLFWFFSSGFVDIKYHKNIIVRALIKISLLDSLLFIIFSLSLFINMLFW LEEWQRTRQPLKKDE >Mature_175_residues MVFHLFPLITCFSLNPLTIPLSGAFLLYLIFINIYVDTPPSCERKKQQSNILPHEYPVGLTLLCFSGLYLTFFVWFDLDD AIIFLMSLSWLFFLLSKWRWQVVALNALGGVGLFWFFSSGFVDIKYHKNIIVRALIKISLLDSLLFIIFSLSLFINMLFW LEEWQRTRQPLKKDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20573; Mature: 20573
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFHLFPLITCFSLNPLTIPLSGAFLLYLIFINIYVDTPPSCERKKQQSNILPHEYPVGL CEEHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHH TLLCFSGLYLTFFVWFDLDDAIIFLMSLSWLFFLLSKWRWQVVALNALGGVGLFWFFSSG HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHCHHHHHHHHHCC FVDIKYHKNIIVRALIKISLLDSLLFIIFSLSLFINMLFWLEEWQRTRQPLKKDE EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVFHLFPLITCFSLNPLTIPLSGAFLLYLIFINIYVDTPPSCERKKQQSNILPHEYPVGL CEEHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHH TLLCFSGLYLTFFVWFDLDDAIIFLMSLSWLFFLLSKWRWQVVALNALGGVGLFWFFSSG HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHCHHHHHHHHHCC FVDIKYHKNIIVRALIKISLLDSLLFIIFSLSLFINMLFWLEEWQRTRQPLKKDE EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA