| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218928624
Identifier: 218928624
GI number: 218928624
Start: 1682940
End: 1684025
Strand: Direct
Name: 218928624
Synonym: YPO1484
Alternate gene names: NA
Gene position: 1682940-1684025 (Clockwise)
Preceding gene: 218928623
Following gene: 218928625
Centisome position: 36.16
GC content: 40.61
Gene sequence:
>1086_bases ATGCGGATAACAGAGAAGGAACAGACAATGGCAAAAGGCTATTACCTTGGGGTTGGGGATGAAACAACCTGCGGCGGCGT GATCATCGAAGGTGACGCCACACATGTCTTGATGGGTAAAGCGGTGGCCCGTGAACAAGACAGAGTGACCTGCGGTAAAC ATCCGGGAACCTATATTATTATCGGCCATGTTCCTGGCGATTCGGTAAATGGCCGCAAGTTTGCGGGCACCTTGAATAGT CAAAGCAATTGCCCGTGCAAGGCGTGGTTTATTCCTTCTTTGGTGCATGATACGTATGAGTTTGGTGCAAGAAGTAAATC ACAAAATATGTCTGAAATTAGTACTGAAGTCGAACGTGAGATGGTAGAAAATGTGAGTGAATCAGAAGAAAAATCTAAAG TTGTCTGTGCCCATATTGATGGCGCTTTAGTAGTAGCGAGTTATATCCTTGATGAAATAAAGAAAAATGTAAAAAGTGAT ACCGCTGATAAAATCAGATCTTTTATCGATAATGACCTCTATAAAAAAAGACTTAAGGAGTGGCAGGATTCTCCTTGGTA CGCGAGAATGAATGCACCTCCACAGCCTGAAATAATATCGGCATCGGTTTTATGGTTTATGGCGGTCAAGAGTGGTGCTA AATGGGATCATAAACCTAAAATTAGAGATCAATTTAAAGCATATGCAGTTTCTCGTCCTCTGGTCGGAAGCGGAACCCGA TCAAAAAGCTATTTTCATAAATATGAAGAACATGATTATTTTTATGATGTCTGGTCCAATATTCACTATGGTTATGTAGG CTTAAGTCTTGGTTTTGATGAGTCATATTTATTACTTGGCTCAACTCTTGAGCAAGTAAGAACCAGCATCGGGAGTAAAC CAGATCCTATAGATGATATTACATGTATGAAAATTGGCTATGCACTCTATCATCAACATGGAAAATATGCTGAGACGTTA GATGTCAGGCATATACTCGATGCTCTTGAATCAGCATCGGACCTTGATCTAGCTATTTCAAGACAAATTCATTGGTGTTG GAATAATGATAATTCGAGTCAAATTGATCACCCGCAGGGTAAGTAA
Upstream 100 bases:
>100_bases AGGCACAGCGGGGTGACAGTGATAAAACCCGCCTGCATGCTGAAATGGAAAGCCTGCTCAGTGGGCTTATCGCCCTCGAC CCGGCCCGTGCGGCCGTATT
Downstream 100 bases:
>100_bases TGAAAAGAATAATAATGGTTGTTACGATTTTTATCGTATTAGGAATTATTTCTATCACTGTTTTTTATTTTGTTAAGCCT TCTATTTTTCTTTATAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MRITEKEQTMAKGYYLGVGDETTCGGVIIEGDATHVLMGKAVAREQDRVTCGKHPGTYIIIGHVPGDSVNGRKFAGTLNS QSNCPCKAWFIPSLVHDTYEFGARSKSQNMSEISTEVEREMVENVSESEEKSKVVCAHIDGALVVASYILDEIKKNVKSD TADKIRSFIDNDLYKKRLKEWQDSPWYARMNAPPQPEIISASVLWFMAVKSGAKWDHKPKIRDQFKAYAVSRPLVGSGTR SKSYFHKYEEHDYFYDVWSNIHYGYVGLSLGFDESYLLLGSTLEQVRTSIGSKPDPIDDITCMKIGYALYHQHGKYAETL DVRHILDALESASDLDLAISRQIHWCWNNDNSSQIDHPQGK
Sequences:
>Translated_361_residues MRITEKEQTMAKGYYLGVGDETTCGGVIIEGDATHVLMGKAVAREQDRVTCGKHPGTYIIIGHVPGDSVNGRKFAGTLNS QSNCPCKAWFIPSLVHDTYEFGARSKSQNMSEISTEVEREMVENVSESEEKSKVVCAHIDGALVVASYILDEIKKNVKSD TADKIRSFIDNDLYKKRLKEWQDSPWYARMNAPPQPEIISASVLWFMAVKSGAKWDHKPKIRDQFKAYAVSRPLVGSGTR SKSYFHKYEEHDYFYDVWSNIHYGYVGLSLGFDESYLLLGSTLEQVRTSIGSKPDPIDDITCMKIGYALYHQHGKYAETL DVRHILDALESASDLDLAISRQIHWCWNNDNSSQIDHPQGK >Mature_361_residues MRITEKEQTMAKGYYLGVGDETTCGGVIIEGDATHVLMGKAVAREQDRVTCGKHPGTYIIIGHVPGDSVNGRKFAGTLNS QSNCPCKAWFIPSLVHDTYEFGARSKSQNMSEISTEVEREMVENVSESEEKSKVVCAHIDGALVVASYILDEIKKNVKSD TADKIRSFIDNDLYKKRLKEWQDSPWYARMNAPPQPEIISASVLWFMAVKSGAKWDHKPKIRDQFKAYAVSRPLVGSGTR SKSYFHKYEEHDYFYDVWSNIHYGYVGLSLGFDESYLLLGSTLEQVRTSIGSKPDPIDDITCMKIGYALYHQHGKYAETL DVRHILDALESASDLDLAISRQIHWCWNNDNSSQIDHPQGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40703; Mature: 40703
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRITEKEQTMAKGYYLGVGDETTCGGVIIEGDATHVLMGKAVAREQDRVTCGKHPGTYII CCCCCHHHHHHCCEEEECCCCCCCCCEEEECCCCEEEHHHHHHHHCCCCCCCCCCCCEEE IGHVPGDSVNGRKFAGTLNSQSNCPCKAWFIPSLVHDTYEFGARSKSQNMSEISTEVERE EEECCCCCCCCCEEEEECCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHH MVENVSESEEKSKVVCAHIDGALVVASYILDEIKKNVKSDTADKIRSFIDNDLYKKRLKE HHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH WQDSPWYARMNAPPQPEIISASVLWFMAVKSGAKWDHKPKIRDQFKAYAVSRPLVGSGTR HCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC SKSYFHKYEEHDYFYDVWSNIHYGYVGLSLGFDESYLLLGSTLEQVRTSIGSKPDPIDDI CHHHHHHHHCCCHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCH TCMKIGYALYHQHGKYAETLDVRHILDALESASDLDLAISRQIHWCWNNDNSSQIDHPQG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEECEEEEEECCCCCCCCCCCCC K C >Mature Secondary Structure MRITEKEQTMAKGYYLGVGDETTCGGVIIEGDATHVLMGKAVAREQDRVTCGKHPGTYII CCCCCHHHHHHCCEEEECCCCCCCCCEEEECCCCEEEHHHHHHHHCCCCCCCCCCCCEEE IGHVPGDSVNGRKFAGTLNSQSNCPCKAWFIPSLVHDTYEFGARSKSQNMSEISTEVERE EEECCCCCCCCCEEEEECCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHH MVENVSESEEKSKVVCAHIDGALVVASYILDEIKKNVKSDTADKIRSFIDNDLYKKRLKE HHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH WQDSPWYARMNAPPQPEIISASVLWFMAVKSGAKWDHKPKIRDQFKAYAVSRPLVGSGTR HCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC SKSYFHKYEEHDYFYDVWSNIHYGYVGLSLGFDESYLLLGSTLEQVRTSIGSKPDPIDDI CHHHHHHHHCCCHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCH TCMKIGYALYHQHGKYAETLDVRHILDALESASDLDLAISRQIHWCWNNDNSSQIDHPQG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEECEEEEEECCCCCCCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA