| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218928617
Identifier: 218928617
GI number: 218928617
Start: 1670459
End: 1671232
Strand: Direct
Name: 218928617
Synonym: YPO1474
Alternate gene names: NA
Gene position: 1670459-1671232 (Clockwise)
Preceding gene: 218928616
Following gene: 218928618
Centisome position: 35.9
GC content: 32.3
Gene sequence:
>774_bases ATGAAATCATTTACATTACTCTCTTTATTTATACTATCTCAATTTTATTCTTTAAGTGCATTATCTGATGACTCAATCTC AGTAAGAATTGATGACATTAAAATATACCTTAATAATAATGACTTATCAGAGGTCATCTTGGAAAATTTGATAACAGGCA ATGCAAAAAAATGTAAAATAAGCAACTCGACTGAAGAAGATACGAAAAATGGAAACGGTTTTTTACGCATCACCACAGAT AAAAAAGCAATCATATTATTTTCCTCCCATAGATATCTATTAATGAATGAGTTAAATGAGTGTAGCAACGGTAAGACAAA ACTATACTCTCTACCCAACTCGCACATTACTATGCTACAGGATATAAATTTCGAAAATAAGTTATTCCTTCAATTTTCAT TAGAGGATAAAGATAGTTGGTTAGCATCTATTTCTCATTTTGGTAGCAACATAAACTTGTTACGCGGCGAAGGTTTTTAC AATCCAAAAAATAAAAAAAAAGAGCAAGGGTTTTCTCTGGGATATAGCAATGGTGACGGTCAGATTTCAACCAATGGAAA ATATGTCGTAGTAAATGACTTTAACTGCCAGGAAGGTAAGATACCTACAGGCTCTGGAGTCTGGAATATAAAAAGTAACA AAAGAGTAATTTTCCCAACGAAAATAGACGAATTTGGAAGGATTGGAAACAGTGATGAAATACTGGAAAAGTGTATTAAA GTTTTTGAAGGAACATCTACTATTCAACAGCTGGGAGGTACATTAGGCTTATGA
Upstream 100 bases:
>100_bases AAAACAGAGTCATCGAGCGAGTAACAAAAGCAATCAACGGAGCAGATAAAGGACTTGAACAACGCAAATTTTTTACGAAA AAAGCCAAAGGTATAATGAT
Downstream 100 bases:
>100_bases AAATATAGCAGAAACTTTCACAATATAAACAAAAAAATAAAAAATATTGGTTCGCAAAAATAAAACAGACCCTCTCAACA AGACTGTCATTTAAATTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MKSFTLLSLFILSQFYSLSALSDDSISVRIDDIKIYLNNNDLSEVILENLITGNAKKCKISNSTEEDTKNGNGFLRITTD KKAIILFSSHRYLLMNELNECSNGKTKLYSLPNSHITMLQDINFENKLFLQFSLEDKDSWLASISHFGSNINLLRGEGFY NPKNKKKEQGFSLGYSNGDGQISTNGKYVVVNDFNCQEGKIPTGSGVWNIKSNKRVIFPTKIDEFGRIGNSDEILEKCIK VFEGTSTIQQLGGTLGL
Sequences:
>Translated_257_residues MKSFTLLSLFILSQFYSLSALSDDSISVRIDDIKIYLNNNDLSEVILENLITGNAKKCKISNSTEEDTKNGNGFLRITTD KKAIILFSSHRYLLMNELNECSNGKTKLYSLPNSHITMLQDINFENKLFLQFSLEDKDSWLASISHFGSNINLLRGEGFY NPKNKKKEQGFSLGYSNGDGQISTNGKYVVVNDFNCQEGKIPTGSGVWNIKSNKRVIFPTKIDEFGRIGNSDEILEKCIK VFEGTSTIQQLGGTLGL >Mature_257_residues MKSFTLLSLFILSQFYSLSALSDDSISVRIDDIKIYLNNNDLSEVILENLITGNAKKCKISNSTEEDTKNGNGFLRITTD KKAIILFSSHRYLLMNELNECSNGKTKLYSLPNSHITMLQDINFENKLFLQFSLEDKDSWLASISHFGSNINLLRGEGFY NPKNKKKEQGFSLGYSNGDGQISTNGKYVVVNDFNCQEGKIPTGSGVWNIKSNKRVIFPTKIDEFGRIGNSDEILEKCIK VFEGTSTIQQLGGTLGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28784; Mature: 28784
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSFTLLSLFILSQFYSLSALSDDSISVRIDDIKIYLNNNDLSEVILENLITGNAKKCKI CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHCCCCCEEEE SNSTEEDTKNGNGFLRITTDKKAIILFSSHRYLLMNELNECSNGKTKLYSLPNSHITMLQ CCCCCCCCCCCCEEEEEEECCEEEEEEECCCEEEEHHHHHCCCCCEEEEECCCCCEEEEE DINFENKLFLQFSLEDKDSWLASISHFGSNINLLRGEGFYNPKNKKKEQGFSLGYSNGDG ECCCCCEEEEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCC QISTNGKYVVVNDFNCQEGKIPTGSGVWNIKSNKRVIFPTKIDEFGRIGNSDEILEKCIK EEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCEEEECCCCHHHHCCCCHHHHHHHHHH VFEGTSTIQQLGGTLGL HHCCHHHHHHCCCCCCC >Mature Secondary Structure MKSFTLLSLFILSQFYSLSALSDDSISVRIDDIKIYLNNNDLSEVILENLITGNAKKCKI CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHCCCCCEEEE SNSTEEDTKNGNGFLRITTDKKAIILFSSHRYLLMNELNECSNGKTKLYSLPNSHITMLQ CCCCCCCCCCCCEEEEEEECCEEEEEEECCCEEEEHHHHHCCCCCEEEEECCCCCEEEEE DINFENKLFLQFSLEDKDSWLASISHFGSNINLLRGEGFYNPKNKKKEQGFSLGYSNGDG ECCCCCEEEEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCC QISTNGKYVVVNDFNCQEGKIPTGSGVWNIKSNKRVIFPTKIDEFGRIGNSDEILEKCIK EEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCEEEECCCCHHHHCCCCHHHHHHHHHH VFEGTSTIQQLGGTLGL HHCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA