| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is yliJ [H]
Identifier: 218928464
GI number: 218928464
Start: 1478270
End: 1478890
Strand: Reverse
Name: yliJ [H]
Synonym: YPO1314
Alternate gene names: 218928464
Gene position: 1478890-1478270 (Counterclockwise)
Preceding gene: 218928465
Following gene: 218928457
Centisome position: 31.78
GC content: 48.95
Gene sequence:
>621_bases ATGCTGACAGTCTGGGGCCGAAATAACTCGACCAATGTCAAAAAAGTGCTGTGGTGCTTGGAAGAACTGGGAATCCCCTA TCAGCGCATTGATGTCGGGGGGCAATATGGCAAACTCAATGACCCACAGTACCGCGCGTTAAATCCAAATGGTTTGATCC CCTGCCTGCAAGATAAGGATTTCATCCTGTGGGAATCCAACACCATTGTGCGTTATCTAGCCGCACAATATGGTCAAAAT TCACTTTATCTGGCCGATCACCACCAGCGGGCCAGTGCAGAAAAATGGATGGATTGGGCGACATCCAGTGTAGTAGAGCC CTTTAAAGCTGTGTTTATCGGTTTGGTGCGCACCCCACCAGAACAGCAGGATAAAGTGAAAATTGCTCAGGGAATGGAGA AAATGAATACGTTGATGTCCATTGCCAATGACGCGTTGGGGGAACAAGCCTATCTTTCCGGCGATGCCTTTGGCATTGGT GATATTCCGCTGGGCTGCCTGGCCTATGCCTGGTTTAACTTACCGATCGAGCGCCCGGAATTACCGCATTTACAGCGCTG GTATCAGAGCCTGACGCAAAGAATAGCCTTCCAAAAAGTGATTGCGATTGGTTTGAGTTAA
Upstream 100 bases:
>100_bases GATTTTACTCGCACGGTTATCGATATCGGTGACCGGGCATGGAAATTTGTGCTGTTTTCTCTTTGTCGCCATATTTTTTT GTCACGATATAGGGGGTTGC
Downstream 100 bases:
>100_bases TACTCTTCTTTTATTCCAAAACACCTTGGCATTGCTGGTCAAAATCCCGAATCACTTACTTATTTTAAAGTCAACAACCA GTAAGTGATTCGGGTAAGTG
Product: putative glutathione S-transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MLTVWGRNNSTNVKKVLWCLEELGIPYQRIDVGGQYGKLNDPQYRALNPNGLIPCLQDKDFILWESNTIVRYLAAQYGQN SLYLADHHQRASAEKWMDWATSSVVEPFKAVFIGLVRTPPEQQDKVKIAQGMEKMNTLMSIANDALGEQAYLSGDAFGIG DIPLGCLAYAWFNLPIERPELPHLQRWYQSLTQRIAFQKVIAIGLS
Sequences:
>Translated_206_residues MLTVWGRNNSTNVKKVLWCLEELGIPYQRIDVGGQYGKLNDPQYRALNPNGLIPCLQDKDFILWESNTIVRYLAAQYGQN SLYLADHHQRASAEKWMDWATSSVVEPFKAVFIGLVRTPPEQQDKVKIAQGMEKMNTLMSIANDALGEQAYLSGDAFGIG DIPLGCLAYAWFNLPIERPELPHLQRWYQSLTQRIAFQKVIAIGLS >Mature_206_residues MLTVWGRNNSTNVKKVLWCLEELGIPYQRIDVGGQYGKLNDPQYRALNPNGLIPCLQDKDFILWESNTIVRYLAAQYGQN SLYLADHHQRASAEKWMDWATSSVVEPFKAVFIGLVRTPPEQQDKVKIAQGMEKMNTLMSIANDALGEQAYLSGDAFGIG DIPLGCLAYAWFNLPIERPELPHLQRWYQSLTQRIAFQKVIAIGLS
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87081789, Length=208, Percent_Identity=48.5576923076923, Blast_Score=197, Evalue=4e-52, Organism=Drosophila melanogaster, GI17864596, Length=190, Percent_Identity=24.7368421052632, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI24654975, Length=196, Percent_Identity=27.0408163265306, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24654983, Length=212, Percent_Identity=27.3584905660377, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI17864598, Length=183, Percent_Identity=24.5901639344262, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 23345; Mature: 23345
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTVWGRNNSTNVKKVLWCLEELGIPYQRIDVGGQYGKLNDPQYRALNPNGLIPCLQDKD CEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECCCCCEECCCCCC FILWESNTIVRYLAAQYGQNSLYLADHHQRASAEKWMDWATSSVVEPFKAVFIGLVRTPP EEEEECCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EQQDKVKIAQGMEKMNTLMSIANDALGEQAYLSGDAFGIGDIPLGCLAYAWFNLPIERPE CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCHHHHHHHHHCCCCCCCC LPHLQRWYQSLTQRIAFQKVIAIGLS CHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLTVWGRNNSTNVKKVLWCLEELGIPYQRIDVGGQYGKLNDPQYRALNPNGLIPCLQDKD CEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECCCCCEECCCCCC FILWESNTIVRYLAAQYGQNSLYLADHHQRASAEKWMDWATSSVVEPFKAVFIGLVRTPP EEEEECCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EQQDKVKIAQGMEKMNTLMSIANDALGEQAYLSGDAFGIGDIPLGCLAYAWFNLPIERPE CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCHHHHHHHHHCCCCCCCC LPHLQRWYQSLTQRIAFQKVIAIGLS CHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]