| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is uxuA [H]
Identifier: 218928434
GI number: 218928434
Start: 1441211
End: 1442404
Strand: Direct
Name: uxuA [H]
Synonym: YPO1283
Alternate gene names: 218928434
Gene position: 1441211-1442404 (Clockwise)
Preceding gene: 218928432
Following gene: 218928437
Centisome position: 30.97
GC content: 49.83
Gene sequence:
>1194_bases ATGGAACAAACATGGCGTTGGTATGGCCCGAATGATCCGGTGTCGTTAGATGATATCCGTCAAGCGGGTGCTACCGGAGT AGTCACGGCGTTACACCATATCCCGAATGGTGTTGTGTGGCCAGTCAGTGAGATCAAGCAGCGTCAGGCCGAATTAGCAG CTAAAAACCTGGTATGGTCTGTTGTGGAAAGTGTGCCTATTCATGAGGACATCAAAACTCATAGCGGTAACTATCAGCAA TACATTGAAAATTACCAACAAACACTGCGTAACATTGCAGAATGCGGTATTGACACCGTGTGCTACAACTTCATGCCGAT ACTGGACTGGACGCGTACTGATCTGGAATATGAATTACCAGACGGTTCTAAAGCGTTGCGTTTTGACCAGATAGCTTTTG CCGCTTTTGAGCTGCATATTCTAAAACGCCCTGGTGCCAGCAATGACTATACGGCGGAAGAACAAGTACAGGCAGAAGCG TATTTCAACGCGATGACTGAAGCTGATATTGCCAAGCTGACGGGCAATATTATTGCAGGTCTGCCAGGGGCTGAAGAGGG CTATACGCTGGATCAGTTCCGTGCTCGGTTGGCTGAGTACGATGGGATTGATAAAGCGCAACTGCGTGAGAACATGGCTT ACTTCCTGCGCGCTATCATTCCGGTGGCAGAACAAGTGGGCTTGCGTATGGCGGTGCACCCAGATGATCCACCGCGCCCA ATCCTTGGCCTACCGCGTATCGTTTCAACCATTGAAGATATGCAGTGGCTGAAAGAGACGGTGGATAGCATTCACAACGG TTTCACCATGTGTACCGGTTCGTATGGTGTGCGTGCTGATAACGATTTGGTGAAGATGATCGAAACCTTTGGCGATCGTA TTCACTTCACGCATTTGCGTTCCACCTGTCGTGAAGGAAATCCAAAAACCTTCCATGAAGGGGGGCATTTGCAAGGCGAT GTGGATATGTACTCGGTGGTAAAAGCCATTTTAACCGAAGAACAGCGCCGCCAGTCACTGGGGGATATGCGTCCAATACC TATGCGTCCGGACCATGGTCATCAGATGCTGGACGATTTGCACAAGAAAACCAATCCGGGCTACTCGGCAATTGGGCGTC TGAAAGGGCTGGCAGAAGTTCGTGGTGTGGAATTGGCACTGAAACGGACATTTTTCCCCGAGCTGAAGCAGTAG
Upstream 100 bases:
>100_bases CCGTTATCGGCAGAAAAGTCCGTTATCGGCAGAAAAAGGCGGCTTTAACCGTTAGCGGGTTAATTTTATTATTGTTGCGT ATGCAGAAGGTAAAAATAAA
Downstream 100 bases:
>100_bases TTTTGCACGATCAGTGAAGAGATAACCGTTAAGGGCCGGTTTCCGGCTCTTAACGTAGAGAGACCCAATAGATTCAAGTT GCAGAAGGGCGGCCAGCAAG
Product: mannonate dehydratase
Products: NA
Alternate protein names: D-mannonate hydrolase [H]
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MEQTWRWYGPNDPVSLDDIRQAGATGVVTALHHIPNGVVWPVSEIKQRQAELAAKNLVWSVVESVPIHEDIKTHSGNYQQ YIENYQQTLRNIAECGIDTVCYNFMPILDWTRTDLEYELPDGSKALRFDQIAFAAFELHILKRPGASNDYTAEEQVQAEA YFNAMTEADIAKLTGNIIAGLPGAEEGYTLDQFRARLAEYDGIDKAQLRENMAYFLRAIIPVAEQVGLRMAVHPDDPPRP ILGLPRIVSTIEDMQWLKETVDSIHNGFTMCTGSYGVRADNDLVKMIETFGDRIHFTHLRSTCREGNPKTFHEGGHLQGD VDMYSVVKAILTEEQRRQSLGDMRPIPMRPDHGHQMLDDLHKKTNPGYSAIGRLKGLAEVRGVELALKRTFFPELKQ
Sequences:
>Translated_397_residues MEQTWRWYGPNDPVSLDDIRQAGATGVVTALHHIPNGVVWPVSEIKQRQAELAAKNLVWSVVESVPIHEDIKTHSGNYQQ YIENYQQTLRNIAECGIDTVCYNFMPILDWTRTDLEYELPDGSKALRFDQIAFAAFELHILKRPGASNDYTAEEQVQAEA YFNAMTEADIAKLTGNIIAGLPGAEEGYTLDQFRARLAEYDGIDKAQLRENMAYFLRAIIPVAEQVGLRMAVHPDDPPRP ILGLPRIVSTIEDMQWLKETVDSIHNGFTMCTGSYGVRADNDLVKMIETFGDRIHFTHLRSTCREGNPKTFHEGGHLQGD VDMYSVVKAILTEEQRRQSLGDMRPIPMRPDHGHQMLDDLHKKTNPGYSAIGRLKGLAEVRGVELALKRTFFPELKQ >Mature_397_residues MEQTWRWYGPNDPVSLDDIRQAGATGVVTALHHIPNGVVWPVSEIKQRQAELAAKNLVWSVVESVPIHEDIKTHSGNYQQ YIENYQQTLRNIAECGIDTVCYNFMPILDWTRTDLEYELPDGSKALRFDQIAFAAFELHILKRPGASNDYTAEEQVQAEA YFNAMTEADIAKLTGNIIAGLPGAEEGYTLDQFRARLAEYDGIDKAQLRENMAYFLRAIIPVAEQVGLRMAVHPDDPPRP ILGLPRIVSTIEDMQWLKETVDSIHNGFTMCTGSYGVRADNDLVKMIETFGDRIHFTHLRSTCREGNPKTFHEGGHLQGD VDMYSVVKAILTEEQRRQSLGDMRPIPMRPDHGHQMLDDLHKKTNPGYSAIGRLKGLAEVRGVELALKRTFFPELKQ
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG1312
COG function: function code G; D-mannonate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannonate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI1790778, Length=392, Percent_Identity=78.5714285714286, Blast_Score=648, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004628 - InterPro: IPR013022 [H]
Pfam domain/function: PF03786 UxuA [H]
EC number: =4.2.1.8 [H]
Molecular weight: Translated: 44890; Mature: 44890
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQTWRWYGPNDPVSLDDIRQAGATGVVTALHHIPNGVVWPVSEIKQRQAELAAKNLVWS CCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHH VVESVPIHEDIKTHSGNYQQYIENYQQTLRNIAECGIDTVCYNFMPILDWTRTDLEYELP HHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCEEECC DGSKALRFDQIAFAAFELHILKRPGASNDYTAEEQVQAEAYFNAMTEADIAKLTGNIIAG CCCCHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCC LPGAEEGYTLDQFRARLAEYDGIDKAQLRENMAYFLRAIIPVAEQVGLRMAVHPDDPPRP CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC ILGLPRIVSTIEDMQWLKETVDSIHNGFTMCTGSYGVRADNDLVKMIETFGDRIHFTHLR CCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHCCCEEHHHHH STCREGNPKTFHEGGHLQGDVDMYSVVKAILTEEQRRQSLGDMRPIPMRPDHGHQMLDDL HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH HKKTNPGYSAIGRLKGLAEVRGVELALKRTFFPELKQ HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MEQTWRWYGPNDPVSLDDIRQAGATGVVTALHHIPNGVVWPVSEIKQRQAELAAKNLVWS CCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHH VVESVPIHEDIKTHSGNYQQYIENYQQTLRNIAECGIDTVCYNFMPILDWTRTDLEYELP HHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCEEECC DGSKALRFDQIAFAAFELHILKRPGASNDYTAEEQVQAEAYFNAMTEADIAKLTGNIIAG CCCCHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCC LPGAEEGYTLDQFRARLAEYDGIDKAQLRENMAYFLRAIIPVAEQVGLRMAVHPDDPPRP CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC ILGLPRIVSTIEDMQWLKETVDSIHNGFTMCTGSYGVRADNDLVKMIETFGDRIHFTHLR CCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHCCCEEHHHHH STCREGNPKTFHEGGHLQGDVDMYSVVKAILTEEQRRQSLGDMRPIPMRPDHGHQMLDDL HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH HKKTNPGYSAIGRLKGLAEVRGVELALKRTFFPELKQ HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA