| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218928399
Identifier: 218928399
GI number: 218928399
Start: 1402283
End: 1403776
Strand: Direct
Name: 218928399
Synonym: YPO1245
Alternate gene names: NA
Gene position: 1402283-1403776 (Clockwise)
Preceding gene: 218928398
Following gene: 218928400
Centisome position: 30.13
GC content: 41.9
Gene sequence:
>1494_bases ATGACTGAGATATTTGATTTTGACCTGGCTATCGATGCTCAGGTCACTGAATCAGTGAGTCAAATGAATAAGGCAATAAA AGCATTAGTGCCTCAATTTAATGAATTACGTAAAAGTGTGGAAGCGATTAATCACGTTATCCCCTTGTTCATTATGCGGA TAGAAGGATTTCATAATGAATACGGCAACATAAGTGGGGGGACCAGAACATCTTCGGACAATAGCTTAATGACAAGTATT GCTAACATTGCTAATAGCTATATAACAGGAGGGAAATTTAATCTTATTTATACGATTGGTTCTGAATTTGCCAGTGCAGT CAGCCAGGCAGCCAGCGAAGCCCGAACGGTAAATAAAGTCACGCAAAATGCGGGTGCACCTATTGATCAATTCAGTCAAC TATATGGGGCGATGCAAATTCGTGGTACAGACCAAGAAGCCGCAATAAAATCGACTGAACGGCTCTATAACACGTTTAAT AATATACTTTGGCGACGTGATGAGCAGGGTTGGAATCTGTTACAAGATTATGGTTTAGACATTGCCAGTAATAAAAATGG AACAGTGGATGCTCCTACTACGTTGACGAATATGGCTAAAGAATTTCCACAAATGGCACCACAGGACCAACACCAACTGA TCCATATTCTCAGAATGGACTCTAATGCTATTGAGTTATTGCGCGAGGGGGGGCAGCTAACGGATTTACTGGCTAAATCA AGACAATATGGCCTAACGATTGATCCTCAACTTAATGCCCGATTAACTGAGTTAAACATACGAACGAATGAATTAAGTAT GGCTTGGGATGGCCTCAAAGGTAAGGCATCGAATAAGCTTTACGATGTATTGTTCTCTGACGGTACGATTGCCGACGGAA TAGGTGGCCTTACCGACATGATAACTTATGGCCCAGATAACTTTTCGATTATGCGTACCCTAGGGGTAACCCAAGGGATT GATACGGATAAAATGCGTCGGGGTTATAACGATGCTGATTTTTATCAGCAACTTAATTTTTATGAAAAAGCCATGCTTAG TGCGGGACTGATGACCGATGGATTTCGTAAAAAATATCAGGGAAATAATGAAGAGAAAAATGCGACTTCGGCAGTTAATG CAGTGGCAATTAATACTGTGGCCATTAATAGCGACATTCCTGAATTCAATCTAGGAAAAGATCTGTTTAATTTTGGGGCT GAAACCGAAAATACTTGGAAAAATAACTGGCTTACAGATATTCACGCGGAAGAACCCTCATCCGACTTTGGCTATAATGA TATTGACATCAATCCTGTCAATCTATCACTTATTTCCCCTGAATCAGCGGGTGACTTTAACGGCAACGCTATTGCTGATG TCATTGCCACCGCAATGCAAAATAACCGGGTGCAAATTGAGCTGACATTAATCGACAGCCGGACTGGTGAAACTTCGCTG ATCCAAGCGCAGGGCGGGGCCAGAATTGCCCACGCCATGGAACTCGGTCATTAA
Upstream 100 bases:
>100_bases TATAGCTGGGGGCCGGGCGATGCCTGGTCCCTGACCTACAGTGGATTAAGGTGGTGGTGCCAGCAGGCCGAGCGGATTAA TAATATTAAGGCTGGCAAAA
Downstream 100 bases:
>100_bases TTTAAGTAAAAACGCAATGTAGTCAACCCGCCCCTGTGGGTTTCAGACTGCTGACAAACCCCGATGACGCGATCTTGAAC GGTGAGGATAGGCAGAGGAG
Product: putative bacteriophage coat protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 497; Mature: 496
Protein sequence:
>497_residues MTEIFDFDLAIDAQVTESVSQMNKAIKALVPQFNELRKSVEAINHVIPLFIMRIEGFHNEYGNISGGTRTSSDNSLMTSI ANIANSYITGGKFNLIYTIGSEFASAVSQAASEARTVNKVTQNAGAPIDQFSQLYGAMQIRGTDQEAAIKSTERLYNTFN NILWRRDEQGWNLLQDYGLDIASNKNGTVDAPTTLTNMAKEFPQMAPQDQHQLIHILRMDSNAIELLREGGQLTDLLAKS RQYGLTIDPQLNARLTELNIRTNELSMAWDGLKGKASNKLYDVLFSDGTIADGIGGLTDMITYGPDNFSIMRTLGVTQGI DTDKMRRGYNDADFYQQLNFYEKAMLSAGLMTDGFRKKYQGNNEEKNATSAVNAVAINTVAINSDIPEFNLGKDLFNFGA ETENTWKNNWLTDIHAEEPSSDFGYNDIDINPVNLSLISPESAGDFNGNAIADVIATAMQNNRVQIELTLIDSRTGETSL IQAQGGARIAHAMELGH
Sequences:
>Translated_497_residues MTEIFDFDLAIDAQVTESVSQMNKAIKALVPQFNELRKSVEAINHVIPLFIMRIEGFHNEYGNISGGTRTSSDNSLMTSI ANIANSYITGGKFNLIYTIGSEFASAVSQAASEARTVNKVTQNAGAPIDQFSQLYGAMQIRGTDQEAAIKSTERLYNTFN NILWRRDEQGWNLLQDYGLDIASNKNGTVDAPTTLTNMAKEFPQMAPQDQHQLIHILRMDSNAIELLREGGQLTDLLAKS RQYGLTIDPQLNARLTELNIRTNELSMAWDGLKGKASNKLYDVLFSDGTIADGIGGLTDMITYGPDNFSIMRTLGVTQGI DTDKMRRGYNDADFYQQLNFYEKAMLSAGLMTDGFRKKYQGNNEEKNATSAVNAVAINTVAINSDIPEFNLGKDLFNFGA ETENTWKNNWLTDIHAEEPSSDFGYNDIDINPVNLSLISPESAGDFNGNAIADVIATAMQNNRVQIELTLIDSRTGETSL IQAQGGARIAHAMELGH >Mature_496_residues TEIFDFDLAIDAQVTESVSQMNKAIKALVPQFNELRKSVEAINHVIPLFIMRIEGFHNEYGNISGGTRTSSDNSLMTSIA NIANSYITGGKFNLIYTIGSEFASAVSQAASEARTVNKVTQNAGAPIDQFSQLYGAMQIRGTDQEAAIKSTERLYNTFNN ILWRRDEQGWNLLQDYGLDIASNKNGTVDAPTTLTNMAKEFPQMAPQDQHQLIHILRMDSNAIELLREGGQLTDLLAKSR QYGLTIDPQLNARLTELNIRTNELSMAWDGLKGKASNKLYDVLFSDGTIADGIGGLTDMITYGPDNFSIMRTLGVTQGID TDKMRRGYNDADFYQQLNFYEKAMLSAGLMTDGFRKKYQGNNEEKNATSAVNAVAINTVAINSDIPEFNLGKDLFNFGAE TENTWKNNWLTDIHAEEPSSDFGYNDIDINPVNLSLISPESAGDFNGNAIADVIATAMQNNRVQIELTLIDSRTGETSLI QAQGGARIAHAMELGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54783; Mature: 54652
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEIFDFDLAIDAQVTESVSQMNKAIKALVPQFNELRKSVEAINHVIPLFIMRIEGFHNE CCCEEEECEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YGNISGGTRTSSDNSLMTSIANIANSYITGGKFNLIYTIGSEFASAVSQAASEARTVNKV CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH TQNAGAPIDQFSQLYGAMQIRGTDQEAAIKSTERLYNTFNNILWRRDEQGWNLLQDYGLD HHHCCCCHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCE IASNKNGTVDAPTTLTNMAKEFPQMAPQDQHQLIHILRMDSNAIELLREGGQLTDLLAKS EECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHEEHHHHCCCHHHHHHHCCCHHHHHHHHH RQYGLTIDPQLNARLTELNIRTNELSMAWDGLKGKASNKLYDVLFSDGTIADGIGGLTDM HCCCEEECCCCCCEEEEEEEEECHHEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHH ITYGPDNFSIMRTLGVTQGIDTDKMRRGYNDADFYQQLNFYEKAMLSAGLMTDGFRKKYQ HEECCCCHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC GNNEEKNATSAVNAVAINTVAINSDIPEFNLGKDLFNFGAETENTWKNNWLTDIHAEEPS CCCCCCHHHHHHHEEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCC SDFGYNDIDINPVNLSLISPESAGDFNGNAIADVIATAMQNNRVQIELTLIDSRTGETSL CCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCEE IQAQGGARIAHAMELGH EEECCCCHHHHHHHCCC >Mature Secondary Structure TEIFDFDLAIDAQVTESVSQMNKAIKALVPQFNELRKSVEAINHVIPLFIMRIEGFHNE CCEEEECEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YGNISGGTRTSSDNSLMTSIANIANSYITGGKFNLIYTIGSEFASAVSQAASEARTVNKV CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH TQNAGAPIDQFSQLYGAMQIRGTDQEAAIKSTERLYNTFNNILWRRDEQGWNLLQDYGLD HHHCCCCHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCE IASNKNGTVDAPTTLTNMAKEFPQMAPQDQHQLIHILRMDSNAIELLREGGQLTDLLAKS EECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHEEHHHHCCCHHHHHHHCCCHHHHHHHHH RQYGLTIDPQLNARLTELNIRTNELSMAWDGLKGKASNKLYDVLFSDGTIADGIGGLTDM HCCCEEECCCCCCEEEEEEEEECHHEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHH ITYGPDNFSIMRTLGVTQGIDTDKMRRGYNDADFYQQLNFYEKAMLSAGLMTDGFRKKYQ HEECCCCHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC GNNEEKNATSAVNAVAINTVAINSDIPEFNLGKDLFNFGAETENTWKNNWLTDIHAEEPS CCCCCCHHHHHHHEEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCC SDFGYNDIDINPVNLSLISPESAGDFNGNAIADVIATAMQNNRVQIELTLIDSRTGETSL CCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCEE IQAQGGARIAHAMELGH EEECCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA