| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218927386
Identifier: 218927386
GI number: 218927386
Start: 196573
End: 197004
Strand: Direct
Name: 218927386
Synonym: YPO0177
Alternate gene names: NA
Gene position: 196573-197004 (Clockwise)
Preceding gene: 218927385
Following gene: 218927390
Centisome position: 4.22
GC content: 33.8
Gene sequence:
>432_bases ATGAAATATTTAATACTTGGGGGGTATACAGTCGTGGCTAATAAAAACAAAATATCGGTTGCCTGTGGGGCGATATCATT GTTTGTTGTCGCCTCATTTTCTTTGTTTTTCTCATTAACTCATTATTTTAATTTTTTTAAAATGAATGATGAAGTGCATT TCTCTTGGGCTGTATCTTTGTTGTTATCTGGTTCACCATTATTATTTTATTTATCTGTGGTCTCTGGTGGGTATATCATC GGATATGAAAAAATATATAATGATCGTGTCGGTAAGATACTTGCGTACATAGCTGTTCTGGGGATGGTTTTTAGTCTGTT TTTTTCTTTTTATGTGGATTCTTCTTTAAAAGAAGCTGGGTATTTAAAGTGCGAAAGGAAATCTTTTATCGCGCCCAATA AGTATGTAATCGACCTGAAATTATGCCGTTAG
Upstream 100 bases:
>100_bases ACAGCTTTGAGGTACGCGAAGTCGCGTAAATGGTGAACCACCCATAGCCCGGTTTGGTTATGGGTTTTTAGGCCAAAATA ACAGCGCTCACCTCATCCAG
Downstream 100 bases:
>100_bases GCAAAGCTTGGTTGTTGTTAAAGATGAATTTTTTAACGGACTCGATGCCGTCATAAAAGTGATATTTAACGGCTACGCTG ATGCCACTTAAAAATGAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKYLILGGYTVVANKNKISVACGAISLFVVASFSLFFSLTHYFNFFKMNDEVHFSWAVSLLLSGSPLLFYLSVVSGGYII GYEKIYNDRVGKILAYIAVLGMVFSLFFSFYVDSSLKEAGYLKCERKSFIAPNKYVIDLKLCR
Sequences:
>Translated_143_residues MKYLILGGYTVVANKNKISVACGAISLFVVASFSLFFSLTHYFNFFKMNDEVHFSWAVSLLLSGSPLLFYLSVVSGGYII GYEKIYNDRVGKILAYIAVLGMVFSLFFSFYVDSSLKEAGYLKCERKSFIAPNKYVIDLKLCR >Mature_143_residues MKYLILGGYTVVANKNKISVACGAISLFVVASFSLFFSLTHYFNFFKMNDEVHFSWAVSLLLSGSPLLFYLSVVSGGYII GYEKIYNDRVGKILAYIAVLGMVFSLFFSFYVDSSLKEAGYLKCERKSFIAPNKYVIDLKLCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16133; Mature: 16133
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLILGGYTVVANKNKISVACGAISLFVVASFSLFFSLTHYFNFFKMNDEVHFSWAVSL CEEEEEECEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEHHHHHHH LLSGSPLLFYLSVVSGGYIIGYEKIYNDRVGKILAYIAVLGMVFSLFFSFYVDSSLKEAG HHCCCCHHHHEEHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC YLKCERKSFIAPNKYVIDLKLCR CEEECCCCCCCCCEEEEEEEECC >Mature Secondary Structure MKYLILGGYTVVANKNKISVACGAISLFVVASFSLFFSLTHYFNFFKMNDEVHFSWAVSL CEEEEEECEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEHHHHHHH LLSGSPLLFYLSVVSGGYIIGYEKIYNDRVGKILAYIAVLGMVFSLFFSFYVDSSLKEAG HHCCCCHHHHEEHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC YLKCERKSFIAPNKYVIDLKLCR CEEECCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA