| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218927299
Identifier: 218927299
GI number: 218927299
Start: 90732
End: 91550
Strand: Reverse
Name: 218927299
Synonym: YPO0080
Alternate gene names: NA
Gene position: 91550-90732 (Counterclockwise)
Preceding gene: 218927300
Following gene: 218927293
Centisome position: 1.97
GC content: 48.23
Gene sequence:
>819_bases GTGGCCTGTCTTTTGGCGCAATATAATAGCGGAGATATATTAATGAAATATTCTAACGTGATTGTATCGGGCCTGTGTAT GAGTATGGTCAGCCTGGCAACGGCAGCACCAACAGAGGTTCCATCCGACGAGCCAGTGACCCTACGGATCATTTCGTCGA TGGCCACTCGACAGTTCTTGACCGAGGTTATCGCGCAATTTGCGCAACAATCAAAATACCAGGTCGAGCTCGAGTCAGTG GGAGGAGTGGATGCCACTAAACGCGTAGAAGCTGGCGAAGCTTTTGACGTGGTGATCCTGTCTGCCAATGCAATCGATAA ACTGATTGATTCAGGTAAGATTTTACCTAATAGTCGCATTGACCTGGTTAAGTCAGGCGTGGCTATCGCGGTGAAAGAAG GGGCACAGATAATGGATGTTAGCAGCGAGGAAACGGTAAAACAGGCTGTTTTAGCGGCCAATACGATCGCTTACTCAACA GGCCCTAGCGGCGTGTACCTGACTGAGGTTTTCGAGCACTGGGGCATTGCCGAACAAATCAAAGATCGCATTGTAAAAGT CCCACCAGGAGTCCCTGTCGGTTCTCTGGTAGCCAAGGGTGAAGTTGAACTTGGATTCCAGCAACTCAGTGAACTGCTTC ATTTAAAAGGCATTATCATACTTGGGCCTTTGCCCACGGATATTCAGATAATGACTCATTTTTCAGCAGGGGTCCCCCTT AAAACCAATCAGCAAAAAGCCATTAAGGTATTACTGGACTTCCTTGCATCGCCTGCGGCTACAGAGGCTAAAATCAAGAA TGGCATGGAGCCGATCTGA
Upstream 100 bases:
>100_bases GCAATTCCTGGGTTTTGTTAAGTAATATTGCTGACCAATCTATTTATTCAGCTAATTTAAACGTCGCTTAGCCACTGAAG ACAAGGTCATCCTGTTTTCG
Downstream 100 bases:
>100_bases ACGTAAAATTGAGCTTTCGACCTCAGTTTTGCTATTTACTCGTTTTGCTATGAGCGCTGTTGCAAGCAGCGCGGTAGCGA TAAACGTTCAACACCACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: PROX Protein; ABC Transporter Periplasmic Molybdate; ABC Transporter
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MACLLAQYNSGDILMKYSNVIVSGLCMSMVSLATAAPTEVPSDEPVTLRIISSMATRQFLTEVIAQFAQQSKYQVELESV GGVDATKRVEAGEAFDVVILSANAIDKLIDSGKILPNSRIDLVKSGVAIAVKEGAQIMDVSSEETVKQAVLAANTIAYST GPSGVYLTEVFEHWGIAEQIKDRIVKVPPGVPVGSLVAKGEVELGFQQLSELLHLKGIIILGPLPTDIQIMTHFSAGVPL KTNQQKAIKVLLDFLASPAATEAKIKNGMEPI
Sequences:
>Translated_272_residues MACLLAQYNSGDILMKYSNVIVSGLCMSMVSLATAAPTEVPSDEPVTLRIISSMATRQFLTEVIAQFAQQSKYQVELESV GGVDATKRVEAGEAFDVVILSANAIDKLIDSGKILPNSRIDLVKSGVAIAVKEGAQIMDVSSEETVKQAVLAANTIAYST GPSGVYLTEVFEHWGIAEQIKDRIVKVPPGVPVGSLVAKGEVELGFQQLSELLHLKGIIILGPLPTDIQIMTHFSAGVPL KTNQQKAIKVLLDFLASPAATEAKIKNGMEPI >Mature_271_residues ACLLAQYNSGDILMKYSNVIVSGLCMSMVSLATAAPTEVPSDEPVTLRIISSMATRQFLTEVIAQFAQQSKYQVELESVG GVDATKRVEAGEAFDVVILSANAIDKLIDSGKILPNSRIDLVKSGVAIAVKEGAQIMDVSSEETVKQAVLAANTIAYSTG PSGVYLTEVFEHWGIAEQIKDRIVKVPPGVPVGSLVAKGEVELGFQQLSELLHLKGIIILGPLPTDIQIMTHFSAGVPLK TNQQKAIKVLLDFLASPAATEAKIKNGMEPI
Specific function: Unknown
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28962; Mature: 28831
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACLLAQYNSGDILMKYSNVIVSGLCMSMVSLATAAPTEVPSDEPVTLRIISSMATRQFL CEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHH TEVIAQFAQQSKYQVELESVGGVDATKRVEAGEAFDVVILSANAIDKLIDSGKILPNSRI HHHHHHHHHCCCEEEEEHHCCCCCCHHHCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCCH DLVKSGVAIAVKEGAQIMDVSSEETVKQAVLAANTIAYSTGPSGVYLTEVFEHWGIAEQI HHHHCCEEEEEECCCEEEECCCHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCHHHHH KDRIVKVPPGVPVGSLVAKGEVELGFQQLSELLHLKGIIILGPLPTDIQIMTHFSAGVPL HHCEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEECCCCCCC KTNQQKAIKVLLDFLASPAATEAKIKNGMEPI CCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCC >Mature Secondary Structure ACLLAQYNSGDILMKYSNVIVSGLCMSMVSLATAAPTEVPSDEPVTLRIISSMATRQFL EEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHH TEVIAQFAQQSKYQVELESVGGVDATKRVEAGEAFDVVILSANAIDKLIDSGKILPNSRI HHHHHHHHHCCCEEEEEHHCCCCCCHHHCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCCH DLVKSGVAIAVKEGAQIMDVSSEETVKQAVLAANTIAYSTGPSGVYLTEVFEHWGIAEQI HHHHCCEEEEEECCCEEEECCCHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCHHHHH KDRIVKVPPGVPVGSLVAKGEVELGFQQLSELLHLKGIIILGPLPTDIQIMTHFSAGVPL HHCEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEECCCCCCC KTNQQKAIKVLLDFLASPAATEAKIKNGMEPI CCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA