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The map label for this gene is rpoP

Identifier: 161751101

GI number: 161751101

Start: 372992

End: 373138

Strand: Direct

Name: rpoP

Synonym: ST0351

Alternate gene names: 161751101

Gene position: 372992-373138 (Clockwise)

Preceding gene: 15920551

Following gene: 15920555

Centisome position: 13.84

GC content: 36.05

Gene sequence:

>147_bases
ATGGCAAAATATAGGTGTGGTAACTGTTGGAGAGAATTTGATGATGAACAATTAAGAGCTCTTCCAGGTGTGAGATGTCC
TTATTGCGGCTATAAAATAATCTATATGGTAAGAAAACCTACAGTAAAGGTTGTTAAAGCGATCTAG

Upstream 100 bases:

>100_bases
CAGATTATCAGACATTCTCAAAGATTTTTATTGTATTTGGGATTTTTCAACTTTTCTGTTAACAGTTAGGTTTTTAATTA
TGAGGTTTTTATTATCTTTT

Downstream 100 bases:

>100_bases
CCTTATAAATCTGGGCAGATGTTTCTAAGATTATTCTGGCTCCTAATACTGAAGTTATTCCAGATGGATCATGAGGTGGT
GAAACTTCTACTACATCAAA

Product: DNA-directed RNA polymerase subunit P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 48; Mature: 47

Protein sequence:

>48_residues
MAKYRCGNCWREFDDEQLRALPGVRCPYCGYKIIYMVRKPTVKVVKAI

Sequences:

>Translated_48_residues
MAKYRCGNCWREFDDEQLRALPGVRCPYCGYKIIYMVRKPTVKVVKAI
>Mature_47_residues
AKYRCGNCWREFDDEQLRALPGVRCPYCGYKIIYMVRKPTVKVVKAI

Specific function: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates

COG id: COG1996

COG function: function code K; DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal rpoP/eukaryotic RPC10 RNA polymerase subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RPOP_SULTO (Q975R9)

Other databases:

- EMBL:   BA000023
- RefSeq:   NP_376222.2
- ProteinModelPortal:   Q975R9
- SMR:   Q975R9
- GeneID:   1458275
- GenomeReviews:   BA000023_GR
- KEGG:   sto:ST0351
- HOGENOM:   HBG553548
- ProtClustDB:   PRK00398
- BioCyc:   STOK273063:ST0351-MONOMER
- BRENDA:   2.7.7.6
- HAMAP:   MF_00615
- InterPro:   IPR006591
- SMART:   SM00659

Pfam domain/function: PF03604 DNA_RNApol_7kD

EC number: =2.7.7.6

Molecular weight: Translated: 5670; Mature: 5539

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
12.5 %Cys+Met (Translated Protein)
8.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
10.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKYRCGNCWREFDDEQLRALPGVRCPYCGYKIIYMVRKPTVKVVKAI
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEEECCCCHHHEECC
>Mature Secondary Structure 
AKYRCGNCWREFDDEQLRALPGVRCPYCGYKIIYMVRKPTVKVVKAI
CCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEEECCCCHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479