BacMap

Definition	Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession	NC_003106
Length	2,694,756

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The map label for this gene is hflB [C]

Identifier: 15922918

GI number: 15922918

Start: 2601471

End: 2603573

Strand: Direct

Name: hflB [C]

Synonym: ST2584

Alternate gene names: 15922918

Gene position: 2601471-2603573 (Clockwise)

Preceding gene: 15922915

Following gene: 15922920

Centisome position: 96.54

GC content: 36.28

Gene sequence:

>2103_bases
ATGATTTCGCAACAGTTTTTCTTTGTAAGAGTATACGAAGGAAGAGTTAAGCAAGATGTTGCTTTAGTCAGTAGTAATAT
TATGCAGTCTTATGGATTATTACCAGGTGATGTAATACTCCTTTTGGGAAATAGGCAAATTCCTTTTTATGTTCAAGAAA
GTTCCGATAACAAGATAGATGGTATCGTTATAGGCGAAAATAAACTTAAACTTTTAGGGATAAGAAGTGGTGAAAGAGTA
CCAGTTAGGAAAGTTTCAGTTTCCTCTATAAAAGAAATAACTTTGGCACCCTCAGAACAAAAGAATTACGATCTAAGAAA
ATTAAACTTAGAATTAAGAGGAAGATTAGTTACCAGAGGTATAACCTTAGAATCAAAAGAAGGAACTTTTGCAGTAATTT
CCTATTCCCCACAAGTGGAAGTTGGTTATATTTCGAGTGAGACTCGAATAAATATAGCTCCGGAATCAATCAGAATAGCT
CAGAAAAATATTCCTTATGTAACCCTTGATGATGTTGGTGGTTTATCAAAACAAATAAGGGAATTACTAGAAATAGTAGA
ATTAGCCTTAACAAAAGTAGAGGTAGCCAGGATGTTAGGTTTAAGACCGCCTAAAGGAGTACTCCTCTATGGTCCTCCAG
GTACTGGAAAGACTTTGATTGCAAAAGCTATTGCAAATACTATTATGGCTAACTTCTTTTATATAAGTGGTCCAGAAATA
GGCTCCAAATATTATGGTGAGAGTGAAAAAAGGCTAAGAGATATATTTGAGCAAGCTGAGAAAAATGCTCCATCCATAAT
TTTCGTAGACGAAATAGATGCAATCGCACCTAATAGAGATACTACATCATCTGAGACTGACAGAAGGATTGTAGCACAGC
TATTAACATTAATGGATGGTTTGACTAGTGGCAGTGGAGTAGTGGTTATTGGTGCAACAAATAGACCAAATGCTCTAGAT
CCGGCCCTAAGAAGACCTGGTAGATTTGACAGAGAAATAGAAATTCCCGTTCCAGATAAGCAAGGAAGATTAGAAATATT
AAAAATACATACTAGGCGAGTTCCTTTATCACAAGAAGTAGACTTGGAAAAAATTGCTGAGAGGACCCATGGCTTCGTCG
GTGCTGATCTAGAGGCTTTAGTAAGGGAAGCAGTTCTGAGTGCTTATCATAGATGTAATGGTAATTTAGAATGTATGCAA
GTTACGATGAGTGATTTTGATGAAGCATTAAAGAATGTAGAACCTTCAGCACTAAGAGAATTCAGAATTGAAATACCTAA
TACTACATGGGAAGACATTGTAGGTTTAGAAGATATTAAACTAGAGCTAAAGGAAGTTGTAGAATGGCCATTAAAGGATC
CAGGGTTATATGAGGAAATGAAAGCAGAAATACCGTCTGGGATTCTTCTTTACGGACCACCCGGTACTGGAAAGACTATG
TTAGCTAGGGCTGTTGCACATGAAAGTGGTGCTAACTTTATTGCGATAAATGGGCCGGAATTAATGAGTATGTGGGTAGG
AGAGACTGAAAGGGCTATTAGAGAGGTATTTAAGAAAGCTAGACAATCCTCACCTACTATTATATTCTTTGATGAGATAG
ATGCAATAGCAGTTGCAAGGGGTGCTGATCCAAATAAAGTAACTGATAGGATTGTTAGCCAATTATTAACTGAAATGGAT
GGGATAAGCAAAAGGAGGGAAAAAGTAGTTATCATAGCTGCAACTAACAGACCAGACATAATAGACCCAGCTTTATTAAG
ACCCGGGAGATTAGAAAAGTTAATTTATGTTCCCCCACCAGATTATCAGACTAGGATAGCTTTGTTCTCAAGGCTCATAA
ATAATAGACCTCATGAGGAAATTGATATTGAAAGATTAGCTAAATTAACTGAAAATTATACGCCAGCTGAGATTAAAGGA
ATAGTGAATAAGGCTGTATTATTAGCAATTAGAAGAGCAAAACTAAAGAACGAAAAACCTGAGCTCACAATGAGTGATTT
TGAAGAAGCTTTGAAGACTGTAAAACCTATTGTTACTCAGACTATGTTAGATTATTATGTCTCATTCTATCAAAGAGTAA
GGAGAGCAAGTGGATATGCTTGA

Upstream 100 bases:

>100_bases
ATTTCTCGTATCATTTATTTCTGTTGATCTAGTAACACTTCATTACAAACGTGTTATATAATTATTTAAATTGTTAGATG
ATATAGTATTTAAAGATACT

Downstream 100 bases:

>100_bases
ACATTTCGTTATATTTGGATTAATGGCTTATTCTCTAGTATTTTCTGGAGTATTCACACTTATTTTACTCGGAATTAGTG
AGAACGAGATAATCGAATCT

Product: cell division control protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 700; Mature: 700

Protein sequence:

>700_residues
MISQQFFFVRVYEGRVKQDVALVSSNIMQSYGLLPGDVILLLGNRQIPFYVQESSDNKIDGIVIGENKLKLLGIRSGERV
PVRKVSVSSIKEITLAPSEQKNYDLRKLNLELRGRLVTRGITLESKEGTFAVISYSPQVEVGYISSETRINIAPESIRIA
QKNIPYVTLDDVGGLSKQIRELLEIVELALTKVEVARMLGLRPPKGVLLYGPPGTGKTLIAKAIANTIMANFFYISGPEI
GSKYYGESEKRLRDIFEQAEKNAPSIIFVDEIDAIAPNRDTTSSETDRRIVAQLLTLMDGLTSGSGVVVIGATNRPNALD
PALRRPGRFDREIEIPVPDKQGRLEILKIHTRRVPLSQEVDLEKIAERTHGFVGADLEALVREAVLSAYHRCNGNLECMQ
VTMSDFDEALKNVEPSALREFRIEIPNTTWEDIVGLEDIKLELKEVVEWPLKDPGLYEEMKAEIPSGILLYGPPGTGKTM
LARAVAHESGANFIAINGPELMSMWVGETERAIREVFKKARQSSPTIIFFDEIDAIAVARGADPNKVTDRIVSQLLTEMD
GISKRREKVVIIAATNRPDIIDPALLRPGRLEKLIYVPPPDYQTRIALFSRLINNRPHEEIDIERLAKLTENYTPAEIKG
IVNKAVLLAIRRAKLKNEKPELTMSDFEEALKTVKPIVTQTMLDYYVSFYQRVRRASGYA

Sequences:

>Translated_700_residues
MISQQFFFVRVYEGRVKQDVALVSSNIMQSYGLLPGDVILLLGNRQIPFYVQESSDNKIDGIVIGENKLKLLGIRSGERV
PVRKVSVSSIKEITLAPSEQKNYDLRKLNLELRGRLVTRGITLESKEGTFAVISYSPQVEVGYISSETRINIAPESIRIA
QKNIPYVTLDDVGGLSKQIRELLEIVELALTKVEVARMLGLRPPKGVLLYGPPGTGKTLIAKAIANTIMANFFYISGPEI
GSKYYGESEKRLRDIFEQAEKNAPSIIFVDEIDAIAPNRDTTSSETDRRIVAQLLTLMDGLTSGSGVVVIGATNRPNALD
PALRRPGRFDREIEIPVPDKQGRLEILKIHTRRVPLSQEVDLEKIAERTHGFVGADLEALVREAVLSAYHRCNGNLECMQ
VTMSDFDEALKNVEPSALREFRIEIPNTTWEDIVGLEDIKLELKEVVEWPLKDPGLYEEMKAEIPSGILLYGPPGTGKTM
LARAVAHESGANFIAINGPELMSMWVGETERAIREVFKKARQSSPTIIFFDEIDAIAVARGADPNKVTDRIVSQLLTEMD
GISKRREKVVIIAATNRPDIIDPALLRPGRLEKLIYVPPPDYQTRIALFSRLINNRPHEEIDIERLAKLTENYTPAEIKG
IVNKAVLLAIRRAKLKNEKPELTMSDFEEALKTVKPIVTQTMLDYYVSFYQRVRRASGYA
>Mature_700_residues
MISQQFFFVRVYEGRVKQDVALVSSNIMQSYGLLPGDVILLLGNRQIPFYVQESSDNKIDGIVIGENKLKLLGIRSGERV
PVRKVSVSSIKEITLAPSEQKNYDLRKLNLELRGRLVTRGITLESKEGTFAVISYSPQVEVGYISSETRINIAPESIRIA
QKNIPYVTLDDVGGLSKQIRELLEIVELALTKVEVARMLGLRPPKGVLLYGPPGTGKTLIAKAIANTIMANFFYISGPEI
GSKYYGESEKRLRDIFEQAEKNAPSIIFVDEIDAIAPNRDTTSSETDRRIVAQLLTLMDGLTSGSGVVVIGATNRPNALD
PALRRPGRFDREIEIPVPDKQGRLEILKIHTRRVPLSQEVDLEKIAERTHGFVGADLEALVREAVLSAYHRCNGNLECMQ
VTMSDFDEALKNVEPSALREFRIEIPNTTWEDIVGLEDIKLELKEVVEWPLKDPGLYEEMKAEIPSGILLYGPPGTGKTM
LARAVAHESGANFIAINGPELMSMWVGETERAIREVFKKARQSSPTIIFFDEIDAIAVARGADPNKVTDRIVSQLLTEMD
GISKRREKVVIIAATNRPDIIDPALLRPGRLEKLIYVPPPDYQTRIALFSRLINNRPHEEIDIERLAKLTENYTPAEIKG
IVNKAVLLAIRRAKLKNEKPELTMSDFEEALKTVKPIVTQTMLDYYVSFYQRVRRASGYA

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]

Homologues:

Organism=Homo sapiens, GI6005942, Length=743, Percent_Identity=42.6648721399731, Blast_Score=541, Evalue=1e-153,
Organism=Homo sapiens, GI157671927, Length=568, Percent_Identity=48.943661971831, Blast_Score=524, Evalue=1e-148,
Organism=Homo sapiens, GI45643123, Length=588, Percent_Identity=42.1768707482993, Blast_Score=416, Evalue=1e-116,
Organism=Homo sapiens, GI45643125, Length=601, Percent_Identity=41.2645590682196, Blast_Score=416, Evalue=1e-116,
Organism=Homo sapiens, GI229577436, Length=647, Percent_Identity=38.7944358578053, Blast_Score=415, Evalue=1e-116,
Organism=Homo sapiens, GI4505725, Length=515, Percent_Identity=33.7864077669903, Blast_Score=278, Evalue=1e-74,
Organism=Homo sapiens, GI194018488, Length=522, Percent_Identity=34.0996168582375, Blast_Score=261, Evalue=2e-69,
Organism=Homo sapiens, GI24497618, Length=270, Percent_Identity=44.8148148148148, Blast_Score=219, Evalue=8e-57,
Organism=Homo sapiens, GI153792536, Length=270, Percent_Identity=42.5925925925926, Blast_Score=213, Evalue=5e-55,
Organism=Homo sapiens, GI24430151, Length=252, Percent_Identity=46.031746031746, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI195539395, Length=302, Percent_Identity=40.3973509933775, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI89064750, Length=252, Percent_Identity=44.8412698412698, Blast_Score=206, Evalue=6e-53,
Organism=Homo sapiens, GI5729991, Length=252, Percent_Identity=44.8412698412698, Blast_Score=206, Evalue=7e-53,
Organism=Homo sapiens, GI24430155, Length=252, Percent_Identity=44.8412698412698, Blast_Score=205, Evalue=9e-53,
Organism=Homo sapiens, GI24497435, Length=305, Percent_Identity=37.7049180327869, Blast_Score=202, Evalue=8e-52,
Organism=Homo sapiens, GI21361144, Length=253, Percent_Identity=41.897233201581, Blast_Score=200, Evalue=4e-51,
Organism=Homo sapiens, GI21327685, Length=223, Percent_Identity=45.2914798206278, Blast_Score=192, Evalue=1e-48,
Organism=Homo sapiens, GI7657689, Length=223, Percent_Identity=45.2914798206278, Blast_Score=192, Evalue=1e-48,
Organism=Homo sapiens, GI156564401, Length=449, Percent_Identity=33.630289532294, Blast_Score=191, Evalue=3e-48,
Organism=Homo sapiens, GI4506209, Length=227, Percent_Identity=43.1718061674009, Blast_Score=184, Evalue=4e-46,
Organism=Homo sapiens, GI31742536, Length=317, Percent_Identity=34.0694006309148, Blast_Score=182, Evalue=1e-45,
Organism=Homo sapiens, GI112789543, Length=317, Percent_Identity=34.0694006309148, Blast_Score=182, Evalue=1e-45,
Organism=Homo sapiens, GI300192933, Length=258, Percent_Identity=38.3720930232558, Blast_Score=180, Evalue=5e-45,
Organism=Homo sapiens, GI5901990, Length=272, Percent_Identity=41.9117647058824, Blast_Score=176, Evalue=7e-44,
Organism=Homo sapiens, GI7019569, Length=259, Percent_Identity=37.0656370656371, Blast_Score=173, Evalue=4e-43,
Organism=Homo sapiens, GI14149767, Length=272, Percent_Identity=40.0735294117647, Blast_Score=171, Evalue=2e-42,
Organism=Homo sapiens, GI62177112, Length=272, Percent_Identity=40.0735294117647, Blast_Score=171, Evalue=2e-42,
Organism=Homo sapiens, GI17865802, Length=235, Percent_Identity=37.4468085106383, Blast_Score=166, Evalue=7e-41,
Organism=Homo sapiens, GI4507173, Length=232, Percent_Identity=37.5, Blast_Score=163, Evalue=4e-40,
Organism=Homo sapiens, GI310125280, Length=269, Percent_Identity=38.6617100371747, Blast_Score=162, Evalue=1e-39,
Organism=Homo sapiens, GI310125282, Length=267, Percent_Identity=38.5767790262172, Blast_Score=161, Evalue=2e-39,
Organism=Homo sapiens, GI31377644, Length=228, Percent_Identity=42.1052631578947, Blast_Score=160, Evalue=4e-39,
Organism=Homo sapiens, GI40806170, Length=270, Percent_Identity=36.2962962962963, Blast_Score=157, Evalue=4e-38,
Organism=Homo sapiens, GI11875211, Length=270, Percent_Identity=36.2962962962963, Blast_Score=156, Evalue=5e-38,
Organism=Homo sapiens, GI226371754, Length=297, Percent_Identity=32.996632996633, Blast_Score=155, Evalue=2e-37,
Organism=Homo sapiens, GI64084766, Length=297, Percent_Identity=31.3131313131313, Blast_Score=141, Evalue=2e-33,
Organism=Homo sapiens, GI40806173, Length=141, Percent_Identity=39.7163120567376, Blast_Score=110, Evalue=5e-24,
Organism=Homo sapiens, GI116292174, Length=282, Percent_Identity=29.7872340425532, Blast_Score=98, Evalue=3e-20,
Organism=Homo sapiens, GI40255052, Length=236, Percent_Identity=26.6949152542373, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI11321607, Length=152, Percent_Identity=30.2631578947368, Blast_Score=74, Evalue=7e-13,
Organism=Escherichia coli, GI1789568, Length=256, Percent_Identity=45.703125, Blast_Score=204, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17532375, Length=574, Percent_Identity=47.212543554007, Blast_Score=531, Evalue=1e-151,
Organism=Caenorhabditis elegans, GI17531535, Length=746, Percent_Identity=40.4825737265416, Blast_Score=514, Evalue=1e-146,
Organism=Caenorhabditis elegans, GI17537217, Length=603, Percent_Identity=36.81592039801, Blast_Score=387, Evalue=1e-107,
Organism=Caenorhabditis elegans, GI17508053, Length=499, Percent_Identity=36.2725450901804, Blast_Score=286, Evalue=2e-77,
Organism=Caenorhabditis elegans, GI17563250, Length=289, Percent_Identity=43.2525951557093, Blast_Score=220, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI193206114, Length=275, Percent_Identity=45.4545454545455, Blast_Score=215, Evalue=7e-56,
Organism=Caenorhabditis elegans, GI133931034, Length=275, Percent_Identity=45.4545454545455, Blast_Score=215, Evalue=7e-56,
Organism=Caenorhabditis elegans, GI193206116, Length=275, Percent_Identity=45.4545454545455, Blast_Score=215, Evalue=8e-56,
Organism=Caenorhabditis elegans, GI71987364, Length=240, Percent_Identity=45, Blast_Score=214, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI71987372, Length=240, Percent_Identity=45, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17554786, Length=255, Percent_Identity=43.1372549019608, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI25153574, Length=463, Percent_Identity=29.5896328293737, Blast_Score=206, Evalue=5e-53,
Organism=Caenorhabditis elegans, GI17505546, Length=255, Percent_Identity=43.1372549019608, Blast_Score=201, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI25144278, Length=300, Percent_Identity=37.3333333333333, Blast_Score=201, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI25144281, Length=300, Percent_Identity=37.3333333333333, Blast_Score=201, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17508701, Length=253, Percent_Identity=39.9209486166008, Blast_Score=196, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI17562804, Length=454, Percent_Identity=31.057268722467, Blast_Score=194, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI17554784, Length=260, Percent_Identity=43.4615384615385, Blast_Score=194, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI193209502, Length=222, Percent_Identity=40.0900900900901, Blast_Score=184, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17563248, Length=227, Percent_Identity=42.2907488986784, Blast_Score=181, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI133901662, Length=420, Percent_Identity=32.8571428571429, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI71994521, Length=252, Percent_Identity=38.8888888888889, Blast_Score=177, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI133901658, Length=420, Percent_Identity=32.8571428571429, Blast_Score=177, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17554264, Length=230, Percent_Identity=42.6086956521739, Blast_Score=176, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI86561515, Length=316, Percent_Identity=33.5443037974684, Blast_Score=166, Evalue=4e-41,
Organism=Caenorhabditis elegans, GI17560432, Length=300, Percent_Identity=33.3333333333333, Blast_Score=165, Evalue=8e-41,
Organism=Caenorhabditis elegans, GI25146157, Length=264, Percent_Identity=39.7727272727273, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI17541226, Length=293, Percent_Identity=34.1296928327645, Blast_Score=159, Evalue=5e-39,
Organism=Caenorhabditis elegans, GI17541224, Length=274, Percent_Identity=34.3065693430657, Blast_Score=157, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI115534323, Length=259, Percent_Identity=37.8378378378378, Blast_Score=153, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI17508421, Length=269, Percent_Identity=39.4052044609665, Blast_Score=149, Evalue=5e-36,
Organism=Caenorhabditis elegans, GI32563584, Length=272, Percent_Identity=40.0735294117647, Blast_Score=148, Evalue=9e-36,
Organism=Caenorhabditis elegans, GI17570397, Length=125, Percent_Identity=38.4, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI32566590, Length=125, Percent_Identity=38.4, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71990294, Length=228, Percent_Identity=27.6315789473684, Blast_Score=70, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6320077, Length=619, Percent_Identity=45.718901453958, Blast_Score=535, Evalue=1e-152,
Organism=Saccharomyces cerevisiae, GI6323429, Length=563, Percent_Identity=44.9378330373002, Blast_Score=474, Evalue=1e-134,
Organism=Saccharomyces cerevisiae, GI6322994, Length=611, Percent_Identity=38.1342062193126, Blast_Score=410, Evalue=1e-115,
Organism=Saccharomyces cerevisiae, GI6324000, Length=490, Percent_Identity=32.8571428571429, Blast_Score=242, Evalue=1e-64,
Organism=Saccharomyces cerevisiae, GI6321709, Length=271, Percent_Identity=46.1254612546125, Blast_Score=225, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6324833, Length=225, Percent_Identity=49.7777777777778, Blast_Score=222, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6322651, Length=477, Percent_Identity=29.1404612159329, Blast_Score=211, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6321390, Length=255, Percent_Identity=43.1372549019608, Blast_Score=209, Evalue=1e-54,
Organism=Saccharomyces cerevisiae, GI6325281, Length=286, Percent_Identity=41.958041958042, Blast_Score=208, Evalue=2e-54,
Organism=Saccharomyces cerevisiae, GI6320197, Length=259, Percent_Identity=44.4015444015444, Blast_Score=200, Evalue=5e-52,
Organism=Saccharomyces cerevisiae, GI6324691, Length=253, Percent_Identity=41.897233201581, Blast_Score=198, Evalue=3e-51,
Organism=Saccharomyces cerevisiae, GI6320602, Length=249, Percent_Identity=44.1767068273092, Blast_Score=197, Evalue=3e-51,
Organism=Saccharomyces cerevisiae, GI6322704, Length=240, Percent_Identity=42.0833333333333, Blast_Score=187, Evalue=7e-48,
Organism=Saccharomyces cerevisiae, GI6323736, Length=252, Percent_Identity=39.6825396825397, Blast_Score=180, Evalue=6e-46,
Organism=Saccharomyces cerevisiae, GI6319554, Length=432, Percent_Identity=32.6388888888889, Blast_Score=179, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6325431, Length=300, Percent_Identity=34, Blast_Score=179, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6320854, Length=258, Percent_Identity=37.984496124031, Blast_Score=176, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6325183, Length=295, Percent_Identity=32.8813559322034, Blast_Score=167, Evalue=8e-42,
Organism=Saccharomyces cerevisiae, GI6321465, Length=224, Percent_Identity=42.4107142857143, Blast_Score=159, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6320887, Length=312, Percent_Identity=34.2948717948718, Blast_Score=155, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI9755327, Length=174, Percent_Identity=31.6091954022989, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6320583, Length=134, Percent_Identity=33.5820895522388, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI161076486, Length=577, Percent_Identity=47.313691507799, Blast_Score=545, Evalue=1e-155,
Organism=Drosophila melanogaster, GI17137560, Length=577, Percent_Identity=47.313691507799, Blast_Score=545, Evalue=1e-155,
Organism=Drosophila melanogaster, GI161076488, Length=577, Percent_Identity=47.313691507799, Blast_Score=544, Evalue=1e-154,
Organism=Drosophila melanogaster, GI19921202, Length=596, Percent_Identity=36.9127516778523, Blast_Score=374, Evalue=1e-103,
Organism=Drosophila melanogaster, GI24656825, Length=543, Percent_Identity=32.2283609576427, Blast_Score=262, Evalue=7e-70,
Organism=Drosophila melanogaster, GI24660075, Length=291, Percent_Identity=46.7353951890034, Blast_Score=260, Evalue=3e-69,
Organism=Drosophila melanogaster, GI281365776, Length=291, Percent_Identity=46.7353951890034, Blast_Score=260, Evalue=3e-69,
Organism=Drosophila melanogaster, GI45552965, Length=291, Percent_Identity=46.7353951890034, Blast_Score=259, Evalue=3e-69,
Organism=Drosophila melanogaster, GI24656820, Length=562, Percent_Identity=31.1387900355872, Blast_Score=255, Evalue=8e-68,
Organism=Drosophila melanogaster, GI21355121, Length=517, Percent_Identity=30.5609284332689, Blast_Score=242, Evalue=6e-64,
Organism=Drosophila melanogaster, GI24652279, Length=259, Percent_Identity=42.8571428571429, Blast_Score=224, Evalue=1e-58,
Organism=Drosophila melanogaster, GI281363136, Length=535, Percent_Identity=31.7757009345794, Blast_Score=223, Evalue=5e-58,
Organism=Drosophila melanogaster, GI78707192, Length=535, Percent_Identity=31.7757009345794, Blast_Score=223, Evalue=5e-58,
Organism=Drosophila melanogaster, GI24640100, Length=302, Percent_Identity=41.3907284768212, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI24649446, Length=289, Percent_Identity=41.522491349481, Blast_Score=211, Evalue=1e-54,
Organism=Drosophila melanogaster, GI18860063, Length=251, Percent_Identity=44.6215139442231, Blast_Score=211, Evalue=1e-54,
Organism=Drosophila melanogaster, GI19920408, Length=305, Percent_Identity=38.6885245901639, Blast_Score=209, Evalue=5e-54,
Organism=Drosophila melanogaster, GI17738151, Length=253, Percent_Identity=42.6877470355731, Blast_Score=207, Evalue=2e-53,
Organism=Drosophila melanogaster, GI24663015, Length=261, Percent_Identity=43.2950191570881, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI24651451, Length=252, Percent_Identity=43.2539682539683, Blast_Score=203, Evalue=3e-52,
Organism=Drosophila melanogaster, GI281361487, Length=227, Percent_Identity=44.4933920704846, Blast_Score=203, Evalue=4e-52,
Organism=Drosophila melanogaster, GI24658770, Length=262, Percent_Identity=40.8396946564886, Blast_Score=189, Evalue=6e-48,
Organism=Drosophila melanogaster, GI17864540, Length=453, Percent_Identity=32.6710816777042, Blast_Score=186, Evalue=5e-47,
Organism=Drosophila melanogaster, GI17137738, Length=265, Percent_Identity=40, Blast_Score=184, Evalue=2e-46,
Organism=Drosophila melanogaster, GI28573010, Length=397, Percent_Identity=35.264483627204, Blast_Score=182, Evalue=5e-46,
Organism=Drosophila melanogaster, GI24665814, Length=251, Percent_Identity=39.4422310756972, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI28574878, Length=251, Percent_Identity=39.4422310756972, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI18859657, Length=236, Percent_Identity=39.4067796610169, Blast_Score=174, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24581396, Length=261, Percent_Identity=34.8659003831418, Blast_Score=166, Evalue=5e-41,
Organism=Drosophila melanogaster, GI24639391, Length=236, Percent_Identity=38.135593220339, Blast_Score=166, Evalue=5e-41,
Organism=Drosophila melanogaster, GI24644145, Length=278, Percent_Identity=39.2086330935252, Blast_Score=165, Evalue=1e-40,
Organism=Drosophila melanogaster, GI28571849, Length=273, Percent_Identity=35.8974358974359, Blast_Score=161, Evalue=2e-39,
Organism=Drosophila melanogaster, GI28571847, Length=273, Percent_Identity=35.8974358974359, Blast_Score=161, Evalue=2e-39,
Organism=Drosophila melanogaster, GI281360144, Length=232, Percent_Identity=40.0862068965517, Blast_Score=155, Evalue=7e-38,
Organism=Drosophila melanogaster, GI281360140, Length=232, Percent_Identity=40.0862068965517, Blast_Score=155, Evalue=7e-38,
Organism=Drosophila melanogaster, GI281360136, Length=232, Percent_Identity=40.0862068965517, Blast_Score=155, Evalue=7e-38,
Organism=Drosophila melanogaster, GI24644411, Length=232, Percent_Identity=40.0862068965517, Blast_Score=155, Evalue=7e-38,
Organism=Drosophila melanogaster, GI281360146, Length=232, Percent_Identity=40.0862068965517, Blast_Score=155, Evalue=9e-38,
Organism=Drosophila melanogaster, GI281360138, Length=232, Percent_Identity=40.0862068965517, Blast_Score=155, Evalue=9e-38,
Organism=Drosophila melanogaster, GI281360142, Length=232, Percent_Identity=40.0862068965517, Blast_Score=155, Evalue=1e-37,
Organism=Drosophila melanogaster, GI21357333, Length=232, Percent_Identity=40.0862068965517, Blast_Score=155, Evalue=1e-37,
Organism=Drosophila melanogaster, GI20129423, Length=221, Percent_Identity=39.3665158371041, Blast_Score=150, Evalue=3e-36,
Organism=Drosophila melanogaster, GI20129529, Length=223, Percent_Identity=40.3587443946188, Blast_Score=144, Evalue=2e-34,
Organism=Drosophila melanogaster, GI45554047, Length=165, Percent_Identity=40.6060606060606, Blast_Score=129, Evalue=8e-30,
Organism=Drosophila melanogaster, GI24639486, Length=232, Percent_Identity=36.6379310344828, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI28573181, Length=148, Percent_Identity=31.7567567567568, Blast_Score=70, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003593
- InterPro:   IPR005938
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR003338
- InterPro:   IPR004201
- InterPro:   IPR015415 [H]

Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 78304; Mature: 78304

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS00674 AAA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISQQFFFVRVYEGRVKQDVALVSSNIMQSYGLLPGDVILLLGNRQIPFYVQESSDNKID
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCCCC
GIVIGENKLKLLGIRSGERVPVRKVSVSSIKEITLAPSEQKNYDLRKLNLELRGRLVTRG
EEEECCCCEEEEEECCCCCCCEEEECHHHHHHEEECCCCCCCCCCEEECHHHCCEEEEEC
ITLESKEGTFAVISYSPQVEVGYISSETRINIAPESIRIAQKNIPYVTLDDVGGLSKQIR
EEEECCCCCEEEEEECCCEEEEEECCCCEEEECCHHHEEHHCCCCEEEECCCCCHHHHHH
ELLEIVELALTKVEVARMLGLRPPKGVLLYGPPGTGKTLIAKAIANTIMANFFYISGPEI
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHEEEEECCCC
GSKYYGESEKRLRDIFEQAEKNAPSIIFVDEIDAIAPNRDTTSSETDRRIVAQLLTLMDG
CCHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
LTSGSGVVVIGATNRPNALDPALRRPGRFDREIEIPVPDKQGRLEILKIHTRRVPLSQEV
CCCCCCEEEEECCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCC
DLEKIAERTHGFVGADLEALVREAVLSAYHRCNGNLECMQVTMSDFDEALKNVEPSALRE
CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHCCCHHHHHH
FRIEIPNTTWEDIVGLEDIKLELKEVVEWPLKDPGLYEEMKAEIPSGILLYGPPGTGKTM
EEEECCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCCCHHH
LARAVAHESGANFIAINGPELMSMWVGETERAIREVFKKARQSSPTIIFFDEIDAIAVAR
HHHHHHHCCCCCEEEECCHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEC
GADPNKVTDRIVSQLLTEMDGISKRREKVVIIAATNRPDIIDPALLRPGRLEKLIYVPPP
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCEEEEECCC
DYQTRIALFSRLINNRPHEEIDIERLAKLTENYTPAEIKGIVNKAVLLAIRRAKLKNEKP
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
ELTMSDFEEALKTVKPIVTQTMLDYYVSFYQRVRRASGYA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MISQQFFFVRVYEGRVKQDVALVSSNIMQSYGLLPGDVILLLGNRQIPFYVQESSDNKID
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCCCC
GIVIGENKLKLLGIRSGERVPVRKVSVSSIKEITLAPSEQKNYDLRKLNLELRGRLVTRG
EEEECCCCEEEEEECCCCCCCEEEECHHHHHHEEECCCCCCCCCCEEECHHHCCEEEEEC
ITLESKEGTFAVISYSPQVEVGYISSETRINIAPESIRIAQKNIPYVTLDDVGGLSKQIR
EEEECCCCCEEEEEECCCEEEEEECCCCEEEECCHHHEEHHCCCCEEEECCCCCHHHHHH
ELLEIVELALTKVEVARMLGLRPPKGVLLYGPPGTGKTLIAKAIANTIMANFFYISGPEI
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHEEEEECCCC
GSKYYGESEKRLRDIFEQAEKNAPSIIFVDEIDAIAPNRDTTSSETDRRIVAQLLTLMDG
CCHHCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
LTSGSGVVVIGATNRPNALDPALRRPGRFDREIEIPVPDKQGRLEILKIHTRRVPLSQEV
CCCCCCEEEEECCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCC
DLEKIAERTHGFVGADLEALVREAVLSAYHRCNGNLECMQVTMSDFDEALKNVEPSALRE
CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHCCCHHHHHH
FRIEIPNTTWEDIVGLEDIKLELKEVVEWPLKDPGLYEEMKAEIPSGILLYGPPGTGKTM
EEEECCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCCCHHH
LARAVAHESGANFIAINGPELMSMWVGETERAIREVFKKARQSSPTIIFFDEIDAIAVAR
HHHHHHHCCCCCEEEECCHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEC
GADPNKVTDRIVSQLLTEMDGISKRREKVVIIAATNRPDIIDPALLRPGRLEKLIYVPPP
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCEEEEECCC
DYQTRIALFSRLINNRPHEEIDIERLAKLTENYTPAEIKGIVNKAVLLAIRRAKLKNEKP
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
ELTMSDFEEALKTVKPIVTQTMLDYYVSFYQRVRRASGYA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]