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The map label for this gene is glcD [H]

Identifier: 15922881

GI number: 15922881

Start: 2556920

End: 2558161

Strand: Direct

Name: glcD [H]

Synonym: ST2547

Alternate gene names: 15922881

Gene position: 2556920-2558161 (Clockwise)

Preceding gene: 15922880

Following gene: 15922882

Centisome position: 94.89

GC content: 33.01

Gene sequence:

>1242_bases
ATGGAGACATTTTTATTGGCTAAAAAAGAGTTTGAAAAAGAATTTGGTTCTAAATTTATTGATACTGAAGAAATTATAGA
TGAGTATTCAAAAGCTCCTTACTTAGTTTCACCTATTCTTTCAAAAATGGGTAAAAGAATTTTGGGTGCTGTAATAGCTG
AAGATGAGAATGACATTGAATACGCTATTAAAGTTTGTAGCAAATATCGTATTCCTTTATTGGCTAGAGGTGCTGGTACT
TCAACAATTGGTCAAGTTTTACCTATTTTTCCCTCAATAGTTGTTGATATTCAGAAATTGAATAAAGTATTGGAACTTGA
TGGAGACTTTTTAAAAATATCTCCTGGCGTTAAAGTTTTGCAAGCACTTAATTACTTAAGAAAAAAAGGAAAGGAGTTAA
GAGTATATCCTAGTAGCTTTTATATATCTACATTAGGAGGTTACATTGCCGGTGGAGATGTAGGAATAGGATCTTATCAA
TTTGGATATCATTTTCATGGTAATGGGATCAGACGCGTAAAAATAGTAGCTCCTAATGGATCTCAAGAACTTACTGGAGA
TATGACTTTAGCCGTTGCTCAAGCTGCCGGGACTACTGGAATTATAACTGAGGCTGAAGTAGCTGTTATTGATTATGAAG
ACTGGAAAGATCAATTAGTACGTTTCAATAACGTCAGTGAAGTAGTTAAGTTCTTAAAAGATTTAGAAAAAGAAAGATCT
AATATAAGAAGAATTACAGTAGAAGACGAAGAAGCTTTGGCTTTGGTCTCTCAAGGTAGAGTTAAACCGGGAAAGTGGAA
TGTTATATTAGCAAGCACTAAAAGTTTCGGAGAAGAAGTAAATATGAGGTTTTTAGACGAATTAGCATTCGCAGCAATTT
ACGTGACTATGAGTAAGTTAACTAGATTTCCAAACTATTTCTACGAGGTAAGATTGCTACCTCTAAATAGTTTTCTGAGT
GTTGTAAGTCAAATAAAGAAAGCTTTAGGTTCAAACGTATTAATTCACGGGGATGTTATGACTTTAAGAGGTGAAACGAT
AATCTATACTGTATTCATGTCAGATAAAAGCAATTTCGAACTAATAGATTCGATAATGATAAAGGAGGGTATACCATTTG
AAATACATTCCCTAGTAGTAAATGATAGAGTTGATGAGGAATATAGACTAGAATTAATGAAAAAACTAAAGAAAATGGTT
GATCCGCATGATATTCTAAATCCAGGGAAGCTGAGAATATGA

Upstream 100 bases:

>100_bases
TAAAAACTTGAAAAGGATATTAAGTTATCAAACAATTAAGTAATGTTTTTTACTTAGTTAAAGGAAATTCTTTAATACGA
ACATTTTAAAAATACTTCTG

Downstream 100 bases:

>100_bases
TTTTAAAAACTCTAATTGACGTAATTGATATCTTAGAATCTAAAAACCCACTAGAGATAATTAGAAAGAGATTAGAAAAT
AAGGTTAAATATGAGGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
METFLLAKKEFEKEFGSKFIDTEEIIDEYSKAPYLVSPILSKMGKRILGAVIAEDENDIEYAIKVCSKYRIPLLARGAGT
STIGQVLPIFPSIVVDIQKLNKVLELDGDFLKISPGVKVLQALNYLRKKGKELRVYPSSFYISTLGGYIAGGDVGIGSYQ
FGYHFHGNGIRRVKIVAPNGSQELTGDMTLAVAQAAGTTGIITEAEVAVIDYEDWKDQLVRFNNVSEVVKFLKDLEKERS
NIRRITVEDEEALALVSQGRVKPGKWNVILASTKSFGEEVNMRFLDELAFAAIYVTMSKLTRFPNYFYEVRLLPLNSFLS
VVSQIKKALGSNVLIHGDVMTLRGETIIYTVFMSDKSNFELIDSIMIKEGIPFEIHSLVVNDRVDEEYRLELMKKLKKMV
DPHDILNPGKLRI

Sequences:

>Translated_413_residues
METFLLAKKEFEKEFGSKFIDTEEIIDEYSKAPYLVSPILSKMGKRILGAVIAEDENDIEYAIKVCSKYRIPLLARGAGT
STIGQVLPIFPSIVVDIQKLNKVLELDGDFLKISPGVKVLQALNYLRKKGKELRVYPSSFYISTLGGYIAGGDVGIGSYQ
FGYHFHGNGIRRVKIVAPNGSQELTGDMTLAVAQAAGTTGIITEAEVAVIDYEDWKDQLVRFNNVSEVVKFLKDLEKERS
NIRRITVEDEEALALVSQGRVKPGKWNVILASTKSFGEEVNMRFLDELAFAAIYVTMSKLTRFPNYFYEVRLLPLNSFLS
VVSQIKKALGSNVLIHGDVMTLRGETIIYTVFMSDKSNFELIDSIMIKEGIPFEIHSLVVNDRVDEEYRLELMKKLKKMV
DPHDILNPGKLRI
>Mature_413_residues
METFLLAKKEFEKEFGSKFIDTEEIIDEYSKAPYLVSPILSKMGKRILGAVIAEDENDIEYAIKVCSKYRIPLLARGAGT
STIGQVLPIFPSIVVDIQKLNKVLELDGDFLKISPGVKVLQALNYLRKKGKELRVYPSSFYISTLGGYIAGGDVGIGSYQ
FGYHFHGNGIRRVKIVAPNGSQELTGDMTLAVAQAAGTTGIITEAEVAVIDYEDWKDQLVRFNNVSEVVKFLKDLEKERS
NIRRITVEDEEALALVSQGRVKPGKWNVILASTKSFGEEVNMRFLDELAFAAIYVTMSKLTRFPNYFYEVRLLPLNSFLS
VVSQIKKALGSNVLIHGDVMTLRGETIIYTVFMSDKSNFELIDSIMIKEGIPFEIHSLVVNDRVDEEYRLELMKKLKKMV
DPHDILNPGKLRI

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 46428; Mature: 46428

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METFLLAKKEFEKEFGSKFIDTEEIIDEYSKAPYLVSPILSKMGKRILGAVIAEDENDIE
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
YAIKVCSKYRIPLLARGAGTSTIGQVLPIFPSIVVDIQKLNKVLELDGDFLKISPGVKVL
HHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHH
QALNYLRKKGKELRVYPSSFYISTLGGYIAGGDVGIGSYQFGYHFHGNGIRRVKIVAPNG
HHHHHHHHCCCEEEEECCCEEHHHHCCEEECCCCCCCCEEEEEEECCCCEEEEEEECCCC
SQELTGDMTLAVAQAAGTTGIITEAEVAVIDYEDWKDQLVRFNNVSEVVKFLKDLEKERS
CCCCCCCCEEEEEHHCCCCCCEEECEEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHC
NIRRITVEDEEALALVSQGRVKPGKWNVILASTKSFGEEVNMRFLDELAFAAIYVTMSKL
CCEEEEECCHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRFPNYFYEVRLLPLNSFLSVVSQIKKALGSNVLIHGDVMTLRGETIIYTVFMSDKSNFE
HHCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCEEEECCEEEEECCEEEEEEEECCCCCHH
LIDSIMIKEGIPFEIHSLVVNDRVDEEYRLELMKKLKKMVDPHDILNPGKLRI
HHHHHHHHCCCCCEEEHEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
METFLLAKKEFEKEFGSKFIDTEEIIDEYSKAPYLVSPILSKMGKRILGAVIAEDENDIE
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
YAIKVCSKYRIPLLARGAGTSTIGQVLPIFPSIVVDIQKLNKVLELDGDFLKISPGVKVL
HHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHH
QALNYLRKKGKELRVYPSSFYISTLGGYIAGGDVGIGSYQFGYHFHGNGIRRVKIVAPNG
HHHHHHHHCCCEEEEECCCEEHHHHCCEEECCCCCCCCEEEEEEECCCCEEEEEEECCCC
SQELTGDMTLAVAQAAGTTGIITEAEVAVIDYEDWKDQLVRFNNVSEVVKFLKDLEKERS
CCCCCCCCEEEEEHHCCCCCCEEECEEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHC
NIRRITVEDEEALALVSQGRVKPGKWNVILASTKSFGEEVNMRFLDELAFAAIYVTMSKL
CCEEEEECCHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRFPNYFYEVRLLPLNSFLSVVSQIKKALGSNVLIHGDVMTLRGETIIYTVFMSDKSNFE
HHCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCEEEECCEEEEECCEEEEEEEECCCCCHH
LIDSIMIKEGIPFEIHSLVVNDRVDEEYRLELMKKLKKMVDPHDILNPGKLRI
HHHHHHHHCCCCCEEEHEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]