| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is dppF [C]
Identifier: 15922871
GI number: 15922871
Start: 2545285
End: 2546223
Strand: Direct
Name: dppF [C]
Synonym: ST2537
Alternate gene names: 15922871
Gene position: 2545285-2546223 (Clockwise)
Preceding gene: 15922870
Following gene: 15922872
Centisome position: 94.45
GC content: 31.52
Gene sequence:
>939_bases ATGATAAAGCTAGAAAAAATATCAGTTAAATTTGGTGGTGGATTACTTTCAAGGAAAAGAGCTGTTTACGCACTGAGAGA TATAACTACTGATGAGATAACTTCATCTGCATTAGTCATAGGAGAAAGTGGTGCCGGTAAGACAACATTAGGAAAAGTAA TTTTAGGTCTTATAAAACCCTCTGAAGGAACGTATTATTACAAGGGAGTTAACGTGTGGAAAAATAAGAGAAAGATGCTG AAAATTATTAGGAGAGAAATCCAATATATTGCACAAGACCCCTTTGCATCTTTTAATCCAAACAAGACTGTAGGTGAATC AATAGGTTATGTTGTAAAGAAATACTATGGAAGGAAAAACTATAAAGAAAGGGTGATAGAGTTATTAAAAAGTGTAGGAT TAAGTGAAAGGGAGTTTTATAAGTACCCCCACCAATTATCCGGTGGACAATTACAGAGGGCAAATATTGCTAGGGCTTTA GTTCCTAGTCCTAAGATCTTAGTAGCTGATGAACCTACATCAATGTTAGATGCTTCATTAAGATTAAGCATTGTAAATTT GTTAGCAAATATAATAGAAAAAAATGACTTAAAAGTTATTATGATAACTCATGATTTAGGAATTGCTAAGTATTTTTATC ATAAGGTGAAAAACGTTAAAGGGCTAATTCTTTATAAAGGTAGGCTAGTTGAAGAAGGAGATTTTCTAGATATATTAGAG AAACCATTACATCCTTATACGAAATTTCTAAAAGAGAATATAATTGATATTGCTAGTGTGAACAGAGATAATCAATATAT AGTTAGTGAAGAAAAATTAAACGAGAATGGATGCCCATTTTATCCTTTCTGCTCATTTAGGGTAGATATTTGTAAAAATA ATTTTCCTCCTAGCAAGAGTATTAATAATCGTAAAGTTGCTTGTTACCATTATGCTTAA
Upstream 100 bases:
>100_bases TGTCCTTTTCATACTAGGTGTAGTTATGTGTCTGAAATTTGCAAGATGGAGGAACCGGGGTTGTATACAGCTAATACTAG GTTAGTTAGGTGTTTTCTTT
Downstream 100 bases:
>100_bases AAATCAGTTTTAATAAGTTTTCACATGTGAAGCTTCTTTATATTAGTCTGTTTTTAATAGTCCTTGGTATATTACTAGTC CCAATTACTTATTTCGTTTC
Product: peptide transporter ATP-binding protein
Products: ADP; phosphate; dipeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MIKLEKISVKFGGGLLSRKRAVYALRDITTDEITSSALVIGESGAGKTTLGKVILGLIKPSEGTYYYKGVNVWKNKRKML KIIRREIQYIAQDPFASFNPNKTVGESIGYVVKKYYGRKNYKERVIELLKSVGLSEREFYKYPHQLSGGQLQRANIARAL VPSPKILVADEPTSMLDASLRLSIVNLLANIIEKNDLKVIMITHDLGIAKYFYHKVKNVKGLILYKGRLVEEGDFLDILE KPLHPYTKFLKENIIDIASVNRDNQYIVSEEKLNENGCPFYPFCSFRVDICKNNFPPSKSINNRKVACYHYA
Sequences:
>Translated_312_residues MIKLEKISVKFGGGLLSRKRAVYALRDITTDEITSSALVIGESGAGKTTLGKVILGLIKPSEGTYYYKGVNVWKNKRKML KIIRREIQYIAQDPFASFNPNKTVGESIGYVVKKYYGRKNYKERVIELLKSVGLSEREFYKYPHQLSGGQLQRANIARAL VPSPKILVADEPTSMLDASLRLSIVNLLANIIEKNDLKVIMITHDLGIAKYFYHKVKNVKGLILYKGRLVEEGDFLDILE KPLHPYTKFLKENIIDIASVNRDNQYIVSEEKLNENGCPFYPFCSFRVDICKNNFPPSKSINNRKVACYHYA >Mature_312_residues MIKLEKISVKFGGGLLSRKRAVYALRDITTDEITSSALVIGESGAGKTTLGKVILGLIKPSEGTYYYKGVNVWKNKRKML KIIRREIQYIAQDPFASFNPNKTVGESIGYVVKKYYGRKNYKERVIELLKSVGLSEREFYKYPHQLSGGQLQRANIARAL VPSPKILVADEPTSMLDASLRLSIVNLLANIIEKNDLKVIMITHDLGIAKYFYHKVKNVKGLILYKGRLVEEGDFLDILE KPLHPYTKFLKENIIDIASVNRDNQYIVSEEKLNENGCPFYPFCSFRVDICKNNFPPSKSINNRKVACYHYA
Specific function: Probably part of a binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for energy coupling to the transport system [H]
COG id: COG4608
COG function: function code E; ABC-type oligopeptide transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI116734710, Length=208, Percent_Identity=31.25, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI171184400, Length=245, Percent_Identity=27.7551020408163, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI42741659, Length=152, Percent_Identity=34.8684210526316, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI9665248, Length=219, Percent_Identity=26.4840182648402, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI21536376, Length=206, Percent_Identity=28.6407766990291, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI42490749, Length=223, Percent_Identity=26.0089686098655, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI9961250, Length=214, Percent_Identity=30.3738317757009, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI4505771, Length=214, Percent_Identity=30.3738317757009, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI9961252, Length=214, Percent_Identity=30.3738317757009, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1789962, Length=303, Percent_Identity=32.3432343234323, Blast_Score=174, Evalue=8e-45, Organism=Escherichia coli, GI1787500, Length=279, Percent_Identity=34.7670250896057, Blast_Score=173, Evalue=1e-44, Organism=Escherichia coli, GI145693107, Length=263, Percent_Identity=36.1216730038023, Blast_Score=162, Evalue=2e-41, Organism=Escherichia coli, GI1789963, Length=328, Percent_Identity=30.1829268292683, Blast_Score=156, Evalue=2e-39, Organism=Escherichia coli, GI1787758, Length=278, Percent_Identity=30.5755395683453, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI48994883, Length=283, Percent_Identity=31.8021201413428, Blast_Score=142, Evalue=4e-35, Organism=Escherichia coli, GI1788506, Length=215, Percent_Identity=35.3488372093023, Blast_Score=133, Evalue=2e-32, Organism=Escherichia coli, GI1789891, Length=195, Percent_Identity=35.8974358974359, Blast_Score=127, Evalue=7e-31, Organism=Escherichia coli, GI1787547, Length=242, Percent_Identity=30.9917355371901, Blast_Score=127, Evalue=8e-31, Organism=Escherichia coli, GI48994997, Length=222, Percent_Identity=30.1801801801802, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1787759, Length=307, Percent_Identity=26.7100977198697, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1786398, Length=264, Percent_Identity=32.9545454545455, Blast_Score=112, Evalue=4e-26, Organism=Escherichia coli, GI1787548, Length=236, Percent_Identity=27.5423728813559, Blast_Score=108, Evalue=6e-25, Organism=Escherichia coli, GI1788225, Length=226, Percent_Identity=31.858407079646, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI87081709, Length=205, Percent_Identity=35.609756097561, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1789873, Length=206, Percent_Identity=32.5242718446602, Blast_Score=101, Evalue=6e-23, Organism=Escherichia coli, GI1787029, Length=207, Percent_Identity=33.8164251207729, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1788644, Length=220, Percent_Identity=31.8181818181818, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1788450, Length=252, Percent_Identity=27.7777777777778, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI87081834, Length=198, Percent_Identity=33.8383838383838, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI87081791, Length=225, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1789032, Length=224, Percent_Identity=29.4642857142857, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1789890, Length=218, Percent_Identity=27.9816513761468, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1787089, Length=225, Percent_Identity=32.8888888888889, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1786872, Length=194, Percent_Identity=31.4432989690722, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1788761, Length=267, Percent_Identity=31.0861423220974, Blast_Score=88, Evalue=8e-19, Organism=Escherichia coli, GI1787105, Length=188, Percent_Identity=35.1063829787234, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1789672, Length=260, Percent_Identity=25, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1787164, Length=178, Percent_Identity=30.8988764044944, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1788165, Length=208, Percent_Identity=30.2884615384615, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787370, Length=205, Percent_Identity=30.7317073170732, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1786563, Length=184, Percent_Identity=33.1521739130435, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI1787712, Length=209, Percent_Identity=30.1435406698565, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI87082267, Length=211, Percent_Identity=29.3838862559242, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1786253, Length=191, Percent_Identity=27.2251308900524, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1786698, Length=171, Percent_Identity=29.8245614035088, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1786703, Length=201, Percent_Identity=31.8407960199005, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790162, Length=233, Percent_Identity=26.6094420600858, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788053, Length=172, Percent_Identity=30.2325581395349, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786803, Length=195, Percent_Identity=28.7179487179487, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790467, Length=205, Percent_Identity=28.780487804878, Blast_Score=68, Evalue=9e-13, Organism=Escherichia coli, GI1786319, Length=246, Percent_Identity=29.6747967479675, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786654, Length=214, Percent_Identity=27.5700934579439, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1786345, Length=209, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1790534, Length=154, Percent_Identity=29.2207792207792, Blast_Score=64, Evalue=9e-12, Organism=Caenorhabditis elegans, GI115534520, Length=250, Percent_Identity=28, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI193208177, Length=243, Percent_Identity=27.5720164609054, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193209708, Length=206, Percent_Identity=28.6407766990291, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193211015, Length=214, Percent_Identity=28.9719626168224, Blast_Score=64, Evalue=8e-11, Organism=Caenorhabditis elegans, GI71996809, Length=214, Percent_Identity=28.9719626168224, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6324985, Length=251, Percent_Identity=28.2868525896414, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6320296, Length=188, Percent_Identity=28.1914893617021, Blast_Score=63, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6323217, Length=230, Percent_Identity=26.5217391304348, Blast_Score=62, Evalue=8e-11, Organism=Drosophila melanogaster, GI23397593, Length=216, Percent_Identity=28.7037037037037, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI28574744, Length=154, Percent_Identity=33.1168831168831, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI161076682, Length=203, Percent_Identity=30.5418719211823, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI161076684, Length=203, Percent_Identity=30.5418719211823, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24581617, Length=203, Percent_Identity=30.5418719211823, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24581615, Length=203, Percent_Identity=30.5418719211823, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24661270, Length=188, Percent_Identity=27.6595744680851, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI21355589, Length=188, Percent_Identity=27.6595744680851, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI85816269, Length=155, Percent_Identity=32.9032258064516, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24580553, Length=155, Percent_Identity=32.9032258064516, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI85724864, Length=155, Percent_Identity=32.9032258064516, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI24580555, Length=155, Percent_Identity=32.9032258064516, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI85726357, Length=221, Percent_Identity=26.6968325791855, Blast_Score=64, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR010066 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 35496; Mature: 35496
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLEKISVKFGGGLLSRKRAVYALRDITTDEITSSALVIGESGAGKTTLGKVILGLIKP CEEEEEEEEEECCCHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCCHHHHHHHHHHHCCC SEGTYYYKGVNVWKNKRKMLKIIRREIQYIAQDPFASFNPNKTVGESIGYVVKKYYGRKN CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC YKERVIELLKSVGLSEREFYKYPHQLSGGQLQRANIARALVPSPKILVADEPTSMLDASL HHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEHHHHHHHHCCCCCEEEECCCHHHHHHHH RLSIVNLLANIIEKNDLKVIMITHDLGIAKYFYHKVKNVKGLILYKGRLVEEGDFLDILE HHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECEEECCCCHHHHHH KPLHPYTKFLKENIIDIASVNRDNQYIVSEEKLNENGCPFYPFCSFRVDICKNNFPPSKS HCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCCCCCCHHEEEEECCCCCCCCCC INNRKVACYHYA CCCCEEEEEECC >Mature Secondary Structure MIKLEKISVKFGGGLLSRKRAVYALRDITTDEITSSALVIGESGAGKTTLGKVILGLIKP CEEEEEEEEEECCCHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCCHHHHHHHHHHHCCC SEGTYYYKGVNVWKNKRKMLKIIRREIQYIAQDPFASFNPNKTVGESIGYVVKKYYGRKN CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC YKERVIELLKSVGLSEREFYKYPHQLSGGQLQRANIARALVPSPKILVADEPTSMLDASL HHHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEHHHHHHHHCCCCCEEEECCCHHHHHHHH RLSIVNLLANIIEKNDLKVIMITHDLGIAKYFYHKVKNVKGLILYKGRLVEEGDFLDILE HHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECEEECCCCHHHHHH KPLHPYTKFLKENIIDIASVNRDNQYIVSEEKLNENGCPFYPFCSFRVDICKNNFPPSKS HCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCCCCCCHHEEEEECCCCCCCCCC INNRKVACYHYA CCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; dipeptides [Periplasm]; H2O [C]
Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8796346; 9163424 [H]