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The map label for this gene is yggR [C]

Identifier: 15922858

GI number: 15922858

Start: 2528291

End: 2529832

Strand: Direct

Name: yggR [C]

Synonym: ST2523

Alternate gene names: 15922858

Gene position: 2528291-2529832 (Clockwise)

Preceding gene: 15922857

Following gene: 15922859

Centisome position: 93.82

GC content: 30.87

Gene sequence:

>1542_bases
ATGAGCTTTGTTAATGATTATATAGGGAATTTAAAGGAAAAACCTATTTTAGTTGATAATCCCAATTCTCTAAAAGGATC
TAAGAGTTATAATGCAATATATAAAGTAGACGATAACATCTATATACATGTTCAAAGTTTACAATCTGAAGATGGATATA
ATCAATATACTGTAATTGAACCACCAAGGCCTAAACCAGAAGAGATGGAGGAAATTGAGGAAAGATTTGCTAAAGTGATA
GGAGATAAAGATCCTCCAATAACTATTGAAGAGAAAGAAAAATTTATTATACAAAAATTAGAAAAAATATTAAGTAAGAT
GAAATTATCAGTAGCTAAAGAATATGTTATTTATCATTTTATACGAGATAAATTATATTTAGGAATAATCGAACCACTAA
TTAGAGATCCCTATATTGAAGATATATCCCTACCAGGGTTAGGTCATATATACATAGTGCATAAAGTTTTTGGTCCAATG
AGAACATCAATAAAAATAGAAAAAGAAGAAGAATTAGATGATTTGATTATATCCCTAAGTGAGAAGACATATAGACCGGT
ATCTCATAATAGGCCTATTGTTGACGCAAGTTTACCGGATGGTTCTAGAGTAAATTTTGTTTATGGAATAGATGTAAGTA
GAAGAGGTTCGAATTTAACTATTAGAAAATTCAGTAAAGTTCCAATAAGTATAACCCAGTTAATATCTTTCGGTACTATG
TCTCCACTATTAGCTGGTTATATTTGGATGATGTTAGATGAAGGTATGAATTTATTTGTATGCGGTGAAACTGCTTCTGG
TAAAACTACGACCTTAAATGCAATTACTGCATTTATTCCGCCAAATTTAAAAATAATTACGATTGAAGATACGCCGGAGT
TAACTGTTCCTCATTCTAACTGGGTTGCGGAAGTGACTAGGGAAACTGGAGGAGAAGGTACAATAAAACTATTTGACTTG
CTAAAAGCTGCTTTAAGGCAAAGACCAAACTATATTCTCGTTGGCGAGATAAGAGATAAAGAAGGAAACGTGGCTTTTCA
AGCTATGCAAACTGGTCATTCGGTAATGGCAACATTCCACGCTGCAAACATAACAACTTTAATACAAAGACTTACAGGAT
ATCCGATAGAAGTGCCAAAAACTTATATTAATAATCTTAATATAGCTTTATTTCAGACAGCATTATATGATAAAAAAGGG
AATCTGATTAGAAGAGTTATTGAAGTTGATGAGATAATTGACGTAGATCCTGCTACCAATGATGTAATTTACATACCTTC
ATTCACTTATGATGCAACAGAAGATAAAATAATTTTTGCAGGAAGAGGTTCATCATATTTAATAGAAAATAAAATAGCAA
TAAGAAGGGGAGTTAGTAGGAAAAATATTGGAATTCTCTATGATGAATTAAACTTAAGGGCTGAATTTCTTAGAATTTTA
GTTGAAAAAAAGATATTTAATTATTTTGATGTATGGGAATATATTCTTAGAGCGAGACAATTAGGCCTAGAGGAGGCAGT
TAGATATGTTAAAAATATTTAA

Upstream 100 bases:

>100_bases
AGACGGTAGGTGGTATTCAAGGTTCCGATACAATATCTTTTGATATAGATCCGGCCTTAGGAATTAAAGTAATTCCGTTA
TCCTTATCGAGGGCGTAGCT

Downstream 100 bases:

>100_bases
CAAGAGAGATGAAGTAGATTCAAAATACATATTTATGATAGCTTATATGTTAGCATTGTTTTCATCGGGAGTTCCACCAG
AAATAGTTATTCTTCATCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 512

Protein sequence:

>513_residues
MSFVNDYIGNLKEKPILVDNPNSLKGSKSYNAIYKVDDNIYIHVQSLQSEDGYNQYTVIEPPRPKPEEMEEIEERFAKVI
GDKDPPITIEEKEKFIIQKLEKILSKMKLSVAKEYVIYHFIRDKLYLGIIEPLIRDPYIEDISLPGLGHIYIVHKVFGPM
RTSIKIEKEEELDDLIISLSEKTYRPVSHNRPIVDASLPDGSRVNFVYGIDVSRRGSNLTIRKFSKVPISITQLISFGTM
SPLLAGYIWMMLDEGMNLFVCGETASGKTTTLNAITAFIPPNLKIITIEDTPELTVPHSNWVAEVTRETGGEGTIKLFDL
LKAALRQRPNYILVGEIRDKEGNVAFQAMQTGHSVMATFHAANITTLIQRLTGYPIEVPKTYINNLNIALFQTALYDKKG
NLIRRVIEVDEIIDVDPATNDVIYIPSFTYDATEDKIIFAGRGSSYLIENKIAIRRGVSRKNIGILYDELNLRAEFLRIL
VEKKIFNYFDVWEYILRARQLGLEEAVRYVKNI

Sequences:

>Translated_513_residues
MSFVNDYIGNLKEKPILVDNPNSLKGSKSYNAIYKVDDNIYIHVQSLQSEDGYNQYTVIEPPRPKPEEMEEIEERFAKVI
GDKDPPITIEEKEKFIIQKLEKILSKMKLSVAKEYVIYHFIRDKLYLGIIEPLIRDPYIEDISLPGLGHIYIVHKVFGPM
RTSIKIEKEEELDDLIISLSEKTYRPVSHNRPIVDASLPDGSRVNFVYGIDVSRRGSNLTIRKFSKVPISITQLISFGTM
SPLLAGYIWMMLDEGMNLFVCGETASGKTTTLNAITAFIPPNLKIITIEDTPELTVPHSNWVAEVTRETGGEGTIKLFDL
LKAALRQRPNYILVGEIRDKEGNVAFQAMQTGHSVMATFHAANITTLIQRLTGYPIEVPKTYINNLNIALFQTALYDKKG
NLIRRVIEVDEIIDVDPATNDVIYIPSFTYDATEDKIIFAGRGSSYLIENKIAIRRGVSRKNIGILYDELNLRAEFLRIL
VEKKIFNYFDVWEYILRARQLGLEEAVRYVKNI
>Mature_512_residues
SFVNDYIGNLKEKPILVDNPNSLKGSKSYNAIYKVDDNIYIHVQSLQSEDGYNQYTVIEPPRPKPEEMEEIEERFAKVIG
DKDPPITIEEKEKFIIQKLEKILSKMKLSVAKEYVIYHFIRDKLYLGIIEPLIRDPYIEDISLPGLGHIYIVHKVFGPMR
TSIKIEKEEELDDLIISLSEKTYRPVSHNRPIVDASLPDGSRVNFVYGIDVSRRGSNLTIRKFSKVPISITQLISFGTMS
PLLAGYIWMMLDEGMNLFVCGETASGKTTTLNAITAFIPPNLKIITIEDTPELTVPHSNWVAEVTRETGGEGTIKLFDLL
KAALRQRPNYILVGEIRDKEGNVAFQAMQTGHSVMATFHAANITTLIQRLTGYPIEVPKTYINNLNIALFQTALYDKKGN
LIRRVIEVDEIIDVDPATNDVIYIPSFTYDATEDKIIFAGRGSSYLIENKIAIRRGVSRKNIGILYDELNLRAEFLRILV
EKKIFNYFDVWEYILRARQLGLEEAVRYVKNI

Specific function: Unknown

COG id: COG0630

COG function: function code NU; Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI87082188, Length=252, Percent_Identity=26.5873015873016, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786296, Length=192, Percent_Identity=31.25, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1789723, Length=122, Percent_Identity=36.8852459016393, Blast_Score=66, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 58521; Mature: 58390

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFVNDYIGNLKEKPILVDNPNSLKGSKSYNAIYKVDDNIYIHVQSLQSEDGYNQYTVIE
CCCHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCEEEEEC
PPRPKPEEMEEIEERFAKVIGDKDPPITIEEKEKFIIQKLEKILSKMKLSVAKEYVIYHF
CCCCCHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRDKLYLGIIEPLIRDPYIEDISLPGLGHIYIVHKVFGPMRTSIKIEKEEELDDLIISLS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHCCCCCEEEEECHHHHHHHHHHHH
EKTYRPVSHNRPIVDASLPDGSRVNFVYGIDVSRRGSNLTIRKFSKVPISITQLISFGTM
HHHCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCEEHHHHHHHCCH
SPLLAGYIWMMLDEGMNLFVCGETASGKTTTLNAITAFIPPNLKIITIEDTPELTVPHSN
HHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEEEECCCCEEEEEECCCCCEECCCCC
WVAEVTRETGGEGTIKLFDLLKAALRQRPNYILVGEIRDKEGNVAFQAMQTGHSVMATFH
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEHHCCCCEEEEHH
AANITTLIQRLTGYPIEVPKTYINNLNIALFQTALYDKKGNLIRRVIEVDEIIDVDPATN
HHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHEECCCCCC
DVIYIPSFTYDATEDKIIFAGRGSSYLIENKIAIRRGVSRKNIGILYDELNLRAEFLRIL
CEEEECCCCCCCCCCEEEEEECCCCEEEECCHHHHCCCCCCCCEEEEECHHHHHHHHHHH
VEKKIFNYFDVWEYILRARQLGLEEAVRYVKNI
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure 
SFVNDYIGNLKEKPILVDNPNSLKGSKSYNAIYKVDDNIYIHVQSLQSEDGYNQYTVIE
CCHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCEEEEEC
PPRPKPEEMEEIEERFAKVIGDKDPPITIEEKEKFIIQKLEKILSKMKLSVAKEYVIYHF
CCCCCHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRDKLYLGIIEPLIRDPYIEDISLPGLGHIYIVHKVFGPMRTSIKIEKEEELDDLIISLS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHCCCCCEEEEECHHHHHHHHHHHH
EKTYRPVSHNRPIVDASLPDGSRVNFVYGIDVSRRGSNLTIRKFSKVPISITQLISFGTM
HHHCCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCEEHHHHHHHCCH
SPLLAGYIWMMLDEGMNLFVCGETASGKTTTLNAITAFIPPNLKIITIEDTPELTVPHSN
HHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEEEECCCCEEEEEECCCCCEECCCCC
WVAEVTRETGGEGTIKLFDLLKAALRQRPNYILVGEIRDKEGNVAFQAMQTGHSVMATFH
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEHHCCCCEEEEHH
AANITTLIQRLTGYPIEVPKTYINNLNIALFQTALYDKKGNLIRRVIEVDEIIDVDPATN
HHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHEECCCCCC
DVIYIPSFTYDATEDKIIFAGRGSSYLIENKIAIRRGVSRKNIGILYDELNLRAEFLRIL
CEEEECCCCCCCCCCEEEEEECCCCEEEECCHHHHCCCCCCCCEEEEECHHHHHHHHHHH
VEKKIFNYFDVWEYILRARQLGLEEAVRYVKNI
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]