| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is coxL [H]
Identifier: 15922814
GI number: 15922814
Start: 2485140
End: 2487332
Strand: Direct
Name: coxL [H]
Synonym: ST2484
Alternate gene names: 15922814
Gene position: 2485140-2487332 (Clockwise)
Preceding gene: 15922812
Following gene: 15922815
Centisome position: 92.22
GC content: 36.3
Gene sequence:
>2193_bases GTGTACGTGGGTCAACGCGTTAAAAGGAAGGAAGACCTTAAATTAATAACTGGATCTGGTAGATATATTGATGATATAGA AATTCCTGGAAATCTTTATATAGCAATTTTAAGAAGTAGTGTTGCCCATGCAAAATTAAAGAAAATAGAGTATAGTGACG TATTAAAATTGAACGGTGTTTATGGAGTAATAACCGGTTTAACAATTCCAGTTGAGAATAGACCAAGAAACTTTCCAATG GCAAAAGACGAAATCTTGTATATGGGACAACCTATAGCTGCCGTTCTGGCTAAAGATAGGTACGTTGCGGTTGATGCTCT CGATTATATTTCATATGATTATGAAGAATTGCCAGCCGTTATAGACCCAGAAGAAGCTATAAATAGTAAGGTAAAAGCTA TAGAGGATTACGATAATATAATTTATAAGAAGACTTATTCTGGTGGAAATGCCGAAGAAGCTTATGAAAAATCTGACGTA AAAATTGAGGAGAAATTAGTAATTTCAAGGGTTTACGCCGCACCGATGGAACCTAGAGGGTTAGTAGTAGATTATCAACA AGATAGATTAACAGTATATGCCTCTACACAATCTCCACACTATATGAGATCTTTCTTGCTTTCAGCATTCGGAGATAAGG TAAATGATATTAGAGTGATTCAAGCAGATGTTGGAGGTGCTTTTGGTTCAAAACTATTCCCATATCCAGAAGATTATATA GCTGTATTCGCCGCGTTAACTTATAAAAGACCAGTTAAGCTAGTAAATACTAGAAGAGATGACTTATTTTCAACTTATCA TTCGAGAGGTCAAATTCACAAGGTTAAGGTTGGTGCTTCTAAGGATGGTAAAATAAATTCCATATTAGATGATTTAATCA TTGACCTTGGTGCTGCTTGGCATGGTACATACTTAGCTGATATTCCAGCAACTCTAATTACCGGTCCTTATGACATTAAG AATGCTAAAGTTAATGTATTTGGTGTTTTAACAAACAAAACCCCTCTTGACCAATACAGAGGTGCTGGAAGACCTGAAGC AGCATTTGTTTATGAGAGGATAATGGATATTGTTGCTGATGAACTAAAGATTGATCCAATTGAATTGAGGAGAAAGAATA TAATTCAATCGACACCTTACAAGAACGTCATGGGTTTAACATACGATAGCGGCGATTATAATGCTTTACTTACTAAGGCT GAAAGTTACTATAGGGAAATGGAGCAAAGAGCGGAAGAATTAAGAAGACAAGGAAAGAGAGTTGGTGTTGGTCTTTCATT TTATATTGAGCAAAATAACTTCGGCCCTTGGGAAAGTGCATCAGTTAGACTTCTTTCCAATGGGAAAGTTGAGGTTGTGA TAGGTGCTGCACCTCATGGTCAAGGCACAGCGACTGGAATAGCTCAAATAGTTGCTGATGAATTAGAAATTAGTATTGAC GATGTTGAAGTCACATGGGGTGACACCGATAAGATATCCAATGCGTTTGGAACTTATGGTAGTAGAAGCCTAACATTAGC TGGAAATGCTGCACTTCTTGCAAGTAGAAAATTAAAAGAAAATATAATGAAGTTAGCTGCACAATTCATGAAGAGTGATG TTGAAGAACTGCAATATAAAGATGGTAAAGTATTTAATCCTAAGACTGGTAAATCAATGACACTGAAAGAAATAGCTATA AAAGTTACAAGCAATCTAGGTGGAGTTTGGAGGTATAAAGCAGAACCTACATTAGAGGCTACGGCATCTTTTGGGTTTGA TAATTATACCTTCCCCTATGGTTCACATATAGCTATGGTTGAAGTTACTGATGAAGGAGTAGTTAAAGTTCTAGATTATG TTGCTATAGATGATATTGGTGTCGTTGTTAATCCAATGTTAGCTGAAGGTCAAGTACACGGTGGAGTAATTCAAGGATTT GGAGAAACCTTGCTAGAGCAAATTGTTTATGATAATAACGGTAATTTATTAACATCGACGTTTGCAGATTATCTAATTCC CTCAGCCGTTGAATCGTTTAACATGAAATGGTTCTACACAGAAATTGGTAAATCTAACGCGCCATTACCAGCAAAAGGAA TAGGTGAAGGTGCTACAATTGGTGCACCACCAGCGTTAATTAGAGCTATAGAAAGGGCAATAGGTAAAAGATTAACTGCC TTACCGGTAAAAATGGAAGAATTAAGTAAATAA
Upstream 100 bases:
>100_bases ACTTATCTGTTTAAACGTGTTACGGAATCTTATCCTTTTTCATTTACTTGACTAAGTAAAAAGGCAAAATTTTTATGTAA TGTATGATTTTTCATAAAAT
Downstream 100 bases:
>100_bases TGTCTTTTTACTGGTTAAATAATCTTCTTTGAGAATAACTTAAAAAATTTTATTACATAAATTTAAAAGTAATGAAATCG CACTATTATTTATGCCAAAA
Product: aldehyde oxidoreductase
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 730; Mature: 730
Protein sequence:
>730_residues MYVGQRVKRKEDLKLITGSGRYIDDIEIPGNLYIAILRSSVAHAKLKKIEYSDVLKLNGVYGVITGLTIPVENRPRNFPM AKDEILYMGQPIAAVLAKDRYVAVDALDYISYDYEELPAVIDPEEAINSKVKAIEDYDNIIYKKTYSGGNAEEAYEKSDV KIEEKLVISRVYAAPMEPRGLVVDYQQDRLTVYASTQSPHYMRSFLLSAFGDKVNDIRVIQADVGGAFGSKLFPYPEDYI AVFAALTYKRPVKLVNTRRDDLFSTYHSRGQIHKVKVGASKDGKINSILDDLIIDLGAAWHGTYLADIPATLITGPYDIK NAKVNVFGVLTNKTPLDQYRGAGRPEAAFVYERIMDIVADELKIDPIELRRKNIIQSTPYKNVMGLTYDSGDYNALLTKA ESYYREMEQRAEELRRQGKRVGVGLSFYIEQNNFGPWESASVRLLSNGKVEVVIGAAPHGQGTATGIAQIVADELEISID DVEVTWGDTDKISNAFGTYGSRSLTLAGNAALLASRKLKENIMKLAAQFMKSDVEELQYKDGKVFNPKTGKSMTLKEIAI KVTSNLGGVWRYKAEPTLEATASFGFDNYTFPYGSHIAMVEVTDEGVVKVLDYVAIDDIGVVVNPMLAEGQVHGGVIQGF GETLLEQIVYDNNGNLLTSTFADYLIPSAVESFNMKWFYTEIGKSNAPLPAKGIGEGATIGAPPALIRAIERAIGKRLTA LPVKMEELSK
Sequences:
>Translated_730_residues MYVGQRVKRKEDLKLITGSGRYIDDIEIPGNLYIAILRSSVAHAKLKKIEYSDVLKLNGVYGVITGLTIPVENRPRNFPM AKDEILYMGQPIAAVLAKDRYVAVDALDYISYDYEELPAVIDPEEAINSKVKAIEDYDNIIYKKTYSGGNAEEAYEKSDV KIEEKLVISRVYAAPMEPRGLVVDYQQDRLTVYASTQSPHYMRSFLLSAFGDKVNDIRVIQADVGGAFGSKLFPYPEDYI AVFAALTYKRPVKLVNTRRDDLFSTYHSRGQIHKVKVGASKDGKINSILDDLIIDLGAAWHGTYLADIPATLITGPYDIK NAKVNVFGVLTNKTPLDQYRGAGRPEAAFVYERIMDIVADELKIDPIELRRKNIIQSTPYKNVMGLTYDSGDYNALLTKA ESYYREMEQRAEELRRQGKRVGVGLSFYIEQNNFGPWESASVRLLSNGKVEVVIGAAPHGQGTATGIAQIVADELEISID DVEVTWGDTDKISNAFGTYGSRSLTLAGNAALLASRKLKENIMKLAAQFMKSDVEELQYKDGKVFNPKTGKSMTLKEIAI KVTSNLGGVWRYKAEPTLEATASFGFDNYTFPYGSHIAMVEVTDEGVVKVLDYVAIDDIGVVVNPMLAEGQVHGGVIQGF GETLLEQIVYDNNGNLLTSTFADYLIPSAVESFNMKWFYTEIGKSNAPLPAKGIGEGATIGAPPALIRAIERAIGKRLTA LPVKMEELSK >Mature_730_residues MYVGQRVKRKEDLKLITGSGRYIDDIEIPGNLYIAILRSSVAHAKLKKIEYSDVLKLNGVYGVITGLTIPVENRPRNFPM AKDEILYMGQPIAAVLAKDRYVAVDALDYISYDYEELPAVIDPEEAINSKVKAIEDYDNIIYKKTYSGGNAEEAYEKSDV KIEEKLVISRVYAAPMEPRGLVVDYQQDRLTVYASTQSPHYMRSFLLSAFGDKVNDIRVIQADVGGAFGSKLFPYPEDYI AVFAALTYKRPVKLVNTRRDDLFSTYHSRGQIHKVKVGASKDGKINSILDDLIIDLGAAWHGTYLADIPATLITGPYDIK NAKVNVFGVLTNKTPLDQYRGAGRPEAAFVYERIMDIVADELKIDPIELRRKNIIQSTPYKNVMGLTYDSGDYNALLTKA ESYYREMEQRAEELRRQGKRVGVGLSFYIEQNNFGPWESASVRLLSNGKVEVVIGAAPHGQGTATGIAQIVADELEISID DVEVTWGDTDKISNAFGTYGSRSLTLAGNAALLASRKLKENIMKLAAQFMKSDVEELQYKDGKVFNPKTGKSMTLKEIAI KVTSNLGGVWRYKAEPTLEATASFGFDNYTFPYGSHIAMVEVTDEGVVKVLDYVAIDDIGVVVNPMLAEGQVHGGVIQGF GETLLEQIVYDNNGNLLTSTFADYLIPSAVESFNMKWFYTEIGKSNAPLPAKGIGEGATIGAPPALIRAIERAIGKRLTA LPVKMEELSK
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71773480, Length=731, Percent_Identity=25.5813953488372, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI91823271, Length=707, Percent_Identity=25.1768033946252, Blast_Score=128, Evalue=2e-29, Organism=Escherichia coli, GI1789246, Length=780, Percent_Identity=25.3846153846154, Blast_Score=224, Evalue=1e-59, Organism=Escherichia coli, GI1789230, Length=747, Percent_Identity=26.6398929049531, Blast_Score=224, Evalue=1e-59, Organism=Escherichia coli, GI1786478, Length=730, Percent_Identity=25.8904109589041, Blast_Score=145, Evalue=9e-36, Organism=Caenorhabditis elegans, GI17540638, Length=752, Percent_Identity=24.7340425531915, Blast_Score=151, Evalue=1e-36, Organism=Caenorhabditis elegans, GI32566215, Length=726, Percent_Identity=24.6556473829201, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17539860, Length=748, Percent_Identity=22.9946524064171, Blast_Score=129, Evalue=4e-30, Organism=Drosophila melanogaster, GI17737937, Length=745, Percent_Identity=24.8322147651007, Blast_Score=136, Evalue=5e-32, Organism=Drosophila melanogaster, GI24647199, Length=697, Percent_Identity=23.2424677187948, Blast_Score=108, Evalue=2e-23, Organism=Drosophila melanogaster, GI24647193, Length=706, Percent_Identity=24.3626062322946, Blast_Score=107, Evalue=4e-23, Organism=Drosophila melanogaster, GI24647201, Length=765, Percent_Identity=22.6143790849673, Blast_Score=97, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 80715; Mature: 80715
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVGQRVKRKEDLKLITGSGRYIDDIEIPGNLYIAILRSSVAHAKLKKIEYSDVLKLNGV CCCCCCCCCCCCCEEEECCCCEEEEEECCCCEEEEEHHHHHHHHHHHHCCHHHEEEECCC YGVITGLTIPVENRPRNFPMAKDEILYMGQPIAAVLAKDRYVAVDALDYISYDYEELPAV EEEEECCEEEECCCCCCCCCCCCCEEECCCCHHHHHHCCCEEEEEHHHHHCCCHHHCCCC IDPEEAINSKVKAIEDYDNIIYKKTYSGGNAEEAYEKSDVKIEEKLVISRVYAAPMEPRG CCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC LVVDYQQDRLTVYASTQSPHYMRSFLLSAFGDKVNDIRVIQADVGGAFGSKLFPYPEDYI EEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHH AVFAALTYKRPVKLVNTRRDDLFSTYHSRGQIHKVKVGASKDGKINSILDDLIIDLGAAW HHHHHHHHCCCHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCC HGTYLADIPATLITGPYDIKNAKVNVFGVLTNKTPLDQYRGAGRPEAAFVYERIMDIVAD CCCCHHCCCHHHCCCCCCCCCCEEEEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHH ELKIDPIELRRKNIIQSTPYKNVMGLTYDSGDYNALLTKAESYYREMEQRAEELRRQGKR HHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCE VGVGLSFYIEQNNFGPWESASVRLLSNGKVEVVIGAAPHGQGTATGIAQIVADELEISID ECCEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHEEEEE DVEVTWGDTDKISNAFGTYGSRSLTLAGNAALLASRKLKENIMKLAAQFMKSDVEELQYK EEEEEECCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DGKVFNPKTGKSMTLKEIAIKVTSNLGGVWRYKAEPTLEATASFGFDNYTFPYGSHIAMV CCCEECCCCCCCEEHHHHHEEEECCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCEEEEE EVTDEGVVKVLDYVAIDDIGVVVNPMLAEGQVHGGVIQGFGETLLEQIVYDNNGNLLTST EECCCCHHHHHHHHHHCCCCCEECCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHH FADYLIPSAVESFNMKWFYTEIGKSNAPLPAKGIGEGATIGAPPALIRAIERAIGKRLTA HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEE LPVKMEELSK CCCCHHHHCC >Mature Secondary Structure MYVGQRVKRKEDLKLITGSGRYIDDIEIPGNLYIAILRSSVAHAKLKKIEYSDVLKLNGV CCCCCCCCCCCCCEEEECCCCEEEEEECCCCEEEEEHHHHHHHHHHHHCCHHHEEEECCC YGVITGLTIPVENRPRNFPMAKDEILYMGQPIAAVLAKDRYVAVDALDYISYDYEELPAV EEEEECCEEEECCCCCCCCCCCCCEEECCCCHHHHHHCCCEEEEEHHHHHCCCHHHCCCC IDPEEAINSKVKAIEDYDNIIYKKTYSGGNAEEAYEKSDVKIEEKLVISRVYAAPMEPRG CCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC LVVDYQQDRLTVYASTQSPHYMRSFLLSAFGDKVNDIRVIQADVGGAFGSKLFPYPEDYI EEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHH AVFAALTYKRPVKLVNTRRDDLFSTYHSRGQIHKVKVGASKDGKINSILDDLIIDLGAAW HHHHHHHHCCCHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCC HGTYLADIPATLITGPYDIKNAKVNVFGVLTNKTPLDQYRGAGRPEAAFVYERIMDIVAD CCCCHHCCCHHHCCCCCCCCCCEEEEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHH ELKIDPIELRRKNIIQSTPYKNVMGLTYDSGDYNALLTKAESYYREMEQRAEELRRQGKR HHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCE VGVGLSFYIEQNNFGPWESASVRLLSNGKVEVVIGAAPHGQGTATGIAQIVADELEISID ECCEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHEEEEE DVEVTWGDTDKISNAFGTYGSRSLTLAGNAALLASRKLKENIMKLAAQFMKSDVEELQYK EEEEEECCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DGKVFNPKTGKSMTLKEIAIKVTSNLGGVWRYKAEPTLEATASFGFDNYTFPYGSHIAMV CCCEECCCCCCCEEHHHHHEEEECCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCEEEEE EVTDEGVVKVLDYVAIDDIGVVVNPMLAEGQVHGGVIQGFGETLLEQIVYDNNGNLLTST EECCCCHHHHHHHHHHCCCCCEECCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHH FADYLIPSAVESFNMKWFYTEIGKSNAPLPAKGIGEGATIGAPPALIRAIERAIGKRLTA HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEE LPVKMEELSK CCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7721710; 2818128; 12515558; 10430865; 12475995 [H]