| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is yidH [C]
Identifier: 15922798
GI number: 15922798
Start: 2465267
End: 2465611
Strand: Direct
Name: yidH [C]
Synonym: ST2466
Alternate gene names: 15922798
Gene position: 2465267-2465611 (Clockwise)
Preceding gene: 15922797
Following gene: 15922800
Centisome position: 91.48
GC content: 35.07
Gene sequence:
>345_bases ATGAGTGCGAGTGATCATTTAGCAAACAAGAGGACATTTTTAGCATGGGTCAGAACAGCGATAGCCTTAATGGGTTTTGG TTTCGTAATTGCAAAGTTTCAAATTTTTCTTCACATCTTGGCACATCAACCCTTAACTTCAACAACTCTGTTAGGCGGTG TAATAATGATAATTATGGGAATAGCAACCTTGCTTTACGGTTTTTATGAATATATTCAGCAAGAAAAAGAGCTAGAACGA AAACAGTTCAGTCCTAGATTAACTCCAATGATTATTTACACATCTTTACTTACAGTATTGGCAATAGCTTTAGTAGTTAG CCTATACTTAAGTACTGGGATTTAA
Upstream 100 bases:
>100_bases ATGGATAAAAAATTAGGAGTTAAAGAAAGCATAGTCTTGCTATTTCTTTATTTTCTAATAGCCACTATGACCTTATATCT ATGAACAAAAATGTACTTTT
Downstream 100 bases:
>100_bases TTCTGTGTATCCAAATACTCTAGGAGTTTTTGGTTTTGCATTAACGTTGATTATTATTCCCCTTTCTATTGTCTCTGGAA TTTCTCCGTTTAAAACAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MSASDHLANKRTFLAWVRTAIALMGFGFVIAKFQIFLHILAHQPLTSTTLLGGVIMIIMGIATLLYGFYEYIQQEKELER KQFSPRLTPMIIYTSLLTVLAIALVVSLYLSTGI
Sequences:
>Translated_114_residues MSASDHLANKRTFLAWVRTAIALMGFGFVIAKFQIFLHILAHQPLTSTTLLGGVIMIIMGIATLLYGFYEYIQQEKELER KQFSPRLTPMIIYTSLLTVLAIALVVSLYLSTGI >Mature_113_residues SASDHLANKRTFLAWVRTAIALMGFGFVIAKFQIFLHILAHQPLTSTTLLGGVIMIIMGIATLLYGFYEYIQQEKELERK QFSPRLTPMIIYTSLLTVLAIALVVSLYLSTGI
Specific function: Unknown
COG id: COG2149
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12767; Mature: 12635
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASDHLANKRTFLAWVRTAIALMGFGFVIAKFQIFLHILAHQPLTSTTLLGGVIMIIMG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IATLLYGFYEYIQQEKELERKQFSPRLTPMIIYTSLLTVLAIALVVSLYLSTGI HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SASDHLANKRTFLAWVRTAIALMGFGFVIAKFQIFLHILAHQPLTSTTLLGGVIMIIMG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IATLLYGFYEYIQQEKELERKQFSPRLTPMIIYTSLLTVLAIALVVSLYLSTGI HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA