| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is yaaU [H]
Identifier: 15922761
GI number: 15922761
Start: 2431021
End: 2432397
Strand: Direct
Name: yaaU [H]
Synonym: ST2428
Alternate gene names: 15922761
Gene position: 2431021-2432397 (Clockwise)
Preceding gene: 15922759
Following gene: 15922762
Centisome position: 90.21
GC content: 37.55
Gene sequence:
>1377_bases ATGAAGTTATCAGATATTTTCAAACCCCTGGATCAAAGAAACTTCGATGTATGGCATATAAAGTCACTACTAACTACAGG TATGGGAGTTTTTACTGACGGATATGATCTCTCATCAATCGGCATAGTCTTAGCAATGGTTCTCTCATCATTTGGCATAA CAAGCAAATCACCAGATTACACTCTATGGCAAAGTCTAGTATCGGGATCAGCATTAATAGGTGCAGCAGTGGGAGCAATA ATTTTCGGAATACTCTCTAATAGAGGTAGGAAAACATTTTACGGAATAGACGTTGCCCTTCTTTCTATTGGTGCATTATT ACAAGCGTTTGTTTCAACTCCCTTAGAATTAGTGATAGTTAGAGGACTTTTGGGTTTAGGTGTTGGTGCGGATTATGTAT TATCTCCTATGATAATGGCAGAGTATTCAAACGCTAAAGATAGGGGGAAGTTACTTGCTTTCGGTTTTGGTTTAATGTGG GGATTTGGTGCAACTACTGCAGCGGCAATAGCTCTAGGATTGGAAGCTCTTAGCGTACCCACAAATATTATTTGGAGAGT AGTTTTGGTAACTGGTGCTATACCATCGGCCTCTGTAATTTACTTAAGAAGAAAAATTCCGGAAACACCAAGGTATTTAG CTAGGATTAAGGGTGACGTTGAAAAATTTAGAGAAGTTGTAAGGACATTAGCTAATACTGATATTCATGTAAATAAAGAA TTAAAAGATATTAACAGTTTCTCTTCATATTTCAGTAAATTTTGGAAAACATTCTTGGCAGCATGCTTACTTTGGTTCTT ATTTGATATTGTAGCATACTCTGGTATTCTATTTGGTCCAACTGATATTGCAAAAAGTATTGGAATAAATAATAGTGCTA TCTTTCAGTTCGTTATAGAGTTCGGTTTTACGCTACCTGGTGGGATAATTGCATTGTTAACCTTAGATAGAATTGGAAGA AAACCTATGCAGACATTTGGTTTCTTCGGAATGGCTATCTCTTTACTTCTCTTCTCTTTATTAAAATCGAGTATACCGGC TACCACAGCACTAATACTATATGGTTTACAGAATTTGTTTTCACAAGCAGGACCTGGTTCAGTAAGTGCTTCTGGTATGC TAGGTGTGGAACTAGCACCCACTAAGGTTAGAGGACTTGTTCAGTCTTTAACAGTAGCTTCTGGTAGAATAGGAGCAGCA CTAACAGCTTTCGTCTTTCCAGCTTTATTTAATACCTATGGAGAATCTTTTGCCGTAGCATTCCTAAGTTCTGTTGCATT CGTTGCGGCCGTCTTAACGTTAATTGCAGTACCGGAGACGAAAGGAAAGCCATTAGAAGTTTCTTCGCAAGAAGATCTTA TTGTTCAAGAAATTTAA
Upstream 100 bases:
>100_bases TTATTCTATTTATATCTATATAGACTAATTATATAACTATAGTTATACATGAAATAAATACATAATCTTTATAAGAATGT TAGCGGGACTCTAAAGTGAA
Downstream 100 bases:
>100_bases TTTTTTTATAAATTAATATACTTTATCCATTGGGCTCATAAATTTATTATCTTATGGAGTATAAGTATACCATAATGTTG GAAAAAATTCGTTTAGCTCA
Product: phosphate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MKLSDIFKPLDQRNFDVWHIKSLLTTGMGVFTDGYDLSSIGIVLAMVLSSFGITSKSPDYTLWQSLVSGSALIGAAVGAI IFGILSNRGRKTFYGIDVALLSIGALLQAFVSTPLELVIVRGLLGLGVGADYVLSPMIMAEYSNAKDRGKLLAFGFGLMW GFGATTAAAIALGLEALSVPTNIIWRVVLVTGAIPSASVIYLRRKIPETPRYLARIKGDVEKFREVVRTLANTDIHVNKE LKDINSFSSYFSKFWKTFLAACLLWFLFDIVAYSGILFGPTDIAKSIGINNSAIFQFVIEFGFTLPGGIIALLTLDRIGR KPMQTFGFFGMAISLLLFSLLKSSIPATTALILYGLQNLFSQAGPGSVSASGMLGVELAPTKVRGLVQSLTVASGRIGAA LTAFVFPALFNTYGESFAVAFLSSVAFVAAVLTLIAVPETKGKPLEVSSQEDLIVQEI
Sequences:
>Translated_458_residues MKLSDIFKPLDQRNFDVWHIKSLLTTGMGVFTDGYDLSSIGIVLAMVLSSFGITSKSPDYTLWQSLVSGSALIGAAVGAI IFGILSNRGRKTFYGIDVALLSIGALLQAFVSTPLELVIVRGLLGLGVGADYVLSPMIMAEYSNAKDRGKLLAFGFGLMW GFGATTAAAIALGLEALSVPTNIIWRVVLVTGAIPSASVIYLRRKIPETPRYLARIKGDVEKFREVVRTLANTDIHVNKE LKDINSFSSYFSKFWKTFLAACLLWFLFDIVAYSGILFGPTDIAKSIGINNSAIFQFVIEFGFTLPGGIIALLTLDRIGR KPMQTFGFFGMAISLLLFSLLKSSIPATTALILYGLQNLFSQAGPGSVSASGMLGVELAPTKVRGLVQSLTVASGRIGAA LTAFVFPALFNTYGESFAVAFLSSVAFVAAVLTLIAVPETKGKPLEVSSQEDLIVQEI >Mature_458_residues MKLSDIFKPLDQRNFDVWHIKSLLTTGMGVFTDGYDLSSIGIVLAMVLSSFGITSKSPDYTLWQSLVSGSALIGAAVGAI IFGILSNRGRKTFYGIDVALLSIGALLQAFVSTPLELVIVRGLLGLGVGADYVLSPMIMAEYSNAKDRGKLLAFGFGLMW GFGATTAAAIALGLEALSVPTNIIWRVVLVTGAIPSASVIYLRRKIPETPRYLARIKGDVEKFREVVRTLANTDIHVNKE LKDINSFSSYFSKFWKTFLAACLLWFLFDIVAYSGILFGPTDIAKSIGINNSAIFQFVIEFGFTLPGGIIALLTLDRIGR KPMQTFGFFGMAISLLLFSLLKSSIPATTALILYGLQNLFSQAGPGSVSASGMLGVELAPTKVRGLVQSLTVASGRIGAA LTAFVFPALFNTYGESFAVAFLSSVAFVAAVLTLIAVPETKGKPLEVSSQEDLIVQEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI4507005, Length=447, Percent_Identity=23.7136465324385, Blast_Score=66, Evalue=8e-11, Organism=Escherichia coli, GI1786229, Length=456, Percent_Identity=26.9736842105263, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI87082159, Length=449, Percent_Identity=26.5033407572383, Blast_Score=105, Evalue=5e-24, Organism=Escherichia coli, GI1790463, Length=424, Percent_Identity=25.9433962264151, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1789207, Length=435, Percent_Identity=26.4367816091954, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1789312, Length=433, Percent_Identity=25.8660508083141, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI87082231, Length=257, Percent_Identity=27.6264591439689, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17565978, Length=363, Percent_Identity=26.4462809917355, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17565976, Length=318, Percent_Identity=27.3584905660377, Blast_Score=79, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6323512, Length=517, Percent_Identity=24.1779497098646, Blast_Score=122, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6319941, Length=464, Percent_Identity=27.3706896551724, Blast_Score=115, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6324469, Length=413, Percent_Identity=22.5181598062954, Blast_Score=81, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6320705, Length=423, Percent_Identity=22.2222222222222, Blast_Score=80, Evalue=7e-16, Organism=Saccharomyces cerevisiae, GI6324400, Length=414, Percent_Identity=24.3961352657005, Blast_Score=70, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6320766, Length=414, Percent_Identity=24.3961352657005, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6323110, Length=472, Percent_Identity=24.5762711864407, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322618, Length=429, Percent_Identity=23.3100233100233, Blast_Score=63, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 49081; Mature: 49081
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSDIFKPLDQRNFDVWHIKSLLTTGMGVFTDGYDLSSIGIVLAMVLSSFGITSKSPDY CCCHHHHHHHHCCCCCHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCH TLWQSLVSGSALIGAAVGAIIFGILSNRGRKTFYGIDVALLSIGALLQAFVSTPLELVIV HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHH RGLLGLGVGADYVLSPMIMAEYSNAKDRGKLLAFGFGLMWGFGATTAAAIALGLEALSVP HHHHHCCCCHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCH TNIIWRVVLVTGAIPSASVIYLRRKIPETPRYLARIKGDVEKFREVVRTLANTDIHVNKE HHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECHH LKDINSFSSYFSKFWKTFLAACLLWFLFDIVAYSGILFGPTDIAKSIGINNSAIFQFVIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHCCCHHHHHHHHHH FGFTLPGGIIALLTLDRIGRKPMQTFGFFGMAISLLLFSLLKSSIPATTALILYGLQNLF HCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SQAGPGSVSASGMLGVELAPTKVRGLVQSLTVASGRIGAALTAFVFPALFNTYGESFAVA HCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FLSSVAFVAAVLTLIAVPETKGKPLEVSSQEDLIVQEI HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCC >Mature Secondary Structure MKLSDIFKPLDQRNFDVWHIKSLLTTGMGVFTDGYDLSSIGIVLAMVLSSFGITSKSPDY CCCHHHHHHHHCCCCCHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCH TLWQSLVSGSALIGAAVGAIIFGILSNRGRKTFYGIDVALLSIGALLQAFVSTPLELVIV HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHH RGLLGLGVGADYVLSPMIMAEYSNAKDRGKLLAFGFGLMWGFGATTAAAIALGLEALSVP HHHHHCCCCHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCH TNIIWRVVLVTGAIPSASVIYLRRKIPETPRYLARIKGDVEKFREVVRTLANTDIHVNKE HHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECHH LKDINSFSSYFSKFWKTFLAACLLWFLFDIVAYSGILFGPTDIAKSIGINNSAIFQFVIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHCCCHHHHHHHHHH FGFTLPGGIIALLTLDRIGRKPMQTFGFFGMAISLLLFSLLKSSIPATTALILYGLQNLF HCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SQAGPGSVSASGMLGVELAPTKVRGLVQSLTVASGRIGAALTAFVFPALFNTYGESFAVA HCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FLSSVAFVAAVLTLIAVPETKGKPLEVSSQEDLIVQEI HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1630901; 9278503 [H]