| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15922732
Identifier: 15922732
GI number: 15922732
Start: 2403291
End: 2404880
Strand: Direct
Name: 15922732
Synonym: ST2401
Alternate gene names: NA
Gene position: 2403291-2404880 (Clockwise)
Preceding gene: 15922728
Following gene: 15922733
Centisome position: 89.18
GC content: 36.35
Gene sequence:
>1590_bases ATGAAGAGAGAGTGGGATGTCATTTTAACCGCAGATAGAGGTTCGTTTACTGATTATGGAGGCTCTAGTGTATTAGGTTA TGTAGCTTGTATGCCATATAGACTAGTACCCAGGTTCTTTATGGATAGGTTCTTTACACCTCCAATTAAAGTTGATAAAG ACGGTAAAGCTATATATGCACCTTATGCCCTAAGAAAGGTTGAAGCGTCTCTACTCTCTCATGGTTTTAATGTAGCAGTA ATTCCCCCAGAGTATTTAGAAAAATCCGTAAGTGAGAAGACTAAAGTTTTAGGTTTAACTGTTCATGACCCGTTTGGTTT AAACCCAGTGTCATTCAAACTCTCTATGCTTTTTGGCGGAGGTGCAACTTGGACTGCCAAGTTCTTTGAAGAACTTGGAG AAGAAGTAAAAAAGTTAAAGGCTAAATATAATTTTAAGGTAATTGTTGGTGGGCCAGGAGCTTGGGAATTACTTAATAAA AAGCCTGAGTGGATAGATACTGTCTTTATCGGTGAAGCAGAACTCACATTACCAGAAGTTGTAAAGAAGCTAATGGATGG TGAAGAGGTACCTACAATTGTTAGAGGTAAGGATCCTAAGGTTGACCAAATACCCCCAATAGTTAACCCAGCAAGACTTG GAGAGGTTCAAATAACTAGAGGTTGTCCTAGAGGTTGTCAATTTTGTTCTATAACTCCAGAAACTTTCAGATCTATGCCT CTTGATGTAATTAAAAAAGAAGTTGAGGTTAATATGAAGGGTGGATGGAATCGGGTTGAGTTTATTACTGATGATGTAAT GCTTTATGGTTCTCAAAAGCTTAGAACTAATCATGATGCTATCGTTAGGCTATTTACTGAAGTTATGAATATGGGTGTTG ATGGAATATGGTGGCCTCATATTTCTGCTCCAGCAGTTAAGGAAAGTCCTAAGACTGTTAAAGCAATGGCTGAGATTGCG AGGTATAGTTTTGATAGGGCTGTAGCACCAGTAGTTGGTTTAGAGACTGGTAGTGTAAAGATTATGGAGAAATATATGAG GGCAAAGGCTTTTCCATGGACTCCAAAAGATTGGGCTGATGTCATAATTGATGCTACTGCTATTATGAATGATAATTATA TCTTCCCATGTTATACAATGACAATTGGTTACCCAGAAGAAACTGACGAAGATGTCCAACAATCTGTTGATCTAGTTCAG AAGATAATTGACCATGGATTCATAGCTTGGGTATTTCCATTACCAGTAATTCCTATGGCTACTACAAGGATAAGGGATAA TCCATTCCCGTTCATGGAAAGATTACCTTCGAAATACTGGGATTTACTCTACATGAGTTGGAAGTATAATTTCAAAATTA CTAGGCAATTAATTCCTATATTGACTAGTGGGATAAAGAATAATGTAGCTAAAAGGATTGTGAAAATAATGATTGATAGA GTCTTTGACTCCATAGATCAAATATTTTATGAATTAAAGGAAACCAAGGGTAAAAAATCGATGGAGTTTTCAAGTATTAA CTTAAACAACACTATTGGTGTTATAAAATCTATATATTGGTTAACTAGGCTAGCTTTCAAAAATCAATAA
Upstream 100 bases:
>100_bases AAATGACACTAAACAGCATATTTCCAACATGATAATTTGAACTTTTAGTAATTCTTTCAAAGAAAGGTTTATTTGGATCC GAACAAAACATATATATTTG
Downstream 100 bases:
>100_bases AATATCAAGATATTTCTCTTTTTTCAAAAAGTTTATTAACTTACTCTCCTTCTAACATATAATGAATAAATATCAGATAA TTTCCGTTGTTATCGGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MKREWDVILTADRGSFTDYGGSSVLGYVACMPYRLVPRFFMDRFFTPPIKVDKDGKAIYAPYALRKVEASLLSHGFNVAV IPPEYLEKSVSEKTKVLGLTVHDPFGLNPVSFKLSMLFGGGATWTAKFFEELGEEVKKLKAKYNFKVIVGGPGAWELLNK KPEWIDTVFIGEAELTLPEVVKKLMDGEEVPTIVRGKDPKVDQIPPIVNPARLGEVQITRGCPRGCQFCSITPETFRSMP LDVIKKEVEVNMKGGWNRVEFITDDVMLYGSQKLRTNHDAIVRLFTEVMNMGVDGIWWPHISAPAVKESPKTVKAMAEIA RYSFDRAVAPVVGLETGSVKIMEKYMRAKAFPWTPKDWADVIIDATAIMNDNYIFPCYTMTIGYPEETDEDVQQSVDLVQ KIIDHGFIAWVFPLPVIPMATTRIRDNPFPFMERLPSKYWDLLYMSWKYNFKITRQLIPILTSGIKNNVAKRIVKIMIDR VFDSIDQIFYELKETKGKKSMEFSSINLNNTIGVIKSIYWLTRLAFKNQ
Sequences:
>Translated_529_residues MKREWDVILTADRGSFTDYGGSSVLGYVACMPYRLVPRFFMDRFFTPPIKVDKDGKAIYAPYALRKVEASLLSHGFNVAV IPPEYLEKSVSEKTKVLGLTVHDPFGLNPVSFKLSMLFGGGATWTAKFFEELGEEVKKLKAKYNFKVIVGGPGAWELLNK KPEWIDTVFIGEAELTLPEVVKKLMDGEEVPTIVRGKDPKVDQIPPIVNPARLGEVQITRGCPRGCQFCSITPETFRSMP LDVIKKEVEVNMKGGWNRVEFITDDVMLYGSQKLRTNHDAIVRLFTEVMNMGVDGIWWPHISAPAVKESPKTVKAMAEIA RYSFDRAVAPVVGLETGSVKIMEKYMRAKAFPWTPKDWADVIIDATAIMNDNYIFPCYTMTIGYPEETDEDVQQSVDLVQ KIIDHGFIAWVFPLPVIPMATTRIRDNPFPFMERLPSKYWDLLYMSWKYNFKITRQLIPILTSGIKNNVAKRIVKIMIDR VFDSIDQIFYELKETKGKKSMEFSSINLNNTIGVIKSIYWLTRLAFKNQ >Mature_529_residues MKREWDVILTADRGSFTDYGGSSVLGYVACMPYRLVPRFFMDRFFTPPIKVDKDGKAIYAPYALRKVEASLLSHGFNVAV IPPEYLEKSVSEKTKVLGLTVHDPFGLNPVSFKLSMLFGGGATWTAKFFEELGEEVKKLKAKYNFKVIVGGPGAWELLNK KPEWIDTVFIGEAELTLPEVVKKLMDGEEVPTIVRGKDPKVDQIPPIVNPARLGEVQITRGCPRGCQFCSITPETFRSMP LDVIKKEVEVNMKGGWNRVEFITDDVMLYGSQKLRTNHDAIVRLFTEVMNMGVDGIWWPHISAPAVKESPKTVKAMAEIA RYSFDRAVAPVVGLETGSVKIMEKYMRAKAFPWTPKDWADVIIDATAIMNDNYIFPCYTMTIGYPEETDEDVQQSVDLVQ KIIDHGFIAWVFPLPVIPMATTRIRDNPFPFMERLPSKYWDLLYMSWKYNFKITRQLIPILTSGIKNNVAKRIVKIMIDR VFDSIDQIFYELKETKGKKSMEFSSINLNNTIGVIKSIYWLTRLAFKNQ
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 60259; Mature: 60259
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKREWDVILTADRGSFTDYGGSSVLGYVACMPYRLVPRFFMDRFFTPPIKVDKDGKAIYA CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEC PYALRKVEASLLSHGFNVAVIPPEYLEKSVSEKTKVLGLTVHDPFGLNPVSFKLSMLFGG HHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCHHEEEEEEEECCCCCCHHHEEEEEEECC GATWTAKFFEELGEEVKKLKAKYNFKVIVGGPGAWELLNKKPEWIDTVFIGEAELTLPEV CCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHCCCCCCEEEEEECCCCCCHHHH VKKLMDGEEVPTIVRGKDPKVDQIPPIVNPARLGEVQITRGCPRGCQFCSITPETFRSMP HHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEECCCHHHHHCCC LDVIKKEVEVNMKGGWNRVEFITDDVMLYGSQKLRTNHDAIVRLFTEVMNMGVDGIWWPH HHHHHHHHEEEECCCCCEEEEEECCCCEECCHHHCCCHHHHHHHHHHHHHCCCCCEECCC ISAPAVKESPKTVKAMAEIARYSFDRAVAPVVGLETGSVKIMEKYMRAKAFPWTPKDWAD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHCCCCCCCCHHHH VIIDATAIMNDNYIFPCYTMTIGYPEETDEDVQQSVDLVQKIIDHGFIAWVFPLPVIPMA HHEEHHHEECCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHCCCCCCC TTRIRDNPFPFMERLPSKYWDLLYMSWKYNFKITRQLIPILTSGIKNNVAKRIVKIMIDR HHHCCCCCCHHHHHCCHHHHHEEEEEEEECEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH VFDSIDQIFYELKETKGKKSMEFSSINLNNTIGVIKSIYWLTRLAFKNQ HHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKREWDVILTADRGSFTDYGGSSVLGYVACMPYRLVPRFFMDRFFTPPIKVDKDGKAIYA CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEC PYALRKVEASLLSHGFNVAVIPPEYLEKSVSEKTKVLGLTVHDPFGLNPVSFKLSMLFGG HHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCHHEEEEEEEECCCCCCHHHEEEEEEECC GATWTAKFFEELGEEVKKLKAKYNFKVIVGGPGAWELLNKKPEWIDTVFIGEAELTLPEV CCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHCCCCCCEEEEEECCCCCCHHHH VKKLMDGEEVPTIVRGKDPKVDQIPPIVNPARLGEVQITRGCPRGCQFCSITPETFRSMP HHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEECCCHHHHHCCC LDVIKKEVEVNMKGGWNRVEFITDDVMLYGSQKLRTNHDAIVRLFTEVMNMGVDGIWWPH HHHHHHHHEEEECCCCCEEEEEECCCCEECCHHHCCCHHHHHHHHHHHHHCCCCCEECCC ISAPAVKESPKTVKAMAEIARYSFDRAVAPVVGLETGSVKIMEKYMRAKAFPWTPKDWAD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHCCCCCCCCHHHH VIIDATAIMNDNYIFPCYTMTIGYPEETDEDVQQSVDLVQKIIDHGFIAWVFPLPVIPMA HHEEHHHEECCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHCCCCCCC TTRIRDNPFPFMERLPSKYWDLLYMSWKYNFKITRQLIPILTSGIKNNVAKRIVKIMIDR HHHCCCCCCHHHHHCCHHHHHEEEEEEEECEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH VFDSIDQIFYELKETKGKKSMEFSSINLNNTIGVIKSIYWLTRLAFKNQ HHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]