| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is kefA [C]
Identifier: 15922713
GI number: 15922713
Start: 2382945
End: 2383814
Strand: Direct
Name: kefA [C]
Synonym: ST2382
Alternate gene names: 15922713
Gene position: 2382945-2383814 (Clockwise)
Preceding gene: 15922712
Following gene: 15922714
Centisome position: 88.43
GC content: 31.49
Gene sequence:
>870_bases ATGAGCTACAGGCTTCAAGTGGTTAAAATACTATTGATTATCTTAATACTAGCAATTTTAGACTTCGTTTTAACTTATTT GGTTCAACTCCTTACAGAAGCTTATCCTAAACAACTTTTACCTTATGAGCCGGCAATAATAACTGGTATCCATGTGATAA TAGTAGCTATAGGCGGTTATTATATTATAAAATTCATACAAGGAATTTTATCAATAACAGTTTACGCTAAGATCGAAAAA GGAATGGCAGGGATGATAAAATTTGCATTAGATGTAATATTTTACACACTTTTAGTCTTGGCAATATTAGTTGTACTTCA TGTAAATCTAACTGGAGTATTAGTAGGTAGTGCAGTAGGCGGTATAGTAATTGGTTTAGCTGTGCAAACTATTGCCCAGA ACTTATTATCTGGCGTTCTTGTAACCTCAAGTAAAACAATAAAACCTGGAGATTCGGTATCTTTACTTTCATGGATATGG GGAAATCCAATTATAGGGGAAGTAACAAAAGTATCTTTACTTTTCACTGAAATAAAAAGTATTACTGGTAATATCTTTAA AATACCCAACTCTGCTTTTCTAGGAAATACTGTTTTTCAGAAATTAGAATCTGAAAATTCACTTGTATATCCGCTACAAG TTATAGTTAATGCAGATGTATCAGCAGATAAAGTTCTTGAAAGAGTTAAAGATATATTAAAGGATAAAATTAAGGATGAG ACAAAGGTTGAAGTGTACTTCACTTCTAAAAATGGAGGAACTAACGTATTTACTGCTGTTATTCATTTCCAAAAAATAGA TGAACTTCGAGGGTTAATAGATTTAGTTAATTCTGCATTCGATAAAGCTTATTGGAGTGCTAAATCATGA
Upstream 100 bases:
>100_bases TTTCGACTTTGGTCAAATAGCCTTGATAATTTTCTTTTATCGTTTATATAAAAATATAAAAACAAGAAGGACTTATAAAT CAGTATAATAATTTCTTTTT
Downstream 100 bases:
>100_bases TAGTTAAAATCATTAAAGGAGATATAACTGAAATTGAAGCTGAAGCTATAGTTAATGCTGCAAATTCCTATTTAGAACAT GGTGGAGGAGTAGCTAGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Small-Conductance Mechanosensitive Channel Protein; Mechanosensitive Ion Channel
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSYRLQVVKILLIILILAILDFVLTYLVQLLTEAYPKQLLPYEPAIITGIHVIIVAIGGYYIIKFIQGILSITVYAKIEK GMAGMIKFALDVIFYTLLVLAILVVLHVNLTGVLVGSAVGGIVIGLAVQTIAQNLLSGVLVTSSKTIKPGDSVSLLSWIW GNPIIGEVTKVSLLFTEIKSITGNIFKIPNSAFLGNTVFQKLESENSLVYPLQVIVNADVSADKVLERVKDILKDKIKDE TKVEVYFTSKNGGTNVFTAVIHFQKIDELRGLIDLVNSAFDKAYWSAKS
Sequences:
>Translated_289_residues MSYRLQVVKILLIILILAILDFVLTYLVQLLTEAYPKQLLPYEPAIITGIHVIIVAIGGYYIIKFIQGILSITVYAKIEK GMAGMIKFALDVIFYTLLVLAILVVLHVNLTGVLVGSAVGGIVIGLAVQTIAQNLLSGVLVTSSKTIKPGDSVSLLSWIW GNPIIGEVTKVSLLFTEIKSITGNIFKIPNSAFLGNTVFQKLESENSLVYPLQVIVNADVSADKVLERVKDILKDKIKDE TKVEVYFTSKNGGTNVFTAVIHFQKIDELRGLIDLVNSAFDKAYWSAKS >Mature_288_residues SYRLQVVKILLIILILAILDFVLTYLVQLLTEAYPKQLLPYEPAIITGIHVIIVAIGGYYIIKFIQGILSITVYAKIEKG MAGMIKFALDVIFYTLLVLAILVVLHVNLTGVLVGSAVGGIVIGLAVQTIAQNLLSGVLVTSSKTIKPGDSVSLLSWIWG NPIIGEVTKVSLLFTEIKSITGNIFKIPNSAFLGNTVFQKLESENSLVYPLQVIVNADVSADKVLERVKDILKDKIKDET KVEVYFTSKNGGTNVFTAVIHFQKIDELRGLIDLVNSAFDKAYWSAKS
Specific function: Unknown
COG id: COG0668
COG function: function code M; Small-conductance mechanosensitive channel
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31657; Mature: 31526
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYRLQVVKILLIILILAILDFVLTYLVQLLTEAYPKQLLPYEPAIITGIHVIIVAIGGY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH YIIKFIQGILSITVYAKIEKGMAGMIKFALDVIFYTLLVLAILVVLHVNLTGVLVGSAVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIVIGLAVQTIAQNLLSGVLVTSSKTIKPGDSVSLLSWIWGNPIIGEVTKVSLLFTEIKS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH ITGNIFKIPNSAFLGNTVFQKLESENSLVYPLQVIVNADVSADKVLERVKDILKDKIKDE HCCCEEECCCCHHHHHHHHHHHHCCCCEEEEEHEEEECCCCHHHHHHHHHHHHHHHCCCC TKVEVYFTSKNGGTNVFTAVIHFQKIDELRGLIDLVNSAFDKAYWSAKS CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SYRLQVVKILLIILILAILDFVLTYLVQLLTEAYPKQLLPYEPAIITGIHVIIVAIGGY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH YIIKFIQGILSITVYAKIEKGMAGMIKFALDVIFYTLLVLAILVVLHVNLTGVLVGSAVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIVIGLAVQTIAQNLLSGVLVTSSKTIKPGDSVSLLSWIWGNPIIGEVTKVSLLFTEIKS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH ITGNIFKIPNSAFLGNTVFQKLESENSLVYPLQVIVNADVSADKVLERVKDILKDKIKDE HCCCEEECCCCHHHHHHHHHHHHCCCCEEEEEHEEEECCCCHHHHHHHHHHHHHHHCCCC TKVEVYFTSKNGGTNVFTAVIHFQKIDELRGLIDLVNSAFDKAYWSAKS CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA