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The map label for this gene is 15922611

Identifier: 15922611

GI number: 15922611

Start: 2287204

End: 2288850

Strand: Direct

Name: 15922611

Synonym: ST2280

Alternate gene names: NA

Gene position: 2287204-2288850 (Clockwise)

Preceding gene: 15922609

Following gene: 15922612

Centisome position: 84.88

GC content: 29.81

Gene sequence:

>1647_bases
GTGGAGTTAAGAGATTGGCAAAAGCAATTAAAAGATAAAGTAATAAATGCTGTCAAAGAAGGTTTTTTAGTCGCATTAAA
CTCCCCTACGGGGAGTGGTAAAACACTTTTTTCTCTTTTAGTTGGTCTTAATACTAAGGGTAAAGTGATCTTTGTAGTTA
GAACGCATAATGAATATTTTCCAGTATATAGGGATGTAAAGAAAATTGATCCTTCTCTAAAATTTTCGTTTGTTATAGGT
AAGCCTAGTGCTTGTCCCTTTGCAGCTAAGGATGTAGATACTGAAGATATTAATTGTAAATACTGTGAGATAAAAAATGC
TATAGAAGTTAAAATAGATAAATCCCCTTTTGAGAAACTTAAAGAATTAAAAGAAAATGGTATAAAAGAAGGGTTCTGTC
CCTATTATTCTCTGTTAGAATCAGCAAAGGAAGCTGATATCATTACAATAACGTACCCTTATTTTTTTATTGAAAAATAT
CTTAGTTTACTTGACATCAACTTAGAAGAATATTTCATAGTAATAGATGAGGCTCATAATATAGATAAAGTAAGTGAAAT
TGAGGAAAGAACACTAAGTGAATTTATTCTCTCAATGGCAATAAAACAGAGCAAGAGCGAAGAAGTAAGAAGGATATTAG
ATAGACTCATAAAAGAGTTAAAAACTCTAACTTATCAAGATGAAAAATATATAAAATTAGATAAAGTGCCTGAGTTGTCA
GATGAGGAACTCTCACTGTTAGTTGATGAGTACGAAGAATTAAGAAAAGAGGCAATAAAATCGAAAAGCGTGTCTAGAAT
CTATCTGGGCTCTGTGATCCGTTTTTACGCTACGTATTCTACTGGAAATTTTATACCTTTTTCTTTTTCTAATAAAATTG
TCCTAAAAACATTAGAGCTAAACCAATATTACAACTTACTAAATGATGAAAATCTTTCTATTTTATTAATGTCCGGTACT
TTACCACCAAAGGAATACTTAGAGAAAGTAATAGGAATTTCTAGAAAAATTTTATATATAAACGTAGAGAAAGAAGTAAA
GAAAAAAGTAACAGGCAGTTATCAATGTAAAATAGCGATAGATGTGACTTCTAAATACGATCTAAGAAGTGAAGCAATGT
GGAAAAAATATTCCTCGTATTTGTTAAAAATTTACTATCAAGCTAGAAATCATGTGTTAGCAGTATTTCCATCTTATCAG
ATAATGGAAAAAGTAATGAGTTATGTTAATGTAAATAAAATCTTAGAAAATGAAGGAACAAGAATTGATGATGTTATAAA
AATAGTTAAAGAGAGCAGACAAAAATATATAATAGCTGGCGTAGGAAGAGGAAAAATAACTGAGGGTGTAGAGATAACGG
ATAATGATAGAAGTTTAATTTCAGATGTAGTCTTAGTTGGTGTCCCTTATCCTCCAGAAGATGATTATATGAAATTACTT
TCTAAGAAAATTTCAGAAAAACTGGGAGGAAAAGAGAAAGAATATCTAATAATGATACCGGCTTTAATTACTGTAAAACA
AGCTATAGGTAGGTCTATAAGAAATATAAATGATACTGCATTAGTTTGGTTACTAGATAAACGATATGATTCCTTATGGT
GGAAGAAAAACCTAAATTGTTTTAATTCAACAAAAATAAGGCTATGA

Upstream 100 bases:

>100_bases
AAAAGCAAAAGCTAAAGATTTACTTACTTTGGCTGAAAAGGATTACGTTAAATTCATTATGTTAGAAGAAGTTTTAGCTA
AGCTTGAAGAATTTTAAAAA

Downstream 100 bases:

>100_bases
AAGTAGAAATATTTACTCACAAGAATTGTATTGAGTGTAATTTTCTAATTGAATTTTTAGAAAAGAAAGGACTTTTGAGT
AAGGTAACGATAATTGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 548; Mature: 548

Protein sequence:

>548_residues
MELRDWQKQLKDKVINAVKEGFLVALNSPTGSGKTLFSLLVGLNTKGKVIFVVRTHNEYFPVYRDVKKIDPSLKFSFVIG
KPSACPFAAKDVDTEDINCKYCEIKNAIEVKIDKSPFEKLKELKENGIKEGFCPYYSLLESAKEADIITITYPYFFIEKY
LSLLDINLEEYFIVIDEAHNIDKVSEIEERTLSEFILSMAIKQSKSEEVRRILDRLIKELKTLTYQDEKYIKLDKVPELS
DEELSLLVDEYEELRKEAIKSKSVSRIYLGSVIRFYATYSTGNFIPFSFSNKIVLKTLELNQYYNLLNDENLSILLMSGT
LPPKEYLEKVIGISRKILYINVEKEVKKKVTGSYQCKIAIDVTSKYDLRSEAMWKKYSSYLLKIYYQARNHVLAVFPSYQ
IMEKVMSYVNVNKILENEGTRIDDVIKIVKESRQKYIIAGVGRGKITEGVEITDNDRSLISDVVLVGVPYPPEDDYMKLL
SKKISEKLGGKEKEYLIMIPALITVKQAIGRSIRNINDTALVWLLDKRYDSLWWKKNLNCFNSTKIRL

Sequences:

>Translated_548_residues
MELRDWQKQLKDKVINAVKEGFLVALNSPTGSGKTLFSLLVGLNTKGKVIFVVRTHNEYFPVYRDVKKIDPSLKFSFVIG
KPSACPFAAKDVDTEDINCKYCEIKNAIEVKIDKSPFEKLKELKENGIKEGFCPYYSLLESAKEADIITITYPYFFIEKY
LSLLDINLEEYFIVIDEAHNIDKVSEIEERTLSEFILSMAIKQSKSEEVRRILDRLIKELKTLTYQDEKYIKLDKVPELS
DEELSLLVDEYEELRKEAIKSKSVSRIYLGSVIRFYATYSTGNFIPFSFSNKIVLKTLELNQYYNLLNDENLSILLMSGT
LPPKEYLEKVIGISRKILYINVEKEVKKKVTGSYQCKIAIDVTSKYDLRSEAMWKKYSSYLLKIYYQARNHVLAVFPSYQ
IMEKVMSYVNVNKILENEGTRIDDVIKIVKESRQKYIIAGVGRGKITEGVEITDNDRSLISDVVLVGVPYPPEDDYMKLL
SKKISEKLGGKEKEYLIMIPALITVKQAIGRSIRNINDTALVWLLDKRYDSLWWKKNLNCFNSTKIRL
>Mature_548_residues
MELRDWQKQLKDKVINAVKEGFLVALNSPTGSGKTLFSLLVGLNTKGKVIFVVRTHNEYFPVYRDVKKIDPSLKFSFVIG
KPSACPFAAKDVDTEDINCKYCEIKNAIEVKIDKSPFEKLKELKENGIKEGFCPYYSLLESAKEADIITITYPYFFIEKY
LSLLDINLEEYFIVIDEAHNIDKVSEIEERTLSEFILSMAIKQSKSEEVRRILDRLIKELKTLTYQDEKYIKLDKVPELS
DEELSLLVDEYEELRKEAIKSKSVSRIYLGSVIRFYATYSTGNFIPFSFSNKIVLKTLELNQYYNLLNDENLSILLMSGT
LPPKEYLEKVIGISRKILYINVEKEVKKKVTGSYQCKIAIDVTSKYDLRSEAMWKKYSSYLLKIYYQARNHVLAVFPSYQ
IMEKVMSYVNVNKILENEGTRIDDVIKIVKESRQKYIIAGVGRGKITEGVEITDNDRSLISDVVLVGVPYPPEDDYMKLL
SKKISEKLGGKEKEYLIMIPALITVKQAIGRSIRNINDTALVWLLDKRYDSLWWKKNLNCFNSTKIRL

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6325249, Length=173, Percent_Identity=32.9479768786127, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555 [H]

Pfam domain/function: PF06733 DEAD_2 [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 63390; Mature: 63390

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELRDWQKQLKDKVINAVKEGFLVALNSPTGSGKTLFSLLVGLNTKGKVIFVVRTHNEYF
CCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCC
PVYRDVKKIDPSLKFSFVIGKPSACPFAAKDVDTEDINCKYCEIKNAIEVKIDKSPFEKL
HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCHHHHH
KELKENGIKEGFCPYYSLLESAKEADIITITYPYFFIEKYLSLLDINLEEYFIVIDEAHN
HHHHHCCCCCCCCHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCCCCEEEEEECCCC
IDKVSEIEERTLSEFILSMAIKQSKSEEVRRILDRLIKELKTLTYQDEKYIKLDKVPELS
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
DEELSLLVDEYEELRKEAIKSKSVSRIYLGSVIRFYATYSTGNFIPFSFSNKIVLKTLEL
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCCEEEEECCCEEEEEEEEH
NQYYNLLNDENLSILLMSGTLPPKEYLEKVIGISRKILYINVEKEVKKKVTGSYQCKIAI
HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECHHHHHHHCCCCEEEEEEE
DVTSKYDLRSEAMWKKYSSYLLKIYYQARNHVLAVFPSYQIMEKVMSYVNVNKILENEGT
EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCC
RIDDVIKIVKESRQKYIIAGVGRGKITEGVEITDNDRSLISDVVLVGVPYPPEDDYMKLL
CHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEECCCHHHHHHHHEEECCCCCCHHHHHHH
SKKISEKLGGKEKEYLIMIPALITVKQAIGRSIRNINDTALVWLLDKRYDSLWWKKNLNC
HHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHCCCCC
FNSTKIRL
CCCCCCCC
>Mature Secondary Structure
MELRDWQKQLKDKVINAVKEGFLVALNSPTGSGKTLFSLLVGLNTKGKVIFVVRTHNEYF
CCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCC
PVYRDVKKIDPSLKFSFVIGKPSACPFAAKDVDTEDINCKYCEIKNAIEVKIDKSPFEKL
HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCHHHHH
KELKENGIKEGFCPYYSLLESAKEADIITITYPYFFIEKYLSLLDINLEEYFIVIDEAHN
HHHHHCCCCCCCCHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCCCCEEEEEECCCC
IDKVSEIEERTLSEFILSMAIKQSKSEEVRRILDRLIKELKTLTYQDEKYIKLDKVPELS
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
DEELSLLVDEYEELRKEAIKSKSVSRIYLGSVIRFYATYSTGNFIPFSFSNKIVLKTLEL
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCCEEEEECCCEEEEEEEEH
NQYYNLLNDENLSILLMSGTLPPKEYLEKVIGISRKILYINVEKEVKKKVTGSYQCKIAI
HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECHHHHHHHCCCCEEEEEEE
DVTSKYDLRSEAMWKKYSSYLLKIYYQARNHVLAVFPSYQIMEKVMSYVNVNKILENEGT
EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCC
RIDDVIKIVKESRQKYIIAGVGRGKITEGVEITDNDRSLISDVVLVGVPYPPEDDYMKLL
CHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEECCCHHHHHHHHEEECCCCCCHHHHHHH
SKKISEKLGGKEKEYLIMIPALITVKQAIGRSIRNINDTALVWLLDKRYDSLWWKKNLNC
HHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHCCCCC
FNSTKIRL
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA