| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is gltB [C]
Identifier: 15922526
GI number: 15922526
Start: 2205306
End: 2207213
Strand: Direct
Name: gltB [C]
Synonym: ST2198
Alternate gene names: 15922526
Gene position: 2205306-2207213 (Clockwise)
Preceding gene: 15922525
Following gene: 15922527
Centisome position: 81.84
GC content: 39.36
Gene sequence:
>1908_bases ATGTCTGCTCCACTCTATTTGGGAGATATGTCTTATGGTGCTTTAAGCGGTAATCCTAATATAATAATAGCGAGAGCTGC GGATTTAACGGGAACTTTAGCTGGTACTGGTGAGGGGGGTTTACATCCGGAAGTTGCTAAATCTAAGAGGATTTTTGTTC AATGGGCTTCAGCCCGTTTTGGTGTTGATTTTGATGTTTTAATGCATGGAGCTGGAATTGTTATTAAGATTGGACAAGGT GCTAAGCCAGGTATTGGTGGTCATTTACCCGGGAGTAAAGTTACCGAACCCATTTCTCTTACTAGACGAATACCAGTTGG TATTGATGCTATTTCTCCAGCCCCCCATCATGATATTTATTCTATTGAGGATTTGGGTCAAAGGATTGAAGCTTTGAAGG AAGCTACTGGTAAGCCTGTCTTTGTTAAGGTTGCTGCTACTAACTATATTCCTTATATAGTGTCTGGAATTGCAAGGATG GGTGCAGATGGTGTTATAATTGATGGTCATGGTGCTGGTACTGGTGCTACTCCCATTGTTATAAGGGATAATGTTGGCAT TCCGATCGAGTTAGCAGTAGCTTCAGCTGATAAGGTTTTGCGTGAACAAGGTATGAGGGATAACTTTTATATTATTGCAG CAGGTAGGGTTGCTGATGCTACTGATGCAGCTAAGTTAATTGCTTTAGGGGCGGATGTTGTTAGTGTAGGTACGGGGGCT TTGATTGCAATGGGTTGTGTTATGGTTCATAAGTGTCATATTGGTTCTTGTCCAACAGCTCTAACGAATAAGATTGACGG TAGTAGGATGGTCGACATAGATTTTGGACTTAAAGTCTTAGTTAACTATATTCATGGCTTTTCTCTCGAACTAGCTAACA TTCTGGATAATTTGGGTCTCTCAAGCATAGATGAACTTAAGGGAAGGAGGGATCTGTTAGTAGGTAAGGGTTTATCCAGG GAGACTTTGTCTGTCTTAGGTATTGAGGGAGAAGAGGAAGAATTGCCACCTAAGCTTGGCGAGTTATGGTCTAGGAGGAG AAAAGTGTATTTACATGAGTTAATCAATAAGGGCGACCCCGTGATTACCAGTATGGGTAGTACTGCACCCCCAGACGTTG AAAAACCCGCAAGGATTGTGGATTGGTTAAGAAGTGATGGTGCTCAAGTTACTAGACCTTCAATCGATCCTTATAGAGAA GATATTGATACGAGCTTTTATTTAGCTGGTGGAAGGATTTATCTCTCTTTACCAGTAATTTTTGATATTATTGATGCACC AGAAGATGAGAGAAATGCTCTACAGTGGGCTTCTTTGGCTTTAAGTTCTGCTGTATTTACTGATGTTACTCCAAGATATT ATGAAGATATTTCGATAAGTCATGATGGTAAGGGTATAATTAAATGGAGTAAGAATTATGAGAGTGGTAGTTATATCTTA TTGCCGAGTAATGAGGAGGCTCTTGAGGAAGTTGTAGAATTGAAGGGTATACCAGGTTTTATTATTGATGAGGATTTAGG TAATGAAGATCTTGAGGTCGTTATTTCAGAGATAGACACTAAGTTAAAGAGAATGGGAATAAGGAAGAAATTTGATTTAA TTGCAAAGTCTTCTAGGATAAGGGATTCGGGGGACGTTTTTAAGTTTGTTGCCTTAGGTGCAGATTCTGTTATAATATCT TATAAAGTGTTTGAAGTCGCTTTAGGAGAAGGAAGCAGAAGTGACTTGAAGAGTAAGGCATTTAATTTAATTTCTGGTTT TAAGAAAGAGATCGCTTTGTTAGCTGGCGCTGCTGGCGTTTACTCTGTTCAATCTACTTTAACCGGAAATAGAGAACTTT TAAGAGCAATAAATTTGAATTCTTATCTTTTACAAAAGCTTAGGGTTAAGGTGGCTGGTTCTCTATGA
Upstream 100 bases:
>100_bases CTCTTTAAGGATTCTTGATAGAGTTCGTTTTAAAAAAGAGGATTCTAAAATTAGTGATACTCCAAAAGCTAGGACTTTTA CTAAACTAGCTGGTATAGAA
Downstream 100 bases:
>100_bases TTCACCCATCTGGTTGTGGTGTTTTAGGTATATTAAGAAAAAAGAGTGCAAATAAGATTTCCGGTGAGATGGTAGTTAGG GGGATTGAGAGAGTAAGGTA
Product: glutamate synthase large subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 635; Mature: 634
Protein sequence:
>635_residues MSAPLYLGDMSYGALSGNPNIIIARAADLTGTLAGTGEGGLHPEVAKSKRIFVQWASARFGVDFDVLMHGAGIVIKIGQG AKPGIGGHLPGSKVTEPISLTRRIPVGIDAISPAPHHDIYSIEDLGQRIEALKEATGKPVFVKVAATNYIPYIVSGIARM GADGVIIDGHGAGTGATPIVIRDNVGIPIELAVASADKVLREQGMRDNFYIIAAGRVADATDAAKLIALGADVVSVGTGA LIAMGCVMVHKCHIGSCPTALTNKIDGSRMVDIDFGLKVLVNYIHGFSLELANILDNLGLSSIDELKGRRDLLVGKGLSR ETLSVLGIEGEEEELPPKLGELWSRRRKVYLHELINKGDPVITSMGSTAPPDVEKPARIVDWLRSDGAQVTRPSIDPYRE DIDTSFYLAGGRIYLSLPVIFDIIDAPEDERNALQWASLALSSAVFTDVTPRYYEDISISHDGKGIIKWSKNYESGSYIL LPSNEEALEEVVELKGIPGFIIDEDLGNEDLEVVISEIDTKLKRMGIRKKFDLIAKSSRIRDSGDVFKFVALGADSVIIS YKVFEVALGEGSRSDLKSKAFNLISGFKKEIALLAGAAGVYSVQSTLTGNRELLRAINLNSYLLQKLRVKVAGSL
Sequences:
>Translated_635_residues MSAPLYLGDMSYGALSGNPNIIIARAADLTGTLAGTGEGGLHPEVAKSKRIFVQWASARFGVDFDVLMHGAGIVIKIGQG AKPGIGGHLPGSKVTEPISLTRRIPVGIDAISPAPHHDIYSIEDLGQRIEALKEATGKPVFVKVAATNYIPYIVSGIARM GADGVIIDGHGAGTGATPIVIRDNVGIPIELAVASADKVLREQGMRDNFYIIAAGRVADATDAAKLIALGADVVSVGTGA LIAMGCVMVHKCHIGSCPTALTNKIDGSRMVDIDFGLKVLVNYIHGFSLELANILDNLGLSSIDELKGRRDLLVGKGLSR ETLSVLGIEGEEEELPPKLGELWSRRRKVYLHELINKGDPVITSMGSTAPPDVEKPARIVDWLRSDGAQVTRPSIDPYRE DIDTSFYLAGGRIYLSLPVIFDIIDAPEDERNALQWASLALSSAVFTDVTPRYYEDISISHDGKGIIKWSKNYESGSYIL LPSNEEALEEVVELKGIPGFIIDEDLGNEDLEVVISEIDTKLKRMGIRKKFDLIAKSSRIRDSGDVFKFVALGADSVIIS YKVFEVALGEGSRSDLKSKAFNLISGFKKEIALLAGAAGVYSVQSTLTGNRELLRAINLNSYLLQKLRVKVAGSL >Mature_634_residues SAPLYLGDMSYGALSGNPNIIIARAADLTGTLAGTGEGGLHPEVAKSKRIFVQWASARFGVDFDVLMHGAGIVIKIGQGA KPGIGGHLPGSKVTEPISLTRRIPVGIDAISPAPHHDIYSIEDLGQRIEALKEATGKPVFVKVAATNYIPYIVSGIARMG ADGVIIDGHGAGTGATPIVIRDNVGIPIELAVASADKVLREQGMRDNFYIIAAGRVADATDAAKLIALGADVVSVGTGAL IAMGCVMVHKCHIGSCPTALTNKIDGSRMVDIDFGLKVLVNYIHGFSLELANILDNLGLSSIDELKGRRDLLVGKGLSRE TLSVLGIEGEEEELPPKLGELWSRRRKVYLHELINKGDPVITSMGSTAPPDVEKPARIVDWLRSDGAQVTRPSIDPYRED IDTSFYLAGGRIYLSLPVIFDIIDAPEDERNALQWASLALSSAVFTDVTPRYYEDISISHDGKGIIKWSKNYESGSYILL PSNEEALEEVVELKGIPGFIIDEDLGNEDLEVVISEIDTKLKRMGIRKKFDLIAKSSRIRDSGDVFKFVALGADSVIISY KVFEVALGEGSRSDLKSKAFNLISGFKKEIALLAGAAGVYSVQSTLTGNRELLRAINLNSYLLQKLRVKVAGSL
Specific function: NITROGEN METABOLISM, GLUTAMATE BIOSYNTHESIS. THE CATALYZED REACTION BRINGS TOGETHER THE NITROGEN AND CARBON METABOLISM. [C]
COG id: COG0069
COG function: function code E; Glutamate synthase domain 2
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Escherichia coli, GI308199519, Length=308, Percent_Identity=37.012987012987, Blast_Score=161, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17570289, Length=315, Percent_Identity=37.4603174603175, Blast_Score=192, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6320030, Length=314, Percent_Identity=35.6687898089172, Blast_Score=175, Evalue=2e-44, Organism=Drosophila melanogaster, GI28574881, Length=314, Percent_Identity=35.6687898089172, Blast_Score=169, Evalue=4e-42, Organism=Drosophila melanogaster, GI24665539, Length=314, Percent_Identity=35.6687898089172, Blast_Score=169, Evalue=4e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013785 - InterPro: IPR002932 [H]
Pfam domain/function: PF01645 Glu_synthase [H]
EC number: =1.4.1.13 [H]
Molecular weight: Translated: 68140; Mature: 68009
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPLYLGDMSYGALSGNPNIIIARAADLTGTLAGTGEGGLHPEVAKSKRIFVQWASARF CCCCEEECCCCCCEECCCCCEEEEEECCCCEEEECCCCCCCCCHHHCCCEEEEEEECCCC GVDFDVLMHGAGIVIKIGQGAKPGIGGHLPGSKVTEPISLTRRIPVGIDAISPAPHHDIY CCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCCE SIEDLGQRIEALKEATGKPVFVKVAATNYIPYIVSGIARMGADGVIIDGHGAGTGATPIV EHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCEEE IRDNVGIPIELAVASADKVLREQGMRDNFYIIAAGRVADATDAAKLIALGADVVSVGTGA EECCCCCEEEEEECHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHCCHH LIAMGCVMVHKCHIGSCPTALTNKIDGSRMVDIDFGLKVLVNYIHGFSLELANILDNLGL HHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHCCC SSIDELKGRRDLLVGKGLSRETLSVLGIEGEEEELPPKLGELWSRRRKVYLHELINKGDP CCHHHHCCCHHEEECCCCCCCHHEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCC VITSMGSTAPPDVEKPARIVDWLRSDGAQVTRPSIDPYREDIDTSFYLAGGRIYLSLPVI EEEECCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCHHHHHCCCEEEEECCEEEEECCCH FDIIDAPEDERNALQWASLALSSAVFTDVTPRYYEDISISHDGKGIIKWSKNYESGSYIL HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCEEECCCCCEEEEECCCCCCCCEEE LPSNEEALEEVVELKGIPGFIIDEDLGNEDLEVVISEIDTKLKRMGIRKKFDLIAKSSRI EECCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC RDSGDVFKFVALGADSVIISYKVFEVALGEGSRSDLKSKAFNLISGFKKEIALLAGAAGV CCCCCEEEEEEECCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH YSVQSTLTGNRELLRAINLNSYLLQKLRVKVAGSL HHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SAPLYLGDMSYGALSGNPNIIIARAADLTGTLAGTGEGGLHPEVAKSKRIFVQWASARF CCCEEECCCCCCEECCCCCEEEEEECCCCEEEECCCCCCCCCHHHCCCEEEEEEECCCC GVDFDVLMHGAGIVIKIGQGAKPGIGGHLPGSKVTEPISLTRRIPVGIDAISPAPHHDIY CCCHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCCE SIEDLGQRIEALKEATGKPVFVKVAATNYIPYIVSGIARMGADGVIIDGHGAGTGATPIV EHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCEEE IRDNVGIPIELAVASADKVLREQGMRDNFYIIAAGRVADATDAAKLIALGADVVSVGTGA EECCCCCEEEEEECHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHCCHH LIAMGCVMVHKCHIGSCPTALTNKIDGSRMVDIDFGLKVLVNYIHGFSLELANILDNLGL HHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHCCC SSIDELKGRRDLLVGKGLSRETLSVLGIEGEEEELPPKLGELWSRRRKVYLHELINKGDP CCHHHHCCCHHEEECCCCCCCHHEEEECCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCC VITSMGSTAPPDVEKPARIVDWLRSDGAQVTRPSIDPYREDIDTSFYLAGGRIYLSLPVI EEEECCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCHHHHHCCCEEEEECCEEEEECCCH FDIIDAPEDERNALQWASLALSSAVFTDVTPRYYEDISISHDGKGIIKWSKNYESGSYIL HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCEEECCCCCEEEEECCCCCCCCEEE LPSNEEALEEVVELKGIPGFIIDEDLGNEDLEVVISEIDTKLKRMGIRKKFDLIAKSSRI EECCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC RDSGDVFKFVALGADSVIISYKVFEVALGEGSRSDLKSKAFNLISGFKKEIALLAGAAGV CCCCCEEEEEEECCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH YSVQSTLTGNRELLRAINLNSYLLQKLRVKVAGSL HHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]