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The map label for this gene is ygaF [H]

Identifier: 15922428

GI number: 15922428

Start: 2110694

End: 2111146

Strand: Direct

Name: ygaF [H]

Synonym: ST2102

Alternate gene names: 15922428

Gene position: 2110694-2111146 (Clockwise)

Preceding gene: 15922423

Following gene: 15922430

Centisome position: 78.33

GC content: 32.89

Gene sequence:

>453_bases
ATGCCACCAAATATTGGTGAACAAGCACCAGATTTTGAAGCAGAGTCAACACTAGGTAAAATTAGGCTTTCAGATTATAA
AGGTAAATTCGTAGTCCTATATTTCTATCCTAAGTCATTTACGCCAGGATGTACTAGAGAAATACAAAGATTTTCAGAAC
TCTATGAAGAGTTCAAAAAACTAAATGCAGAAGTAATAGGAGTAAGTGCCGATAGTATAACTACGCAAAAAAGGTTCGCT
GAGAAATATAATGCTAAATTCCCAGTTGTTGCAGATAAGGAAAAAAAGATAATTGAAACTTACGGAGTATTAAATGAAAA
AGGAACTAGTGCTCAAAGAGTCACCTTTATTATCGACCCAGAAGGAAAAATCATTCAAATACTCAAGAATTTAAAGAAAG
CCGAAGAACATGCTGACAAAGCTCTTGAAATAATAAAAAATAAGAAATCATGA

Upstream 100 bases:

>100_bases
TGGGTTGACATAGTCCTAGGTATCTTTCTCATTTCCTAAATAACTCGAGTTATGCCCTTTTAAACTAAACTATAAAAGTT
GGTTCGAGTTTTGATATTTT

Downstream 100 bases:

>100_bases
ATTAACAACTCGTTTATATATTTTTTTCTTAAATGATTCTATGGGATCATTTAATACAACCGGAATTTTATTTAAAATAT
CAGAAGGAGTAATATGAGGC

Product: thioredoxin peroxidase

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MPPNIGEQAPDFEAESTLGKIRLSDYKGKFVVLYFYPKSFTPGCTREIQRFSELYEEFKKLNAEVIGVSADSITTQKRFA
EKYNAKFPVVADKEKKIIETYGVLNEKGTSAQRVTFIIDPEGKIIQILKNLKKAEEHADKALEIIKNKKS

Sequences:

>Translated_150_residues
MPPNIGEQAPDFEAESTLGKIRLSDYKGKFVVLYFYPKSFTPGCTREIQRFSELYEEFKKLNAEVIGVSADSITTQKRFA
EKYNAKFPVVADKEKKIIETYGVLNEKGTSAQRVTFIIDPEGKIIQILKNLKKAEEHADKALEIIKNKKS
>Mature_149_residues
PPNIGEQAPDFEAESTLGKIRLSDYKGKFVVLYFYPKSFTPGCTREIQRFSELYEEFKKLNAEVIGVSADSITTQKRFAE
KYNAKFPVVADKEKKIIETYGVLNEKGTSAQRVTFIIDPEGKIIQILKNLKKAEEHADKALEIIKNKKS

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI32189392, Length=153, Percent_Identity=39.8692810457516, Blast_Score=101, Evalue=2e-22,
Organism=Homo sapiens, GI4505591, Length=154, Percent_Identity=38.961038961039, Blast_Score=97, Evalue=4e-21,
Organism=Homo sapiens, GI32455266, Length=154, Percent_Identity=38.961038961039, Blast_Score=97, Evalue=4e-21,
Organism=Homo sapiens, GI32455264, Length=154, Percent_Identity=38.961038961039, Blast_Score=97, Evalue=4e-21,
Organism=Homo sapiens, GI5802974, Length=155, Percent_Identity=33.5483870967742, Blast_Score=86, Evalue=1e-17,
Organism=Homo sapiens, GI32483377, Length=151, Percent_Identity=34.4370860927152, Blast_Score=84, Evalue=4e-17,
Organism=Homo sapiens, GI4758638, Length=137, Percent_Identity=32.8467153284672, Blast_Score=84, Evalue=4e-17,
Organism=Homo sapiens, GI5453549, Length=153, Percent_Identity=32.0261437908497, Blast_Score=83, Evalue=1e-16,
Organism=Homo sapiens, GI33188454, Length=82, Percent_Identity=48.780487804878, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1788825, Length=152, Percent_Identity=33.5526315789474, Blast_Score=98, Evalue=2e-22,
Organism=Escherichia coli, GI1786822, Length=109, Percent_Identity=31.1926605504587, Blast_Score=65, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193204376, Length=153, Percent_Identity=36.6013071895425, Blast_Score=92, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI32565831, Length=153, Percent_Identity=36.6013071895425, Blast_Score=92, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17554494, Length=129, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6319407, Length=157, Percent_Identity=29.9363057324841, Blast_Score=83, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6323613, Length=157, Percent_Identity=33.1210191082803, Blast_Score=75, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6320661, Length=157, Percent_Identity=33.7579617834395, Blast_Score=74, Evalue=7e-15,
Organism=Saccharomyces cerevisiae, GI6322180, Length=117, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=3e-13,
Organism=Drosophila melanogaster, GI17738015, Length=153, Percent_Identity=37.2549019607843, Blast_Score=95, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21357347, Length=154, Percent_Identity=35.7142857142857, Blast_Score=94, Evalue=3e-20,
Organism=Drosophila melanogaster, GI17157991, Length=155, Percent_Identity=36.7741935483871, Blast_Score=94, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24641739, Length=155, Percent_Identity=36.7741935483871, Blast_Score=94, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24656348, Length=153, Percent_Identity=37.9084967320261, Blast_Score=90, Evalue=5e-19,
Organism=Drosophila melanogaster, GI17864676, Length=153, Percent_Identity=37.9084967320261, Blast_Score=90, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24581278, Length=135, Percent_Identity=28.1481481481481, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24652434, Length=136, Percent_Identity=28.6764705882353, Blast_Score=74, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24652436, Length=136, Percent_Identity=28.6764705882353, Blast_Score=74, Evalue=5e-14,
Organism=Drosophila melanogaster, GI17975518, Length=136, Percent_Identity=27.9411764705882, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 17067; Mature: 16936

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPNIGEQAPDFEAESTLGKIRLSDYKGKFVVLYFYPKSFTPGCTREIQRFSELYEEFKK
CCCCCCCCCCCCCCHHHHCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
LNAEVIGVSADSITTQKRFAEKYNAKFPVVADKEKKIIETYGVLNEKGTSAQRVTFIIDP
CCCEEEEECCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCCCCCCCCEEEEEEECC
EGKIIQILKNLKKAEEHADKALEIIKNKKS
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PPNIGEQAPDFEAESTLGKIRLSDYKGKFVVLYFYPKSFTPGCTREIQRFSELYEEFKK
CCCCCCCCCCCCCHHHHCEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
LNAEVIGVSADSITTQKRFAEKYNAKFPVVADKEKKIIETYGVLNEKGTSAQRVTFIIDP
CCCEEEEECCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHCCCCCCCCCEEEEEEECC
EGKIIQILKNLKKAEEHADKALEIIKNKKS
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]