BacMap

Definition	Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession	NC_003106
Length	2,694,756

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The map label for this gene is wtpC [H]

Identifier: 15922354

GI number: 15922354

Start: 2048969

End: 2049580

Strand: Direct

Name: wtpC [H]

Synonym: ST2035

Alternate gene names: 15922354

Gene position: 2048969-2049580 (Clockwise)

Preceding gene: 15922349

Following gene: 15922358

Centisome position: 76.04

GC content: 28.43

Gene sequence:

>612_bases
ATGCTTGAGGCTGAAGTGGAAAAACGTTATTCTAGTTTTGTTCTCAGCATACAGTTTAAGGATAAAGGTATAATTTCGAT
TATAGGAAAAAATGGAAGTGGAAAGACTACATTTCTTAAAATTTTATCCGGAATAATACAACCAGATAAAGGATATGTAA
AACTTGACGGTAGAGATATTACTAATTTACCTATAAACAAAAGAAATATTATCCTAATAAACCAAGAAACATATATACCT
AATTTTAATGTTAAGAAACATCTCATTTGGGGGGCAAAGATTAGAAAAATAAAAGTTGATGAAAAAGAGATTATCGAAAT
TGCTAAGATGTTAGACGTACCAATTAATGAAAATAAAAAAGTAGGACAATTGAGTCTTGGTAATAAAGAAAAGGTTTCTC
TTGCAACTGCTATTATAGCTAGGCCTAGGGTTATATTGGTAGACGAAGGCTTTAGTAATATAAATAATAAGAGAAATTTC
ATAGAGAATTATATTAATTTAGCTAGAATGTATAGGATAGATATAATATATGTTACACAAGATATTGAAGACACTAAGTT
AGCTGAGAAAACCTATATGATGGAAAATGGAAGCTTAAAATTGATTCATTAG

Upstream 100 bases:

>100_bases
AAATATTCCTATATTTAAATATTTTCACCAGTCCCTATATTAGAAGATTATATTTATATAGTCAAAATTTTTAAAACTTT
TAGATAATTAATAGTAATTA

Downstream 100 bases:

>100_bases
TCACGTAACTTCTAAAACGTAAACGTTATTGACATTTGTAAATGTATATCCTGTTTTAATAACTCTTCCAACTTTTTCTA
AAGCTTCATAAGAGGAATGA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MLEAEVEKRYSSFVLSIQFKDKGIISIIGKNGSGKTTFLKILSGIIQPDKGYVKLDGRDITNLPINKRNIILINQETYIP
NFNVKKHLIWGAKIRKIKVDEKEIIEIAKMLDVPINENKKVGQLSLGNKEKVSLATAIIARPRVILVDEGFSNINNKRNF
IENYINLARMYRIDIIYVTQDIEDTKLAEKTYMMENGSLKLIH

Sequences:

>Translated_203_residues
MLEAEVEKRYSSFVLSIQFKDKGIISIIGKNGSGKTTFLKILSGIIQPDKGYVKLDGRDITNLPINKRNIILINQETYIP
NFNVKKHLIWGAKIRKIKVDEKEIIEIAKMLDVPINENKKVGQLSLGNKEKVSLATAIIARPRVILVDEGFSNINNKRNF
IENYINLARMYRIDIIYVTQDIEDTKLAEKTYMMENGSLKLIH
>Mature_203_residues
MLEAEVEKRYSSFVLSIQFKDKGIISIIGKNGSGKTTFLKILSGIIQPDKGYVKLDGRDITNLPINKRNIILINQETYIP
NFNVKKHLIWGAKIRKIKVDEKEIIEIAKMLDVPINENKKVGQLSLGNKEKVSLATAIIARPRVILVDEGFSNINNKRNF
IENYINLARMYRIDIIYVTQDIEDTKLAEKTYMMENGSLKLIH

Specific function: Part of the ABC transporter complex WtpABC involved in molybdate/tungstate import. Responsible for energy coupling to the transport system (Probable) [H]

COG id: COG3839

COG function: function code G; ABC-type sugar transport systems, ATPase components

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI148612844, Length=198, Percent_Identity=26.2626262626263, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI255708477, Length=198, Percent_Identity=26.2626262626263, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI42741659, Length=200, Percent_Identity=25, Blast_Score=71, Evalue=5e-13,
Organism=Homo sapiens, GI30795238, Length=206, Percent_Identity=28.1553398058252, Blast_Score=71, Evalue=6e-13,
Organism=Homo sapiens, GI27881501, Length=206, Percent_Identity=28.1553398058252, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI105990541, Length=146, Percent_Identity=31.5068493150685, Blast_Score=70, Evalue=9e-13,
Organism=Homo sapiens, GI9961252, Length=200, Percent_Identity=24.5, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI4505771, Length=200, Percent_Identity=24.5, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI31657092, Length=194, Percent_Identity=25.7731958762887, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI9961250, Length=174, Percent_Identity=25.2873563218391, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI153792144, Length=189, Percent_Identity=30.6878306878307, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI27436953, Length=191, Percent_Identity=28.7958115183246, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI21536378, Length=156, Percent_Identity=26.2820512820513, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI171184400, Length=165, Percent_Identity=27.8787878787879, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI45446740, Length=199, Percent_Identity=25.1256281407035, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI47078218, Length=199, Percent_Identity=25.1256281407035, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI42490749, Length=145, Percent_Identity=28.2758620689655, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI87081709, Length=187, Percent_Identity=30.4812834224599, Blast_Score=97, Evalue=6e-22,
Organism=Escherichia coli, GI1787370, Length=183, Percent_Identity=27.8688524590164, Blast_Score=91, Evalue=4e-20,
Organism=Escherichia coli, GI87082267, Length=191, Percent_Identity=27.2251308900524, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1788450, Length=195, Percent_Identity=27.6923076923077, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI87081791, Length=180, Percent_Identity=27.2222222222222, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI1787712, Length=194, Percent_Identity=25.7731958762887, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1788761, Length=206, Percent_Identity=23.7864077669903, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI1786253, Length=191, Percent_Identity=21.9895287958115, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1789032, Length=196, Percent_Identity=22.9591836734694, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1786563, Length=184, Percent_Identity=25.5434782608696, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1790467, Length=206, Percent_Identity=24.2718446601942, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI87081834, Length=187, Percent_Identity=25.668449197861, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1790525, Length=194, Percent_Identity=28.3505154639175, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1786698, Length=174, Percent_Identity=27.5862068965517, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1786981, Length=212, Percent_Identity=26.8867924528302, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1786398, Length=201, Percent_Identity=22.8855721393035, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI48995001, Length=189, Percent_Identity=23.2804232804233, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI48994943, Length=208, Percent_Identity=25, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=199, Percent_Identity=27.6381909547739, Blast_Score=70, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI193202349, Length=172, Percent_Identity=26.1627906976744, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17567265, Length=197, Percent_Identity=24.8730964467005, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17565586, Length=178, Percent_Identity=30.3370786516854, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17569145, Length=201, Percent_Identity=22.8855721393035, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115535101, Length=187, Percent_Identity=25.1336898395722, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI193211015, Length=186, Percent_Identity=23.1182795698925, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI193211017, Length=186, Percent_Identity=23.1182795698925, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI193208177, Length=192, Percent_Identity=23.4375, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI25146777, Length=185, Percent_Identity=25.4054054054054, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=189, Percent_Identity=23.8095238095238, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17533971, Length=157, Percent_Identity=24.203821656051, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17569143, Length=185, Percent_Identity=24.3243243243243, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17543740, Length=192, Percent_Identity=25.5208333333333, Blast_Score=64, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17567269, Length=187, Percent_Identity=25.1336898395722, Blast_Score=64, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71983516, Length=183, Percent_Identity=27.3224043715847, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71983510, Length=183, Percent_Identity=27.3224043715847, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71983523, Length=183, Percent_Identity=27.3224043715847, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17558664, Length=154, Percent_Identity=24.6753246753247, Blast_Score=63, Evalue=9e-11,
Organism=Drosophila melanogaster, GI281363262, Length=171, Percent_Identity=25.7309941520468, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24653245, Length=171, Percent_Identity=25.7309941520468, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221500365, Length=198, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI116007184, Length=198, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24648314, Length=183, Percent_Identity=28.9617486338798, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221512771, Length=146, Percent_Identity=30.1369863013699, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: 3.6.3.30 [C]

Molecular weight: Translated: 23235; Mature: 23235

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEAEVEKRYSSFVLSIQFKDKGIISIIGKNGSGKTTFLKILSGIIQPDKGYVKLDGRDI
CCCHHHHHHHCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCEE
TNLPINKRNIILINQETYIPNFNVKKHLIWGAKIRKIKVDEKEIIEIAKMLDVPINENKK
CCCCCCCCEEEEEECCEECCCCCCCEEEEECCEEEEEECCHHHHHHHHHHHCCCCCCCCC
VGQLSLGNKEKVSLATAIIARPRVILVDEGFSNINNKRNFIENYINLARMYRIDIIYVTQ
EEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHEEEEEEEEEEC
DIEDTKLAEKTYMMENGSLKLIH
CCCCHHHHHHHEEEECCCEEEEC
>Mature Secondary Structure
MLEAEVEKRYSSFVLSIQFKDKGIISIIGKNGSGKTTFLKILSGIIQPDKGYVKLDGRDI
CCCHHHHHHHCEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCEE
TNLPINKRNIILINQETYIPNFNVKKHLIWGAKIRKIKVDEKEIIEIAKMLDVPINENKK
CCCCCCCCEEEEEECCEECCCCCCCEEEEECCEEEEEECCHHHHHHHHHHHCCCCCCCCC
VGQLSLGNKEKVSLATAIIARPRVILVDEGFSNINNKRNFIENYINLARMYRIDIIYVTQ
EEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHEEEEEEEEEEC
DIEDTKLAEKTYMMENGSLKLIH
CCCCHHHHHHHEEEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]