| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15922353
Identifier: 15922353
GI number: 15922353
Start: 2047724
End: 2048854
Strand: Reverse
Name: 15922353
Synonym: ST2034
Alternate gene names: NA
Gene position: 2048854-2047724 (Counterclockwise)
Preceding gene: 15922355
Following gene: 15922352
Centisome position: 76.03
GC content: 35.72
Gene sequence:
>1131_bases ATGTCTAGGCACAAAGTGTATAAGGCAATCTCTTCTTATGTAATCATAGCAATAATTATAATAGCAATAGTAGCAGTTGT TGGTGTACTGTTGCTAACTCGTCATCCATCATCATCTTCAGTTACAAGTACTACCACACCAACAACATCATCTTCTGTTT CTCCATCATCAAGCGGTCCAGTTATTGTGTATGTTGCTGGTGCCTATAAGGCTATATTTGACTATTTAGCTAAGCAGTTT GAGCAACAAACTGGAATTACAGTAGACGTAGTACCAGGAGGGTCATTTGGATTAGCTGCTCAGATTGCAAAAGGACAACC TGTTAGTGTTTTTGTACCAGTAGCTTATATTCAAGCTGTTGAATTAGAAGGTAACAGAGACCCAGGCTGGGCTATAGCTT TTATCTCTGATCAAATGGCTATAATCTACAGTAACTATACCACTCAAAGTCCTTATTGGAATCAGTTATACTCAAACTAT ACGATGGCTATGAAAACTAATGAAAGTCAGTACTGGTATAACTTCTTCTATTTATTAACAACAAAGTTTAGTTTAGGTAT TTCAAACCCAAGTAGTGATCCAGAAGGTTTATATGCCTATTTAATTTTAAAGATGGCTGGTTATCTTTATGCTAATCATA GTTTTGATTACTTCATTAACTTAGTTAACCACAATCCAAATGTTGTATCAGCGCCTACTACGGCGGACTTTGTTCCAGAT CTAGCAACTGGTAAACTAGACTTTACGTTTTCTTATGTATCTTATGCGATCTCACAACATCTAGAATATTTAAAACTTCC TCCATGGTTAAGCTTTGGTTATTATCCTAATGAGACCAGCTGGGATAGCTTCTTCTTCTACAAAATAACAGTTAATGGTC AAACATTGAAGATATATGGAAATCCTGTTTATCTATACATAACTATTCCAGTAAATGCCTCAAATGAACAAGGAGCTATA GAGTTTGTCGAATTCATAGTTGATCACGTTCAAGAACTATCAATGTTTGGGGTAACACCAATAACTCACCCATTACTATT CTATCAAAACAAGAGCGACGTTCCATCACAAATTCTTAATCTGTTAAATCAAGGTGTATTACAGTATGGCGGGAACTTCA GTGCAGTTTAA
Upstream 100 bases:
>100_bases TATCTAAAAGTTTTAAAAATTTTGACTATATAAATATAATCTTCTAATATAGGGACTGGTGAAAATATTTAAATATAGGA ATATTTCTAATTAAATACAA
Downstream 100 bases:
>100_bases CCTTTTTAAGGCATTAGTATTTTTTCTAGCTTTTCTCCTCATTTTCCCAATTCTTGCAGTTCTTTATTACGGTTATGGTC CTTATTTTTCTATGAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MSRHKVYKAISSYVIIAIIIIAIVAVVGVLLLTRHPSSSSVTSTTTPTTSSSVSPSSSGPVIVYVAGAYKAIFDYLAKQF EQQTGITVDVVPGGSFGLAAQIAKGQPVSVFVPVAYIQAVELEGNRDPGWAIAFISDQMAIIYSNYTTQSPYWNQLYSNY TMAMKTNESQYWYNFFYLLTTKFSLGISNPSSDPEGLYAYLILKMAGYLYANHSFDYFINLVNHNPNVVSAPTTADFVPD LATGKLDFTFSYVSYAISQHLEYLKLPPWLSFGYYPNETSWDSFFFYKITVNGQTLKIYGNPVYLYITIPVNASNEQGAI EFVEFIVDHVQELSMFGVTPITHPLLFYQNKSDVPSQILNLLNQGVLQYGGNFSAV
Sequences:
>Translated_376_residues MSRHKVYKAISSYVIIAIIIIAIVAVVGVLLLTRHPSSSSVTSTTTPTTSSSVSPSSSGPVIVYVAGAYKAIFDYLAKQF EQQTGITVDVVPGGSFGLAAQIAKGQPVSVFVPVAYIQAVELEGNRDPGWAIAFISDQMAIIYSNYTTQSPYWNQLYSNY TMAMKTNESQYWYNFFYLLTTKFSLGISNPSSDPEGLYAYLILKMAGYLYANHSFDYFINLVNHNPNVVSAPTTADFVPD LATGKLDFTFSYVSYAISQHLEYLKLPPWLSFGYYPNETSWDSFFFYKITVNGQTLKIYGNPVYLYITIPVNASNEQGAI EFVEFIVDHVQELSMFGVTPITHPLLFYQNKSDVPSQILNLLNQGVLQYGGNFSAV >Mature_375_residues SRHKVYKAISSYVIIAIIIIAIVAVVGVLLLTRHPSSSSVTSTTTPTTSSSVSPSSSGPVIVYVAGAYKAIFDYLAKQFE QQTGITVDVVPGGSFGLAAQIAKGQPVSVFVPVAYIQAVELEGNRDPGWAIAFISDQMAIIYSNYTTQSPYWNQLYSNYT MAMKTNESQYWYNFFYLLTTKFSLGISNPSSDPEGLYAYLILKMAGYLYANHSFDYFINLVNHNPNVVSAPTTADFVPDL ATGKLDFTFSYVSYAISQHLEYLKLPPWLSFGYYPNETSWDSFFFYKITVNGQTLKIYGNPVYLYITIPVNASNEQGAIE FVEFIVDHVQELSMFGVTPITHPLLFYQNKSDVPSQILNLLNQGVLQYGGNFSAV
Specific function: Unknown
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family. WtpA subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2034_SULTO (Q96YZ5)
Other databases:
- EMBL: BA000023 - RefSeq: NP_378022.1 - ProteinModelPortal: Q96YZ5 - GeneID: 1460096 - GenomeReviews: BA000023_GR - KEGG: sto:ST2034 - NMPDR: fig|273063.1.peg.2190 - HOGENOM: HBG553362 - OMA: IYKSVAN - ProtClustDB: CLSK802968 - BioCyc: STOK273063:ST2034-MONOMER - InterPro: IPR006059
Pfam domain/function: PF01547 SBP_bac_1
EC number: NA
Molecular weight: Translated: 41750; Mature: 41619
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHKVYKAISSYVIIAIIIIAIVAVVGVLLLTRHPSSSSVTSTTTPTTSSSVSPSSSGP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCC VIVYVAGAYKAIFDYLAKQFEQQTGITVDVVPGGSFGLAAQIAKGQPVSVFVPVAYIQAV EEEEECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCCEEEEEEEEEEEE ELEGNRDPGWAIAFISDQMAIIYSNYTTQSPYWNQLYSNYTMAMKTNESQYWYNFFYLLT EECCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHCCEEEEEEECCCCEEEEEEEEEE TKFSLGISNPSSDPEGLYAYLILKMAGYLYANHSFDYFINLVNHNPNVVSAPTTADFVPD EEEEEECCCCCCCCHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCEEECCCCHHCCCC LATGKLDFTFSYVSYAISQHLEYLKLPPWLSFGYYPNETSWDSFFFYKITVNGQTLKIYG CCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEEC NPVYLYITIPVNASNEQGAIEFVEFIVDHVQELSMFGVTPITHPLLFYQNKSDVPSQILN CEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHH LLNQGVLQYGGNFSAV HHHHHHHHHCCCCCCC >Mature Secondary Structure SRHKVYKAISSYVIIAIIIIAIVAVVGVLLLTRHPSSSSVTSTTTPTTSSSVSPSSSGP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCC VIVYVAGAYKAIFDYLAKQFEQQTGITVDVVPGGSFGLAAQIAKGQPVSVFVPVAYIQAV EEEEECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCCEEEEEEEEEEEE ELEGNRDPGWAIAFISDQMAIIYSNYTTQSPYWNQLYSNYTMAMKTNESQYWYNFFYLLT EECCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHCCEEEEEEECCCCEEEEEEEEEE TKFSLGISNPSSDPEGLYAYLILKMAGYLYANHSFDYFINLVNHNPNVVSAPTTADFVPD EEEEEECCCCCCCCHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCEEECCCCHHCCCC LATGKLDFTFSYVSYAISQHLEYLKLPPWLSFGYYPNETSWDSFFFYKITVNGQTLKIYG CCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEEC NPVYLYITIPVNASNEQGAIEFVEFIVDHVQELSMFGVTPITHPLLFYQNKSDVPSQILN CEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHH LLNQGVLQYGGNFSAV HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11572479