| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15922299
Identifier: 15922299
GI number: 15922299
Start: 1995207
End: 1996475
Strand: Direct
Name: 15922299
Synonym: ST1983
Alternate gene names: NA
Gene position: 1995207-1996475 (Clockwise)
Preceding gene: 15922297
Following gene: 15922301
Centisome position: 74.04
GC content: 32.07
Gene sequence:
>1269_bases ATGGAGAAGTTTATTAAGGATCCAATACACGGGAATATAAAAATAGATGATTCCCTTATCGACAACATGTATTTTCAGAG ATTAAGACATGTCATACAGAACGGTATGGCTTATATGGTATTTCCGTCCATGAGACACTCAAGGTTTGAACACTCTCTCG GAACTTATTATATAGCATCAAAAATGGTGGAAAACGTTCAAGCCTCTGAAAAAGAGATAATTGATAAAAAAGAACTTATC AAAGAACTTGCCCTTTACCACGATATAGGTCATTTCCCTTTCTCTCATACTTTTGAATTCGCTATGGAAATCTTAGAATA TCTGAATAAAAACATTTACAATAGTATCATCAAGCTTACCGGGTTTAGAGACATGGAATATAAACTTCATGAGATGATGG GAATTAATATACTTAGGTCGATAAGAAAAACAGAACTGGCAGATCTGATGAGTAATGCATACTCATCTAAAGACATAAAA GAAATAAATGATCCTTTAGTGAAGATAGCTAAATTAATAGTAAACTCTGAACTAGACGCTGATAGGCTAGACTATCTGCA AAGGGATTCGTACTATTCTGGAGCTAAGTTTGGAATAATAGATCCAGAAAGGTTGTTAATCACGATGAAAATAACCACAG ATGGTTATGTATTTCCGCCTAAAGCAATTGATGATTTAGAGCACTTCTTTTTAGCAAGGTTTCACATGTATAGTTCTGTT TATAATCACCCCGTCATAGAGATTTATAATAGAATAATGGCGTATTTTATTGCTTTCGCGATAAACTCTTCGCTTCTTGA TATCCCTAGTAACTTAGAGGAATTTGCGGAATTTACAGATGAAAAAATATATTTAGCCCTCTTAAAAGTTAAAAATGATA ATAGGTTTTCACATTTTTACGAATCCCTAGTTAAAAGAAAAAAGTACATGAGAGCGGTAGTCGAAGGTGATCAAGCTAAA AATTTATTTAAGATAATATCATCAAATGAAAAAAGTAAGAGGAACCTCTATGATACTGTTCTTAATTATTACGGTAAGAT TGTAATAGGTAAATCAGAATTAACGACCGAGATAGGTAATATATTCATTGAGAGAAAAATGCTTAAAGAGAGTTATAATA ATCCATTATCTGAGGAAGGTGGGTTAACAAAAATTCCTGAAAGATACAGAATTTATGTTGGAGCTTATGATGAGGTTAGT AAAAATGATATTTTAAAATATTTTAATGATACCTTTGGTATACGATTAGCTTTCAAGGCTAATTCCTAG
Upstream 100 bases:
>100_bases ATGATGAATTATTACTAGAGAATAAAGGTAATGCTTAGCATTAGTTTTGAAGCATTCACTGAAAAATTTATATTTACCAT TTTTTCAATATAGGAAATTC
Downstream 100 bases:
>100_bases ATCATCAAGTAACTTTTTCTCTTCATTAGTGAACTCAACTTTCTTATTAGCATAGTAATTCCAGAGCTTCAAGCTTAAAG TCTTTATAATCTCGTGACTG
Product: interferon-gamma inducible protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MEKFIKDPIHGNIKIDDSLIDNMYFQRLRHVIQNGMAYMVFPSMRHSRFEHSLGTYYIASKMVENVQASEKEIIDKKELI KELALYHDIGHFPFSHTFEFAMEILEYLNKNIYNSIIKLTGFRDMEYKLHEMMGINILRSIRKTELADLMSNAYSSKDIK EINDPLVKIAKLIVNSELDADRLDYLQRDSYYSGAKFGIIDPERLLITMKITTDGYVFPPKAIDDLEHFFLARFHMYSSV YNHPVIEIYNRIMAYFIAFAINSSLLDIPSNLEEFAEFTDEKIYLALLKVKNDNRFSHFYESLVKRKKYMRAVVEGDQAK NLFKIISSNEKSKRNLYDTVLNYYGKIVIGKSELTTEIGNIFIERKMLKESYNNPLSEEGGLTKIPERYRIYVGAYDEVS KNDILKYFNDTFGIRLAFKANS
Sequences:
>Translated_422_residues MEKFIKDPIHGNIKIDDSLIDNMYFQRLRHVIQNGMAYMVFPSMRHSRFEHSLGTYYIASKMVENVQASEKEIIDKKELI KELALYHDIGHFPFSHTFEFAMEILEYLNKNIYNSIIKLTGFRDMEYKLHEMMGINILRSIRKTELADLMSNAYSSKDIK EINDPLVKIAKLIVNSELDADRLDYLQRDSYYSGAKFGIIDPERLLITMKITTDGYVFPPKAIDDLEHFFLARFHMYSSV YNHPVIEIYNRIMAYFIAFAINSSLLDIPSNLEEFAEFTDEKIYLALLKVKNDNRFSHFYESLVKRKKYMRAVVEGDQAK NLFKIISSNEKSKRNLYDTVLNYYGKIVIGKSELTTEIGNIFIERKMLKESYNNPLSEEGGLTKIPERYRIYVGAYDEVS KNDILKYFNDTFGIRLAFKANS >Mature_422_residues MEKFIKDPIHGNIKIDDSLIDNMYFQRLRHVIQNGMAYMVFPSMRHSRFEHSLGTYYIASKMVENVQASEKEIIDKKELI KELALYHDIGHFPFSHTFEFAMEILEYLNKNIYNSIIKLTGFRDMEYKLHEMMGINILRSIRKTELADLMSNAYSSKDIK EINDPLVKIAKLIVNSELDADRLDYLQRDSYYSGAKFGIIDPERLLITMKITTDGYVFPPKAIDDLEHFFLARFHMYSSV YNHPVIEIYNRIMAYFIAFAINSSLLDIPSNLEEFAEFTDEKIYLALLKVKNDNRFSHFYESLVKRKKYMRAVVEGDQAK NLFKIISSNEKSKRNLYDTVLNYYGKIVIGKSELTTEIGNIFIERKMLKESYNNPLSEEGGLTKIPERYRIYVGAYDEVS KNDILKYFNDTFGIRLAFKANS
Specific function: Unknown
COG id: COG1078
COG function: function code R; HD superfamily phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
Organism=Homo sapiens, GI38016914, Length=103, Percent_Identity=45.6310679611651, Blast_Score=87, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17537827, Length=293, Percent_Identity=31.3993174061433, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17537829, Length=293, Percent_Identity=31.3993174061433, Blast_Score=102, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003607 - InterPro: IPR006675 - InterPro: IPR011991 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49459; Mature: 49459
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKFIKDPIHGNIKIDDSLIDNMYFQRLRHVIQNGMAYMVFPSMRHSRFEHSLGTYYIAS CCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHH KMVENVQASEKEIIDKKELIKELALYHDIGHFPFSHTFEFAMEILEYLNKNIYNSIIKLT HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GFRDMEYKLHEMMGINILRSIRKTELADLMSNAYSSKDIKEINDPLVKIAKLIVNSELDA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCH DRLDYLQRDSYYSGAKFGIIDPERLLITMKITTDGYVFPPKAIDDLEHFFLARFHMYSSV HHHHHHHHCCCCCCCEECCCCCCCEEEEEEEECCCEECCCHHHHHHHHHHHHHHHHHHHH YNHPVIEIYNRIMAYFIAFAINSSLLDIPSNLEEFAEFTDEKIYLALLKVKNDNRFSHFY HCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHCCCEEEEEEEEECCCCHHHHHH ESLVKRKKYMRAVVEGDQAKNLFKIISSNEKSKRNLYDTVLNYYGKIVIGKSELTTEIGN HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHH IFIERKMLKESYNNPLSEEGGLTKIPERYRIYVGAYDEVSKNDILKYFNDTFGIRLAFKA HHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEEEECCCCCCHHHHHHHHCCCCCEEEEEEC NS CC >Mature Secondary Structure MEKFIKDPIHGNIKIDDSLIDNMYFQRLRHVIQNGMAYMVFPSMRHSRFEHSLGTYYIAS CCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHH KMVENVQASEKEIIDKKELIKELALYHDIGHFPFSHTFEFAMEILEYLNKNIYNSIIKLT HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GFRDMEYKLHEMMGINILRSIRKTELADLMSNAYSSKDIKEINDPLVKIAKLIVNSELDA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCH DRLDYLQRDSYYSGAKFGIIDPERLLITMKITTDGYVFPPKAIDDLEHFFLARFHMYSSV HHHHHHHHCCCCCCCEECCCCCCCEEEEEEEECCCEECCCHHHHHHHHHHHHHHHHHHHH YNHPVIEIYNRIMAYFIAFAINSSLLDIPSNLEEFAEFTDEKIYLALLKVKNDNRFSHFY HCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHCCCEEEEEEEEECCCCHHHHHH ESLVKRKKYMRAVVEGDQAKNLFKIISSNEKSKRNLYDTVLNYYGKIVIGKSELTTEIGN HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHH IFIERKMLKESYNNPLSEEGGLTKIPERYRIYVGAYDEVSKNDILKYFNDTFGIRLAFKA HHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEEEECCCCCCHHHHHHHHCCCCCEEEEEEC NS CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]