| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15922284
Identifier: 15922284
GI number: 15922284
Start: 1977921
End: 1978655
Strand: Reverse
Name: 15922284
Synonym: ST1967
Alternate gene names: NA
Gene position: 1978655-1977921 (Counterclockwise)
Preceding gene: 15922285
Following gene: 15922283
Centisome position: 73.43
GC content: 36.46
Gene sequence:
>735_bases ATGGAGTTTATTCCTCCTAAAAGAATGCTAGAACTTATTAAACACTACAGCACGACTTTCAAGAACTGGTATTCAGTAAT GCTTGGTATTTATCTTCATAGAGAGAGAATAAAGTGTACTTTAAGAAATGGACAGACTTTATATCTTACACCTAATGAAG CAGTTCTATTAGCGGGGCTAAGAATAATAGAGCTCGACTGCAATACGGTGAAATTCTCGTTTAACGGTAGAGAAATTACA TTAAGAGGATGGAGATTAAGTGACCCTGGGGACTCTTTCTCTGACTACTGGAGAATAAACGTCAAGGGAAAAAGAGTTCT GGACATAGGGGCTGGAGTAGGAGATTCTTCTATCTATTTTTCAACCATGGGTGCTAAAGAAGTTGTTGCTGTTGAAATAG ATAAAAAGAAAATCGAGCTAATGAGGGAGAACTTAAGGACAAACGGAATTAACAACGTTATCGTAGTAGATAAGGGAGTT GGCACTGTTGATAACGAAAATTTCATCAGCTGGGAAAGATTAATAAAAGATTATGGTCCTTTTGATGATGCTAAGATAGA CTGTGATGGCTGCGAGAGACTTATTTCTCCCTTTATAAAGGAGATACCAGAACTACTCATAGAATGGGATAGTGACTATA AGGACGTTGTAAAAAATTTATCTAAAAACGGTTATAAGATAAGGGTAGAGCATACGTTAAAGAACCTAGGATTTATATAT GCTAAGAGGGAATGA
Upstream 100 bases:
>100_bases ATATTTAATTAAGACTTAATGTGTTATTCTTTGAACTTGCTAAATACCTGTAACAGAAACGTCCTCAATATTTATAAGAG CTCATGAGGAATTAACAAAG
Downstream 100 bases:
>100_bases TCTTTGAAGGTCTTTTTCCTCGCAAGTCATCTTAAGGAAAGAGATGGAGCTAGTAGGGCAATATTAAACTTCGCAAGAGG GATAAGAGAGTTAAGTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MEFIPPKRMLELIKHYSTTFKNWYSVMLGIYLHRERIKCTLRNGQTLYLTPNEAVLLAGLRIIELDCNTVKFSFNGREIT LRGWRLSDPGDSFSDYWRINVKGKRVLDIGAGVGDSSIYFSTMGAKEVVAVEIDKKKIELMRENLRTNGINNVIVVDKGV GTVDNENFISWERLIKDYGPFDDAKIDCDGCERLISPFIKEIPELLIEWDSDYKDVVKNLSKNGYKIRVEHTLKNLGFIY AKRE
Sequences:
>Translated_244_residues MEFIPPKRMLELIKHYSTTFKNWYSVMLGIYLHRERIKCTLRNGQTLYLTPNEAVLLAGLRIIELDCNTVKFSFNGREIT LRGWRLSDPGDSFSDYWRINVKGKRVLDIGAGVGDSSIYFSTMGAKEVVAVEIDKKKIELMRENLRTNGINNVIVVDKGV GTVDNENFISWERLIKDYGPFDDAKIDCDGCERLISPFIKEIPELLIEWDSDYKDVVKNLSKNGYKIRVEHTLKNLGFIY AKRE >Mature_244_residues MEFIPPKRMLELIKHYSTTFKNWYSVMLGIYLHRERIKCTLRNGQTLYLTPNEAVLLAGLRIIELDCNTVKFSFNGREIT LRGWRLSDPGDSFSDYWRINVKGKRVLDIGAGVGDSSIYFSTMGAKEVVAVEIDKKKIELMRENLRTNGINNVIVVDKGV GTVDNENFISWERLIKDYGPFDDAKIDCDGCERLISPFIKEIPELLIEWDSDYKDVVKNLSKNGYKIRVEHTLKNLGFIY AKRE
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28183; Mature: 28183
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFIPPKRMLELIKHYSTTFKNWYSVMLGIYLHRERIKCTLRNGQTLYLTPNEAVLLAGL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEECCCCEEEEECE RIIELDCNTVKFSFNGREITLRGWRLSDPGDSFSDYWRINVKGKRVLDIGAGVGDSSIYF EEEEEECCEEEEEECCCEEEEEEEEECCCCCCCCCEEEEEECCCEEEEEECCCCCCCEEE STMGAKEVVAVEIDKKKIELMRENLRTNGINNVIVVDKGVGTVDNENFISWERLIKDYGP EECCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCC FDDAKIDCDGCERLISPFIKEIPELLIEWDSDYKDVVKNLSKNGYKIRVEHTLKNLGFIY CCCCEECHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCCEEEEEEEHHHCEEEE AKRE EECC >Mature Secondary Structure MEFIPPKRMLELIKHYSTTFKNWYSVMLGIYLHRERIKCTLRNGQTLYLTPNEAVLLAGL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEECCCCEEEEECE RIIELDCNTVKFSFNGREITLRGWRLSDPGDSFSDYWRINVKGKRVLDIGAGVGDSSIYF EEEEEECCEEEEEECCCEEEEEEEEECCCCCCCCCEEEEEECCCEEEEEECCCCCCCEEE STMGAKEVVAVEIDKKKIELMRENLRTNGINNVIVVDKGVGTVDNENFISWERLIKDYGP EECCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCC FDDAKIDCDGCERLISPFIKEIPELLIEWDSDYKDVVKNLSKNGYKIRVEHTLKNLGFIY CCCCEECHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCCEEEEEEEHHHCEEEE AKRE EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA