| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15922277
Identifier: 15922277
GI number: 15922277
Start: 1968451
End: 1969365
Strand: Reverse
Name: 15922277
Synonym: ST1960
Alternate gene names: NA
Gene position: 1969365-1968451 (Counterclockwise)
Preceding gene: 15922281
Following gene: 15922275
Centisome position: 73.08
GC content: 28.74
Gene sequence:
>915_bases ATGCTTATAACAATAGTTACTTACAACCCAGATGAGGAATTTGTTACTGAAATGGTTTCTAAAATTAAAGAGAAAAGCAA AGATTATAAAATACTTATCATAGATAATCATTCAAGAAAACCCTTAGAAAAATTAAAATCTACAGATTATTTTATTCAAT TTGATAAAAATTATGGATTAGGTAAAGCATATAATTATGCCGCTAAGTTCGCTAAGGAAATAGGAGAAGAGTATCTAATG TTTCTAGATCAAGACACAGTAATATTAGATAATTTTAATCCAAATAAAGTTGTGAAGGAAGCGGAAGAACTAAAGGCTAA GGGTATTGATCCACAAATATTAAGCATTAACATTGATAATACGGCCATAGAGAAGAAGATATCTGACTCTAATTTTTACA ATGCTAAGATAATCGTAAATAGCGGTATGATAGTACGTATAGACTATATAGGAAAAAATCCCTTTTTAGAAAATCTATTT TTAGATAGATTAGATCTTGAATATACTTATAGAGCAAGGAGACAAGGCGTATTACCATTAGTATATAAAGAGAGAATGAT ATTACATAAGCCCGGAGAAGGACTAAGACAATTCTCTAGATTTTGTGGGAAGTTGTTTTTAACTGCATTATATACGTTGT ATACTTTACGTCATAAAAATAATAAAAATAAAAAATTTGAGTACTACTCTTACTACTCAAGTTTCTTGCGATATTATCTC ATGTTACGTAATGATGTATACTTATGGATAAGAAGAAGAATATATCCTAATTTTTGGAAAATAATAATAGGAGATCTATT TGTGTTATGTGAGGTTCTAGGTTATAGTAAGGGGTTTAAGTGGGCTTTGAGAGCTATTAGATACGGAATTATAGGAGACC TTGATAAGGATAATAAAGAACTATTTCAAATTTGA
Upstream 100 bases:
>100_bases ATAAGGTCTGTACTGGTATGCTGTTACTATAACTGAAATAAATGGATCCATATTCTCTTACCTTAATTTTATTAAGATAA TTGGTAATATTTAATAATAG
Downstream 100 bases:
>100_bases CTTAGAGTTCAGCTATATTATTCTTGCTAAGACAAATAGACTGTCATTAATCTATAAACCCTCTACTTTAGGGCCTTCTC ATATTTAAGATTGATTAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MLITIVTYNPDEEFVTEMVSKIKEKSKDYKILIIDNHSRKPLEKLKSTDYFIQFDKNYGLGKAYNYAAKFAKEIGEEYLM FLDQDTVILDNFNPNKVVKEAEELKAKGIDPQILSINIDNTAIEKKISDSNFYNAKIIVNSGMIVRIDYIGKNPFLENLF LDRLDLEYTYRARRQGVLPLVYKERMILHKPGEGLRQFSRFCGKLFLTALYTLYTLRHKNNKNKKFEYYSYYSSFLRYYL MLRNDVYLWIRRRIYPNFWKIIIGDLFVLCEVLGYSKGFKWALRAIRYGIIGDLDKDNKELFQI
Sequences:
>Translated_304_residues MLITIVTYNPDEEFVTEMVSKIKEKSKDYKILIIDNHSRKPLEKLKSTDYFIQFDKNYGLGKAYNYAAKFAKEIGEEYLM FLDQDTVILDNFNPNKVVKEAEELKAKGIDPQILSINIDNTAIEKKISDSNFYNAKIIVNSGMIVRIDYIGKNPFLENLF LDRLDLEYTYRARRQGVLPLVYKERMILHKPGEGLRQFSRFCGKLFLTALYTLYTLRHKNNKNKKFEYYSYYSSFLRYYL MLRNDVYLWIRRRIYPNFWKIIIGDLFVLCEVLGYSKGFKWALRAIRYGIIGDLDKDNKELFQI >Mature_304_residues MLITIVTYNPDEEFVTEMVSKIKEKSKDYKILIIDNHSRKPLEKLKSTDYFIQFDKNYGLGKAYNYAAKFAKEIGEEYLM FLDQDTVILDNFNPNKVVKEAEELKAKGIDPQILSINIDNTAIEKKISDSNFYNAKIIVNSGMIVRIDYIGKNPFLENLF LDRLDLEYTYRARRQGVLPLVYKERMILHKPGEGLRQFSRFCGKLFLTALYTLYTLRHKNNKNKKFEYYSYYSSFLRYYL MLRNDVYLWIRRRIYPNFWKIIIGDLFVLCEVLGYSKGFKWALRAIRYGIIGDLDKDNKELFQI
Specific function: Unknown
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36155; Mature: 36155
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLITIVTYNPDEEFVTEMVSKIKEKSKDYKILIIDNHSRKPLEKLKSTDYFIQFDKNYGL CEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHCCCCEEEEECCCCCC GKAYNYAAKFAKEIGEEYLMFLDQDTVILDNFNPNKVVKEAEELKAKGIDPQILSINIDN CHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCC TAIEKKISDSNFYNAKIIVNSGMIVRIDYIGKNPFLENLFLDRLDLEYTYRARRQGVLPL HHHHHHCCCCCCEEEEEEEECCEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHCCCCCH VYKERMILHKPGEGLRQFSRFCGKLFLTALYTLYTLRHKNNKNKKFEYYSYYSSFLRYYL HHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH MLRNDVYLWIRRRIYPNFWKIIIGDLFVLCEVLGYSKGFKWALRAIRYGIIGDLDKDNKE HHHCCHHEEHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHH LFQI HHCC >Mature Secondary Structure MLITIVTYNPDEEFVTEMVSKIKEKSKDYKILIIDNHSRKPLEKLKSTDYFIQFDKNYGL CEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHCCCCEEEEECCCCCC GKAYNYAAKFAKEIGEEYLMFLDQDTVILDNFNPNKVVKEAEELKAKGIDPQILSINIDN CHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCC TAIEKKISDSNFYNAKIIVNSGMIVRIDYIGKNPFLENLFLDRLDLEYTYRARRQGVLPL HHHHHHCCCCCCEEEEEEEECCEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHCCCCCH VYKERMILHKPGEGLRQFSRFCGKLFLTALYTLYTLRHKNNKNKKFEYYSYYSSFLRYYL HHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH MLRNDVYLWIRRRIYPNFWKIIIGDLFVLCEVLGYSKGFKWALRAIRYGIIGDLDKDNKE HHHCCHHEEHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHH LFQI HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA