| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is insA1 [C]
Identifier: 15922222
GI number: 15922222
Start: 1909764
End: 1910498
Strand: Direct
Name: insA1 [C]
Synonym: ST1907
Alternate gene names: 15922222
Gene position: 1909764-1910498 (Clockwise)
Preceding gene: 15922221
Following gene: 15922223
Centisome position: 70.87
GC content: 44.49
Gene sequence:
>735_bases ATGGGTAGGAAGCCTGTAATTAGGCATGATATAGCGTGTCCCTCTTGTGGTAGTCATCACGTCGTTAAGTGTGGTAAGCC TCCTGGTAGGCAGAGGTTTCTGTGTAGGGATTGCGGTAAGTACTTTCTTGCAGACGCAGTTTATCACCACCACTCTAAGG AGGTGAGGGAGGAGGCTTTGAGGATGTATACTAATGGTATGAGTATGAGAGCTATTTCTAGGGTTCTTAACGTACCTCTG GGTACTGTTTTCACTTGGGTTAAGCGTTATGGTAAGAGGAAGTACGAGAAGCTGGTGGACTTGTGGAATAAGGCTAAAGA GTTGGTCAAGGGTAAGGTCGTTACTAAGGTTGTTGATGAGATGTGGACGTACTTGTACAGAAACACTAGGGCTTTCTACA AGTGGGTATTCACTTGTTACGTGTATACTAGGCTAGGGTTATACATAATTTACTCTGTGGGTGATAGGGATGAGAATACT TTTCGTGAGGTCAAGGACTACGTGCCAGATGATGGTAGGTGGGTGAGTGATGATTACAACGTTTACTTTTGGTTAAAGGA TCACACGGTAGTCTCACTTGTTAATCCCAACGAGTCCTTTCACTCCTCACTGAGGGATAGGCTCGTACGTTTCAAGAGGG CAACGAAGGCTGTTAACAGGAGTATAAATATGGTGAAGTATTCTATAGCGCTGGTCTTGTGGGAGAGAAGGCTAATCCCA GAATTTGTAGCTTAA
Upstream 100 bases:
>100_bases GAATGCTGTAAACCTTCTAGTTAAGAATACTGCAGCAAAGAATGAGTGTGGAGATAGTGCCGTCATTAAGCTATTTATAT TTGTATTATGAGTATCACTT
Downstream 100 bases:
>100_bases TGACGACACTATCTTATATAAAACATATTAGTCAGATCTGTGTAATACAGATCTGACTGGGTGAGGCCGTGACACTATTT GGGCTTAAAGCTCGGTGTGG
Product: insertion element protein
Products: NA
Alternate protein names: IS1 Transposase; Second ORF In Transposon ISC; Transposase ISC
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MGRKPVIRHDIACPSCGSHHVVKCGKPPGRQRFLCRDCGKYFLADAVYHHHSKEVREEALRMYTNGMSMRAISRVLNVPL GTVFTWVKRYGKRKYEKLVDLWNKAKELVKGKVVTKVVDEMWTYLYRNTRAFYKWVFTCYVYTRLGLYIIYSVGDRDENT FREVKDYVPDDGRWVSDDYNVYFWLKDHTVVSLVNPNESFHSSLRDRLVRFKRATKAVNRSINMVKYSIALVLWERRLIP EFVA
Sequences:
>Translated_244_residues MGRKPVIRHDIACPSCGSHHVVKCGKPPGRQRFLCRDCGKYFLADAVYHHHSKEVREEALRMYTNGMSMRAISRVLNVPL GTVFTWVKRYGKRKYEKLVDLWNKAKELVKGKVVTKVVDEMWTYLYRNTRAFYKWVFTCYVYTRLGLYIIYSVGDRDENT FREVKDYVPDDGRWVSDDYNVYFWLKDHTVVSLVNPNESFHSSLRDRLVRFKRATKAVNRSINMVKYSIALVLWERRLIP EFVA >Mature_243_residues GRKPVIRHDIACPSCGSHHVVKCGKPPGRQRFLCRDCGKYFLADAVYHHHSKEVREEALRMYTNGMSMRAISRVLNVPLG TVFTWVKRYGKRKYEKLVDLWNKAKELVKGKVVTKVVDEMWTYLYRNTRAFYKWVFTCYVYTRLGLYIIYSVGDRDENTF REVKDYVPDDGRWVSDDYNVYFWLKDHTVVSLVNPNESFHSSLRDRLVRFKRATKAVNRSINMVKYSIALVLWERRLIPE FVA
Specific function: Absolutely required for transposition of is1 [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28924; Mature: 28793
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRKPVIRHDIACPSCGSHHVVKCGKPPGRQRFLCRDCGKYFLADAVYHHHSKEVREEAL CCCCCCCHHCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMYTNGMSMRAISRVLNVPLGTVFTWVKRYGKRKYEKLVDLWNKAKELVKGKVVTKVVDE HHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MWTYLYRNTRAFYKWVFTCYVYTRLGLYIIYSVGDRDENTFREVKDYVPDDGRWVSDDYN HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHCCCCCCEEECCCCE VYFWLKDHTVVSLVNPNESFHSSLRDRLVRFKRATKAVNRSINMVKYSIALVLWERRLIP EEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFVA HHCC >Mature Secondary Structure GRKPVIRHDIACPSCGSHHVVKCGKPPGRQRFLCRDCGKYFLADAVYHHHSKEVREEAL CCCCCCHHCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMYTNGMSMRAISRVLNVPLGTVFTWVKRYGKRKYEKLVDLWNKAKELVKGKVVTKVVDE HHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MWTYLYRNTRAFYKWVFTCYVYTRLGLYIIYSVGDRDENTFREVKDYVPDDGRWVSDDYN HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHCCCCCCEEECCCCE VYFWLKDHTVVSLVNPNESFHSSLRDRLVRFKRATKAVNRSINMVKYSIALVLWERRLIP EEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFVA HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA