| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15922200
Identifier: 15922200
GI number: 15922200
Start: 1894926
End: 1895984
Strand: Reverse
Name: 15922200
Synonym: ST1886
Alternate gene names: NA
Gene position: 1895984-1894926 (Counterclockwise)
Preceding gene: 15922201
Following gene: 15922199
Centisome position: 70.36
GC content: 36.26
Gene sequence:
>1059_bases ATGTTAAGAATGGTAAGTAGTCCAGATTGGGTAAGGTTAAGTTTCGGAGCGGATATGGTATTAGGTTTTAGTCCAGGTGT TTTTTTACATAATGCGCTAAATACAACAATAAACTTATTACAGTACTATCCAGATGGATGTAAAGCCAATTGTTCTTATT GTGGACAAGCTAGAGAAGTAGCTCAAGGTCCTGAGTGTAAGACGTTAATAAGAGTAGAATGGCCATTACGCAGATTAGAT GATGTAATAAAGAAAATTAAGGAGAGACAAGGAGATCCAAGATATGGTTTACAAAGAATATGTGTAGGTCAATTAGCCCA TCCTAAGGCTGCGCAAGATTCTATAGAAATCACTAGAAGAATAAGAGAGGCAGGAATTGAGTTATCTATCTCAGAATTAA TAACACCAACGTATACATTTAAACATCATTTAATAGAGATGAGAAAAGCCGGAGGAGATATGGTAGATGTTGCCATAGAT GCAGCTAGTAAAAGAGTGTTTGAAGAAACTAGGGGTAAAAAAGTTAGGAGTATGCATAGTTGGGAAAGATATCTACAAGG TATTGATGAGGCAGTCGAAGTATTTGGAAAAGGAAATGCTGGAATACATCTTATTATTGGTTTAGGAGAAACTGAAAAAG AAGCTGTAGACATTATGTGGTATGCTCATTCAAGGGGTGCAAAAATTACATTATTTGCATTTTATCCAGAACAAGGAACT CCTATGGAGAAAGTAAAACCAGCCCCCGTTAACGTTTATAGGAGAATGCAAATAGCAAGATGGTTAATAGAAAATGATTT GGTGGATTATTCAGCATTTAAATTCGATGAAAAAGGCATCTTATTAGATGTTGATATTCCATCTGACTTATCAATTGATG AGTTAGCCCCGGCATTTATGACCTCTGGTTGCCCCGGCTGTAATAGACCCTACTCTAATGAGAGACCTAACATGGAATTT AGGAACATACCATGGTATCCTTCAAGAGAAAAAACATTACAAGCTATAAAGCAAAGTAGACTTCCTACGTTAATAAAACG CTTCGAGCAAAAGCAATGA
Upstream 100 bases:
>100_bases AGAAGAAGAGGTTATTCCATATGCAAGAAATAAAAGGGAAATTATTTTTAGTAATGCATGTTGTGGAAATGTTATTTTTG ATGTTTTAGGGGTGATTTAA
Downstream 100 bases:
>100_bases AGATCTTAAAAGGTAGTCTTTTAAGTTTTTTCTCTAGTGGTTTTCCATCACACGTTAAGATAAAGGCTATTGATCTTAGT TCGCCAGACCAAGAGAATTT
Product: hypothetical protein
Products: biotin
Alternate protein names: Radical SAM Domain-Containing Protein; Biotin Synthase Related Protein; Biotin Synthase; Biotin Synthase-Related Protein; Radical SAM Superfamily Protein; Biotin Synthase-Related; Radical SAM Family Protein
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MLRMVSSPDWVRLSFGADMVLGFSPGVFLHNALNTTINLLQYYPDGCKANCSYCGQAREVAQGPECKTLIRVEWPLRRLD DVIKKIKERQGDPRYGLQRICVGQLAHPKAAQDSIEITRRIREAGIELSISELITPTYTFKHHLIEMRKAGGDMVDVAID AASKRVFEETRGKKVRSMHSWERYLQGIDEAVEVFGKGNAGIHLIIGLGETEKEAVDIMWYAHSRGAKITLFAFYPEQGT PMEKVKPAPVNVYRRMQIARWLIENDLVDYSAFKFDEKGILLDVDIPSDLSIDELAPAFMTSGCPGCNRPYSNERPNMEF RNIPWYPSREKTLQAIKQSRLPTLIKRFEQKQ
Sequences:
>Translated_352_residues MLRMVSSPDWVRLSFGADMVLGFSPGVFLHNALNTTINLLQYYPDGCKANCSYCGQAREVAQGPECKTLIRVEWPLRRLD DVIKKIKERQGDPRYGLQRICVGQLAHPKAAQDSIEITRRIREAGIELSISELITPTYTFKHHLIEMRKAGGDMVDVAID AASKRVFEETRGKKVRSMHSWERYLQGIDEAVEVFGKGNAGIHLIIGLGETEKEAVDIMWYAHSRGAKITLFAFYPEQGT PMEKVKPAPVNVYRRMQIARWLIENDLVDYSAFKFDEKGILLDVDIPSDLSIDELAPAFMTSGCPGCNRPYSNERPNMEF RNIPWYPSREKTLQAIKQSRLPTLIKRFEQKQ >Mature_352_residues MLRMVSSPDWVRLSFGADMVLGFSPGVFLHNALNTTINLLQYYPDGCKANCSYCGQAREVAQGPECKTLIRVEWPLRRLD DVIKKIKERQGDPRYGLQRICVGQLAHPKAAQDSIEITRRIREAGIELSISELITPTYTFKHHLIEMRKAGGDMVDVAID AASKRVFEETRGKKVRSMHSWERYLQGIDEAVEVFGKGNAGIHLIIGLGETEKEAVDIMWYAHSRGAKITLFAFYPEQGT PMEKVKPAPVNVYRRMQIARWLIENDLVDYSAFKFDEKGILLDVDIPSDLSIDELAPAFMTSGCPGCNRPYSNERPNMEF RNIPWYPSREKTLQAIKQSRLPTLIKRFEQKQ
Specific function: Unknown
COG id: COG2516
COG function: function code R; Biotin synthase-related enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.8.1.6
Molecular weight: Translated: 40127; Mature: 40127
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRMVSSPDWVRLSFGADMVLGFSPGVFLHNALNTTINLLQYYPDGCKANCSYCGQAREV CCCCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH AQGPECKTLIRVEWPLRRLDDVIKKIKERQGDPRYGLQRICVGQLAHPKAAQDSIEITRR HCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH IREAGIELSISELITPTYTFKHHLIEMRKAGGDMVDVAIDAASKRVFEETRGKKVRSMHS HHHCCCCEEHHHHCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCHHHHHHHH WERYLQGIDEAVEVFGKGNAGIHLIIGLGETEKEAVDIMWYAHSRGAKITLFAFYPEQGT HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCEEEEEEEECCCCC PMEKVKPAPVNVYRRMQIARWLIENDLVDYSAFKFDEKGILLDVDIPSDLSIDELAPAFM CHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHEEECCCCEEEEECCCCCCCHHHHHHHHH TSGCPGCNRPYSNERPNMEFRNIPWYPSREKTLQAIKQSRLPTLIKRFEQKQ HCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCC >Mature Secondary Structure MLRMVSSPDWVRLSFGADMVLGFSPGVFLHNALNTTINLLQYYPDGCKANCSYCGQAREV CCCCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH AQGPECKTLIRVEWPLRRLDDVIKKIKERQGDPRYGLQRICVGQLAHPKAAQDSIEITRR HCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH IREAGIELSISELITPTYTFKHHLIEMRKAGGDMVDVAIDAASKRVFEETRGKKVRSMHS HHHCCCCEEHHHHCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCHHHHHHHH WERYLQGIDEAVEVFGKGNAGIHLIIGLGETEKEAVDIMWYAHSRGAKITLFAFYPEQGT HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCEEEEEEEECCCCC PMEKVKPAPVNVYRRMQIARWLIENDLVDYSAFKFDEKGILLDVDIPSDLSIDELAPAFM CHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHEEECCCCEEEEECCCCCCCHHHHHHHHH TSGCPGCNRPYSNERPNMEFRNIPWYPSREKTLQAIKQSRLPTLIKRFEQKQ HCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: dethiobiotin; sulfur
Specific reaction: dethiobiotin + sulfur = biotin
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA