| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15922176
Identifier: 15922176
GI number: 15922176
Start: 1875064
End: 1875783
Strand: Reverse
Name: 15922176
Synonym: ST1863
Alternate gene names: NA
Gene position: 1875783-1875064 (Counterclockwise)
Preceding gene: 15922177
Following gene: 15922174
Centisome position: 69.61
GC content: 24.31
Gene sequence:
>720_bases ATGTCATTACCATGGAATGTTGTTAATGAGAAGAATATTTATTTTAGTCATCAAGAATTTATGTCAAAAATAAGTGTCAT TAAACCCTTATATGAAAATCCAGACCAAATAACAATTACTATACCTTCAATTCTGCCTTTAATAACCTTTAATATAATCT TCGTTATGTTCATTATCCTCTCATTTAAAATATTTTATTTAATCTCAATTTCTCTTTTACCTCTCTCATATTTATTAGGA TTAGAATTAAGTAAGAATGTAAGCTCTAAGACGTTGGTTATCTATATTGTTCTTTTTTCTATATTATTTATAAACACAAA AATTGGATTAGTAACTTTAATATCTATATTATTAATTTTTTATATTTATTTTACTCATAGGAAATCTAAATATGCCTTTG CTTTTAGTGCTACCGCGTCTAATCTAATTTATGAGTTTAGTGTTAAGGATTCATATATAAGCGTTTTAAAATCAGATCTT CGTTTATCTCCCTATAAAATGTATCTCGAGTTAATAAGTAATAATTCTGGTATACTTTTTCATGATTTTATAACAATATA TGCTATAAATAAAGGCAGGGTTGGTATAATTATTGAAGTAGAATATTATGTAAAAGATATGAGAAATAAAAAGTTCAAGG AGCTTTTAAATACTCATTTTGATCTTGTTAAAAGCTTCTTAATCTCTAAATTAAATGAGAAAGAATGGATTTTAGGTTAA
Upstream 100 bases:
>100_bases GTGGTTATTGTCCTATGATGTGGGCAATGGAGCAGGTAAGGAAAATTAGTGACTAGAATCGAAAATAATTTAATCACTTT CTCAACTTACTCTCTTAAAT
Downstream 100 bases:
>100_bases TATTTTTCTTAAGAAATAATATGATAAAATGAAAATAGATAAAAACATAATACAAAAATTCATTATAAAATTAGTGTTGA AGATAACATAATTACCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MSLPWNVVNEKNIYFSHQEFMSKISVIKPLYENPDQITITIPSILPLITFNIIFVMFIILSFKIFYLISISLLPLSYLLG LELSKNVSSKTLVIYIVLFSILFINTKIGLVTLISILLIFYIYFTHRKSKYAFAFSATASNLIYEFSVKDSYISVLKSDL RLSPYKMYLELISNNSGILFHDFITIYAINKGRVGIIIEVEYYVKDMRNKKFKELLNTHFDLVKSFLISKLNEKEWILG
Sequences:
>Translated_239_residues MSLPWNVVNEKNIYFSHQEFMSKISVIKPLYENPDQITITIPSILPLITFNIIFVMFIILSFKIFYLISISLLPLSYLLG LELSKNVSSKTLVIYIVLFSILFINTKIGLVTLISILLIFYIYFTHRKSKYAFAFSATASNLIYEFSVKDSYISVLKSDL RLSPYKMYLELISNNSGILFHDFITIYAINKGRVGIIIEVEYYVKDMRNKKFKELLNTHFDLVKSFLISKLNEKEWILG >Mature_238_residues SLPWNVVNEKNIYFSHQEFMSKISVIKPLYENPDQITITIPSILPLITFNIIFVMFIILSFKIFYLISISLLPLSYLLGL ELSKNVSSKTLVIYIVLFSILFINTKIGLVTLISILLIFYIYFTHRKSKYAFAFSATASNLIYEFSVKDSYISVLKSDLR LSPYKMYLELISNNSGILFHDFITIYAINKGRVGIIIEVEYYVKDMRNKKFKELLNTHFDLVKSFLISKLNEKEWILG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27841; Mature: 27709
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPWNVVNEKNIYFSHQEFMSKISVIKPLYENPDQITITIPSILPLITFNIIFVMFIIL CCCCCCCCCCCCEEECHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHH SFKIFYLISISLLPLSYLLGLELSKNVSSKTLVIYIVLFSILFINTKIGLVTLISILLIF HHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH YIYFTHRKSKYAFAFSATASNLIYEFSVKDSYISVLKSDLRLSPYKMYLELISNNSGILF HHHHHCCCCCEEEEEECCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEE HDFITIYAINKGRVGIIIEVEYYVKDMRNKKFKELLNTHFDLVKSFLISKLNEKEWILG EEEEEEEEECCCCEEEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SLPWNVVNEKNIYFSHQEFMSKISVIKPLYENPDQITITIPSILPLITFNIIFVMFIIL CCCCCCCCCCCEEECHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHH SFKIFYLISISLLPLSYLLGLELSKNVSSKTLVIYIVLFSILFINTKIGLVTLISILLIF HHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH YIYFTHRKSKYAFAFSATASNLIYEFSVKDSYISVLKSDLRLSPYKMYLELISNNSGILF HHHHHCCCCCEEEEEECCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEE HDFITIYAINKGRVGIIIEVEYYVKDMRNKKFKELLNTHFDLVKSFLISKLNEKEWILG EEEEEEEEECCCCEEEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA