Click here to switch to the map view.

The map label for this gene is yngJ [H]

Identifier: 15922116

GI number: 15922116

Start: 1819558

End: 1820682

Strand: Reverse

Name: yngJ [H]

Synonym: ST1802

Alternate gene names: 15922116

Gene position: 1820682-1819558 (Counterclockwise)

Preceding gene: 15922119

Following gene: 15922114

Centisome position: 67.56

GC content: 35.38

Gene sequence:

>1125_bases
ATGAGTGAACTAATTTTATCCTCCGTAAAAGAGTTTGTTAAAAGGGAAATTGAACCATTAGCAGAAAAAATTGATAGAGA
GGATTATTACCCAAGGGAGTTAGTTAAGAGAATGGGTGAGCTTGGTTATTTGTCACCGCTTTATGAGGGATTAACGTTAT
ATGACACTGTAAATATAATTGAAGAGATAGCAAAAGTTAGTGGTTCTGTGGCCTTAATACAAGATGCCCAAGGTGAACTA
GTAACAGAACCTATTAGAATGTTTGGGAATAAAGAACAGAAAGAGATCTTAGATAAGCTTGCAAAAGGTGAGTTAATTGG
TGGTTTTGGTTTAAGTGAGCCTTGCTGTGGTAGTGATGCCGGAAGTATAATTACCAAGGCAGAAAGAATTAAGGGTAGTT
GGATTATTAACGGTAGAAAAATGTGGACTACCCAAGGGCTTTATGCTGATATTTTCTTAATAGTAGCAAGGACTGGTGAT
CCAAAATTAAAGGAAAAAACACTTACTGTTTTTCTAGTCCCTAGAAATAAGTGTATTACTACAAGAAAAATTGAAGTAAT
GGGAAATAGAGGAACTGGAACCGCAGAAGTAGAGTTAAACGATTGTGAGGTTGGAGAAGAGAACATTGTTGGAGAGTTAA
ATGGTGGTTGGAGAGTTGTAAAATACGCTTTATTAGTTGGTAGGATTGCTATTTCGGCAATAGCCATAGGGTTAAGCATT
TGCGCAATTGAGGAGGCTATACAGTGGAGTAAACATAGGGAATTATTTGATTCTAAATTAATTGAAAAGCAAGGAATTCA
GTGGTATTTAGCTAAATCTGTGGCTAATCTTTACTCTATTAAGAGTATGATAAGAGAAATTTCAAAATATCCGTTAGATA
GGCTATTTGAAATTGAGGGAAAGATTTCAGCTCTGAAATTTGTTTCTTCGAACGTAGCTGAAAACATTATAGATACTGCA
TTACAAATTATGGGTGGTTTAGGATATGCTAAAGGGAGCAAAGTTGAAAGAGCGTTTAGAGATGTGAGATTAACCAGGAT
TGGAGAAGGGACTGACGAAGTCCAATTGTCAATTATTAATAAAGTTTTGATGAGGCATGGGATAGATAAAATACTCAATG
AATGA

Upstream 100 bases:

>100_bases
TTGTAAACTATAAAATTCCGCTTCCATACAATATTATCTCATACTTTATTTTTATGTTTTATGACAATGATTTATTATTT
TTCTTTGATAACTTATAATT

Downstream 100 bases:

>100_bases
GTAAGAGAAATCTTCTTTTTCCAGCATTTAGAATTTCTTAATTATTCCTTGATAAAATGAAATATATTTTGATTACATAG
GAGATTTCACTTAAGATAAT

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MSELILSSVKEFVKREIEPLAEKIDREDYYPRELVKRMGELGYLSPLYEGLTLYDTVNIIEEIAKVSGSVALIQDAQGEL
VTEPIRMFGNKEQKEILDKLAKGELIGGFGLSEPCCGSDAGSIITKAERIKGSWIINGRKMWTTQGLYADIFLIVARTGD
PKLKEKTLTVFLVPRNKCITTRKIEVMGNRGTGTAEVELNDCEVGEENIVGELNGGWRVVKYALLVGRIAISAIAIGLSI
CAIEEAIQWSKHRELFDSKLIEKQGIQWYLAKSVANLYSIKSMIREISKYPLDRLFEIEGKISALKFVSSNVAENIIDTA
LQIMGGLGYAKGSKVERAFRDVRLTRIGEGTDEVQLSIINKVLMRHGIDKILNE

Sequences:

>Translated_374_residues
MSELILSSVKEFVKREIEPLAEKIDREDYYPRELVKRMGELGYLSPLYEGLTLYDTVNIIEEIAKVSGSVALIQDAQGEL
VTEPIRMFGNKEQKEILDKLAKGELIGGFGLSEPCCGSDAGSIITKAERIKGSWIINGRKMWTTQGLYADIFLIVARTGD
PKLKEKTLTVFLVPRNKCITTRKIEVMGNRGTGTAEVELNDCEVGEENIVGELNGGWRVVKYALLVGRIAISAIAIGLSI
CAIEEAIQWSKHRELFDSKLIEKQGIQWYLAKSVANLYSIKSMIREISKYPLDRLFEIEGKISALKFVSSNVAENIIDTA
LQIMGGLGYAKGSKVERAFRDVRLTRIGEGTDEVQLSIINKVLMRHGIDKILNE
>Mature_373_residues
SELILSSVKEFVKREIEPLAEKIDREDYYPRELVKRMGELGYLSPLYEGLTLYDTVNIIEEIAKVSGSVALIQDAQGELV
TEPIRMFGNKEQKEILDKLAKGELIGGFGLSEPCCGSDAGSIITKAERIKGSWIINGRKMWTTQGLYADIFLIVARTGDP
KLKEKTLTVFLVPRNKCITTRKIEVMGNRGTGTAEVELNDCEVGEENIVGELNGGWRVVKYALLVGRIAISAIAIGLSIC
AIEEAIQWSKHRELFDSKLIEKQGIQWYLAKSVANLYSIKSMIREISKYPLDRLFEIEGKISALKFVSSNVAENIIDTAL
QIMGGLGYAKGSKVERAFRDVRLTRIGEGTDEVQLSIINKVLMRHGIDKILNE

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=377, Percent_Identity=32.6259946949602, Blast_Score=194, Evalue=8e-50,
Organism=Homo sapiens, GI4501859, Length=371, Percent_Identity=31.8059299191375, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI226958412, Length=368, Percent_Identity=29.8913043478261, Blast_Score=160, Evalue=1e-39,
Organism=Homo sapiens, GI21361497, Length=379, Percent_Identity=33.245382585752, Blast_Score=156, Evalue=3e-38,
Organism=Homo sapiens, GI4557231, Length=380, Percent_Identity=30.5263157894737, Blast_Score=147, Evalue=1e-35,
Organism=Homo sapiens, GI187960098, Length=380, Percent_Identity=30.5263157894737, Blast_Score=147, Evalue=1e-35,
Organism=Homo sapiens, GI226958414, Length=342, Percent_Identity=30.1169590643275, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI76496475, Length=336, Percent_Identity=35.1190476190476, Blast_Score=143, Evalue=2e-34,
Organism=Homo sapiens, GI4557235, Length=336, Percent_Identity=35.1190476190476, Blast_Score=143, Evalue=2e-34,
Organism=Homo sapiens, GI7656849, Length=364, Percent_Identity=26.3736263736264, Blast_Score=121, Evalue=8e-28,
Organism=Homo sapiens, GI4501857, Length=380, Percent_Identity=24.2105263157895, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI4503943, Length=375, Percent_Identity=26.6666666666667, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI7669494, Length=283, Percent_Identity=29.6819787985866, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI38505218, Length=391, Percent_Identity=25.8312020460358, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI211971008, Length=295, Percent_Identity=24.406779661017, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI48976061, Length=295, Percent_Identity=24.406779661017, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI87081958, Length=373, Percent_Identity=29.4906166219839, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1786223, Length=375, Percent_Identity=25.3333333333333, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI87082384, Length=306, Percent_Identity=24.8366013071895, Blast_Score=69, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17538396, Length=369, Percent_Identity=30.0813008130081, Blast_Score=162, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI17508101, Length=372, Percent_Identity=30.6451612903226, Blast_Score=161, Evalue=5e-40,
Organism=Caenorhabditis elegans, GI17569725, Length=375, Percent_Identity=29.8666666666667, Blast_Score=155, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17534899, Length=375, Percent_Identity=30.1333333333333, Blast_Score=153, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17570075, Length=369, Percent_Identity=28.4552845528455, Blast_Score=144, Evalue=9e-35,
Organism=Caenorhabditis elegans, GI17506239, Length=375, Percent_Identity=28, Blast_Score=139, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI17551932, Length=369, Percent_Identity=28.9972899728997, Blast_Score=133, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI71985184, Length=352, Percent_Identity=29.2613636363636, Blast_Score=131, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI17505929, Length=375, Percent_Identity=28.8, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71982178, Length=267, Percent_Identity=31.8352059925094, Blast_Score=127, Evalue=7e-30,
Organism=Caenorhabditis elegans, GI71990804, Length=225, Percent_Identity=32.4444444444444, Blast_Score=114, Evalue=8e-26,
Organism=Caenorhabditis elegans, GI17533517, Length=372, Percent_Identity=23.6559139784946, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI32563615, Length=218, Percent_Identity=32.1100917431193, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17534353, Length=373, Percent_Identity=25.7372654155496, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI71985192, Length=289, Percent_Identity=28.3737024221453, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17562446, Length=293, Percent_Identity=25.5972696245734, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21356377, Length=377, Percent_Identity=31.2997347480106, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI24646207, Length=372, Percent_Identity=31.7204301075269, Blast_Score=165, Evalue=4e-41,
Organism=Drosophila melanogaster, GI21355753, Length=364, Percent_Identity=30.4945054945055, Blast_Score=159, Evalue=3e-39,
Organism=Drosophila melanogaster, GI24666513, Length=376, Percent_Identity=29.5212765957447, Blast_Score=157, Evalue=9e-39,
Organism=Drosophila melanogaster, GI24660351, Length=364, Percent_Identity=30.4945054945055, Blast_Score=155, Evalue=6e-38,
Organism=Drosophila melanogaster, GI281363737, Length=282, Percent_Identity=35.1063829787234, Blast_Score=132, Evalue=5e-31,
Organism=Drosophila melanogaster, GI19920834, Length=371, Percent_Identity=24.7978436657682, Blast_Score=93, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41707; Mature: 41576

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELILSSVKEFVKREIEPLAEKIDREDYYPRELVKRMGELGYLSPLYEGLTLYDTVNII
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHH
EEIAKVSGSVALIQDAQGELVTEPIRMFGNKEQKEILDKLAKGELIGGFGLSEPCCGSDA
HHHHHHCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCC
GSIITKAERIKGSWIINGRKMWTTQGLYADIFLIVARTGDPKLKEKTLTVFLVPRNKCIT
HHHHHHHHHCCCCEEECCCEEEECCCHHEEEEEEEEECCCCCCCCCEEEEEEEECCCEEE
TRKIEVMGNRGTGTAEVELNDCEVGEENIVGELNGGWRVVKYALLVGRIAISAIAIGLSI
EEEEEEEECCCCCEEEEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
CAIEEAIQWSKHRELFDSKLIEKQGIQWYLAKSVANLYSIKSMIREISKYPLDRLFEIEG
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
KISALKFVSSNVAENIIDTALQIMGGLGYAKGSKVERAFRDVRLTRIGEGTDEVQLSIIN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
KVLMRHGIDKILNE
HHHHHHCHHHHHCC
>Mature Secondary Structure 
SELILSSVKEFVKREIEPLAEKIDREDYYPRELVKRMGELGYLSPLYEGLTLYDTVNII
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHH
EEIAKVSGSVALIQDAQGELVTEPIRMFGNKEQKEILDKLAKGELIGGFGLSEPCCGSDA
HHHHHHCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCC
GSIITKAERIKGSWIINGRKMWTTQGLYADIFLIVARTGDPKLKEKTLTVFLVPRNKCIT
HHHHHHHHHCCCCEEECCCEEEECCCHHEEEEEEEEECCCCCCCCCEEEEEEEECCCEEE
TRKIEVMGNRGTGTAEVELNDCEVGEENIVGELNGGWRVVKYALLVGRIAISAIAIGLSI
EEEEEEEECCCCCEEEEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
CAIEEAIQWSKHRELFDSKLIEKQGIQWYLAKSVANLYSIKSMIREISKYPLDRLFEIEG
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
KISALKFVSSNVAENIIDTALQIMGGLGYAKGSKVERAFRDVRLTRIGEGTDEVQLSIIN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
KVLMRHGIDKILNE
HHHHHHCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]