| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15922111
Identifier: 15922111
GI number: 15922111
Start: 1815287
End: 1815715
Strand: Reverse
Name: 15922111
Synonym: ST1797
Alternate gene names: NA
Gene position: 1815715-1815287 (Counterclockwise)
Preceding gene: 15922112
Following gene: 15922110
Centisome position: 67.38
GC content: 34.5
Gene sequence:
>429_bases ATGAGTTGGGATAAGATTGGTATTGAAGATAAATTATTATCATGGCACGAAATAATGGAAGCTGAAGAATATGTTTATAC TGTAGGTGTTGCTGGTGAAGAATTCTTTAACGGACTAAAGCAAAGGAAAATTATAGGAGGAAAATGCCCTAAATGCGGAA GAATATACGTTCCAGCAAGGCTCTACTGTGAGGAATGCTTCGTTAAAAATGATTTTGTTGAGGTTACTACAAAACCATAT ATAGATACTTATACGGTTGTTTATAAAGACGATGAAGGAAACAAACTGGAAAAGCCTCAAGTAATAGCGTTAATACGATT TGAAGGTACGCATGGTGGTTTACTAGCTTACATTGAAGGTGAGGCAGATATTGGAAAAGAAGTTGAAATACTTGAATACA AAATACCATTAATAGTGAGGGTTAAATGA
Upstream 100 bases:
>100_bases ATGTGAAAAATATGAGTTTATTTGGTAAGAAAGTTAAGGCAGTATGGAGAGAAGAAAGAGTTGGAAGTATAAACGATATT GAATGTTTTAAGGTGATAGA
Downstream 100 bases:
>100_bases GTTGGTTACCTACAAAGGATTGGATTGAGGAAAGTAATGTTTATTCTTTTATGTTAGAAAACGATATTTCTAAGTTATCA CATTTTATTTCTTATACTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSWDKIGIEDKLLSWHEIMEAEEYVYTVGVAGEEFFNGLKQRKIIGGKCPKCGRIYVPARLYCEECFVKNDFVEVTTKPY IDTYTVVYKDDEGNKLEKPQVIALIRFEGTHGGLLAYIEGEADIGKEVEILEYKIPLIVRVK
Sequences:
>Translated_142_residues MSWDKIGIEDKLLSWHEIMEAEEYVYTVGVAGEEFFNGLKQRKIIGGKCPKCGRIYVPARLYCEECFVKNDFVEVTTKPY IDTYTVVYKDDEGNKLEKPQVIALIRFEGTHGGLLAYIEGEADIGKEVEILEYKIPLIVRVK >Mature_141_residues SWDKIGIEDKLLSWHEIMEAEEYVYTVGVAGEEFFNGLKQRKIIGGKCPKCGRIYVPARLYCEECFVKNDFVEVTTKPYI DTYTVVYKDDEGNKLEKPQVIALIRFEGTHGGLLAYIEGEADIGKEVEILEYKIPLIVRVK
Specific function: Unknown
COG id: COG1545
COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16287; Mature: 16156
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWDKIGIEDKLLSWHEIMEAEEYVYTVGVAGEEFFNGLKQRKIIGGKCPKCGRIYVPAR CCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEECHH LYCEECFVKNDFVEVTTKPYIDTYTVVYKDDEGNKLEKPQVIALIRFEGTHGGLLAYIEG HHHHHHHCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEEC EADIGKEVEILEYKIPLIVRVK CCCCCCCEEEEEEECCEEEEEC >Mature Secondary Structure SWDKIGIEDKLLSWHEIMEAEEYVYTVGVAGEEFFNGLKQRKIIGGKCPKCGRIYVPAR CCCCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEECHH LYCEECFVKNDFVEVTTKPYIDTYTVVYKDDEGNKLEKPQVIALIRFEGTHGGLLAYIEG HHHHHHHCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEEC EADIGKEVEILEYKIPLIVRVK CCCCCCCEEEEEEECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA