| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is cutM [H]
Identifier: 15922095
GI number: 15922095
Start: 1801048
End: 1801899
Strand: Reverse
Name: cutM [H]
Synonym: ST1783
Alternate gene names: 15922095
Gene position: 1801899-1801048 (Counterclockwise)
Preceding gene: 15922096
Following gene: 15922094
Centisome position: 66.87
GC content: 37.32
Gene sequence:
>852_bases ATGTTTCCTCCTCAATTCGGATACTACAGACCATCATCTCTTGCAGACGCATTAGATTTCATGAGTGGTGGGGGTACAAA ACCTCTTGCTGGAGGACAAAGTTTAATACCTATGTTAAAGTTTCGCCTTATACAACCTAAATTCCTTGTTGACCTTAACT CTCTTAGGGAATTATACTTCATAAGAGATGAGGGAAATACAGTCTCTATAGGTTCTATGATAAAACACGCTGATATTGTT AAAGATCTAACTATAAGGAATAAATTACCGTTACTTTCACATACAGCATTGAAAGTTGGAGATATGCAGGTTAGAAACAT GGGTACAATAGGTGGAAGTCTAAGTAACGCCGATCCATCGGCAGATTATCCTGCAGTAGCACTAGCCTATGATGCAAAAA TGGTTTTAATTTCATCTTCTGGAGAAAGAGAAGTTTCTGCAAAGGACTTCTTTAAGGGTCCATTCACTACTGAACTTAGA GAAGATGAAATACTTAGAGAGATAAAATTCCCTGTACTTCAAGGTTACAAATTTAAGTACGAGAAAATTGTTAGAAGAGC CGGAGACTTTGCTTTAGTTGGAATGGCAGTTTTAGCCAAAGTTGAAGGTAATAAGGTTGAAGATGTAAGAGTAGCCTATA CTGGGGTTAGTGATAAGCCTTATAGGCCCTATGAGCTTGAGAAAATGCTAGTCGGTGAAGCTTCATTAAGTAAGATTAAG GAATTTGCAGAAAAAGTTTCAAACTCCATTAATCCTCCCTCTGATTCAAGAGGGAGTTCATCTTATAGAAGGAAAGTTAC TCAACTCGTTACCATAAATGTGTTAAAAGAGGTGTTAGGAGTTGTTAGTTAG
Upstream 100 bases:
>100_bases GCTAAGAAAAAATATGAATAGTTGTTCATATTTTACATTAATTACTTTTTATACGAAACGAATACAAAAATTTTTATATT GTAATGAGTAGAAAGACATA
Downstream 100 bases:
>100_bases ACCGGGAGAAAAGGTAAAAATTAGGGTAAAAGTTAACGGAGTTTGGTATGAAAGAGATATTGAGCCTAGAATGTTATTAG TACATTTCTTAAGGGACGAA
Product: carbon-monoxide dehydrogenase middle subunit
Products: NA
Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MFPPQFGYYRPSSLADALDFMSGGGTKPLAGGQSLIPMLKFRLIQPKFLVDLNSLRELYFIRDEGNTVSIGSMIKHADIV KDLTIRNKLPLLSHTALKVGDMQVRNMGTIGGSLSNADPSADYPAVALAYDAKMVLISSSGEREVSAKDFFKGPFTTELR EDEILREIKFPVLQGYKFKYEKIVRRAGDFALVGMAVLAKVEGNKVEDVRVAYTGVSDKPYRPYELEKMLVGEASLSKIK EFAEKVSNSINPPSDSRGSSSYRRKVTQLVTINVLKEVLGVVS
Sequences:
>Translated_283_residues MFPPQFGYYRPSSLADALDFMSGGGTKPLAGGQSLIPMLKFRLIQPKFLVDLNSLRELYFIRDEGNTVSIGSMIKHADIV KDLTIRNKLPLLSHTALKVGDMQVRNMGTIGGSLSNADPSADYPAVALAYDAKMVLISSSGEREVSAKDFFKGPFTTELR EDEILREIKFPVLQGYKFKYEKIVRRAGDFALVGMAVLAKVEGNKVEDVRVAYTGVSDKPYRPYELEKMLVGEASLSKIK EFAEKVSNSINPPSDSRGSSSYRRKVTQLVTINVLKEVLGVVS >Mature_283_residues MFPPQFGYYRPSSLADALDFMSGGGTKPLAGGQSLIPMLKFRLIQPKFLVDLNSLRELYFIRDEGNTVSIGSMIKHADIV KDLTIRNKLPLLSHTALKVGDMQVRNMGTIGGSLSNADPSADYPAVALAYDAKMVLISSSGEREVSAKDFFKGPFTTELR EDEILREIKFPVLQGYKFKYEKIVRRAGDFALVGMAVLAKVEGNKVEDVRVAYTGVSDKPYRPYELEKMLVGEASLSKIK EFAEKVSNSINPPSDSRGSSSYRRKVTQLVTINVLKEVLGVVS
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1789231, Length=283, Percent_Identity=28.6219081272085, Blast_Score=117, Evalue=8e-28, Organism=Caenorhabditis elegans, GI17540638, Length=243, Percent_Identity=26.3374485596708, Blast_Score=70, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005107 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR002346 [H]
Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 31256; Mature: 31256
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPPQFGYYRPSSLADALDFMSGGGTKPLAGGQSLIPMLKFRLIQPKFLVDLNSLRELYF CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCEEEE IRDEGNTVSIGSMIKHADIVKDLTIRNKLPLLSHTALKVGDMQVRNMGTIGGSLSNADPS EECCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHEECCEEECCCCCCCCCCCCCCCC ADYPAVALAYDAKMVLISSSGEREVSAKDFFKGPFTTELREDEILREIKFPVLQGYKFKY CCCCEEEEEECCEEEEEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHH EKIVRRAGDFALVGMAVLAKVEGNKVEDVRVAYTGVSDKPYRPYELEKMLVGEASLSKIK HHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCHHHHHHHH EFAEKVSNSINPPSDSRGSSSYRRKVTQLVTINVLKEVLGVVS HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFPPQFGYYRPSSLADALDFMSGGGTKPLAGGQSLIPMLKFRLIQPKFLVDLNSLRELYF CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCEEEE IRDEGNTVSIGSMIKHADIVKDLTIRNKLPLLSHTALKVGDMQVRNMGTIGGSLSNADPS EECCCCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHEECCEEECCCCCCCCCCCCCCCC ADYPAVALAYDAKMVLISSSGEREVSAKDFFKGPFTTELREDEILREIKFPVLQGYKFKY CCCCEEEEEECCEEEEEECCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHH EKIVRRAGDFALVGMAVLAKVEGNKVEDVRVAYTGVSDKPYRPYELEKMLVGEASLSKIK HHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCHHHHHHHH EFAEKVSNSINPPSDSRGSSSYRRKVTQLVTINVLKEVLGVVS HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]