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The map label for this gene is ybhR [C]

Identifier: 15922082

GI number: 15922082

Start: 1788514

End: 1789398

Strand: Reverse

Name: ybhR [C]

Synonym: ST1771

Alternate gene names: 15922082

Gene position: 1789398-1788514 (Counterclockwise)

Preceding gene: 15922083

Following gene: 15922080

Centisome position: 66.4

GC content: 35.03

Gene sequence:

>885_bases
ATGACAGTAGAAGTTCAAAAAGAAGAAAAGAGAAATTTATCGCTTTATCACGGTTTATGGACACTAACATCTAGGGAATT
GAAGAAATGGTATAAAGCCCCAGTAATCCTTTTACTCTCCATAATACAGCCAATATTCTGGATAGCATTATTTGGAAAAG
CTATGAATCTAGGGAGCATATTTACTGGCACATCGATTAATCTTCCAGGGGTAATAATACCTAAAACTATAATTGATCAA
ATTGGACAAGAAATACTTAAACAGACATTCGGGACAACGGATTACTTCTCTTTCCTAGCTGCAGGAATGCTATCCTTTAT
TGTATTATTTACTTCAATGCAGAGTGGTATGTCAATAGTCTGGGACAGAAGATTAGGTGTGCTGGATAGATTACTAACAA
CGCCAGTACCCAGAGGAAACATTATTATAGCTAAAGTTCTAAATTCTGTTATTAGATCATTAGTTCAAGCAACAATAGTC
TTAGTAGTTGCAGTATTACTTGGAATGACATTTGCACCGGGTATTAATGCTTTAGATTTCTTAGGAGTTTATGCAGCACT
ATTTCTAATGTCTTTCGGACTATCATCACTATTCCTAATGCTTGCATTAAGAGCAACTGATTGGCAATCACAAATGGCAA
TAATGAACCTACTTAACTTACCGTTACTCTTTACTAGTAATGCATTTTACCCAATAAAATCAATGCCTTCATGGTTAAAG
CCCATAGCTTATGTAAATCCGCTAACTTACTCTAACGGTGCAATAAGAGGACTTTTACTCGGAATACAGACAAACTTAAC
AATTGACTTCCTCTACCTAGGCTTGTTTGCATTAATCTTATCAACTATAGGAATTCTATTATCGTGGAAGTACTTATCAA
CTTGA

Upstream 100 bases:

>100_bases
ATGAAGTTTACATGGAGATAACTGGTAAAAGTTTAAGAGATGAAGAAGCAAGCTCACAAGAAATGTTTGCATTTAGGAGA
ACCTTAAGGAGGGCGAGAGG

Downstream 100 bases:

>100_bases
ATTTCTCTTAATATAATAAGTGCGGGTAGCAAGATTTCTTATTAAAAGTTTTCCCCTATTTTACTATTTATTTTTTATAG
GAAAATTGTTGATATTCATA

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter Permease Protein; ABC-Type Multidrug Transport System Permease Component; ABC-2 Type Transporter Superfamily; Multidrug ABC Transporter Permease Protein; ABC Transporter; Multidrug ABC Transporter Permease; ABC Transporter Permease; ABC-Type Drug Export System Membrane Protein; Daunorubicin Resistance Membrane Protein; Daunorubicin Resistance ABC Transporter Membrane Protein; Multidrug ABC Transporter Permease Component; ABC Transporter Permease Component; Antibiotic ABC Transporter Transmembrane Protein; Multidrug Efflux ABC Transporter; ABC Transporter Transmembrane Subunit; Abc-2 Type Transporter Integral Membrane Subunit; ABC-Type Multidrug Transport System Permease Protein; Efflux ABC Transporter Permease Protein; ABC Efflux Pump Inner Membrane Subunit; Drug ABC Transporter Membrane Protein; ABC Multidrug Efflux Pump Inner Membrane Subunit; ABC-Transporter; Drug Exporter ABC Transporter Permease; ABC Multidrug Transporter Permease Component; Daunorubicin Resistance Transmembrane Protein; ABC Type Transporter Permease Component; Antibiotic Export Permease Protein; ABC-2 Type Transport System Permease Protein; Daunorubicin Resistance ABC Transporter Permease; ABC-Type Drug Export System; Abc-2 Type Transporter; ABC-Type Multidrug Transport System; ABC-Type Multidrug Transport System ATPase Component; Transporter ABC-2 Integral Membrane Protein Family; ABC-Type Multidrug Transport System Permease; Antibiotic Resistance ABC Transporter Permease Protein; ABC Transporter Protein

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MTVEVQKEEKRNLSLYHGLWTLTSRELKKWYKAPVILLLSIIQPIFWIALFGKAMNLGSIFTGTSINLPGVIIPKTIIDQ
IGQEILKQTFGTTDYFSFLAAGMLSFIVLFTSMQSGMSIVWDRRLGVLDRLLTTPVPRGNIIIAKVLNSVIRSLVQATIV
LVVAVLLGMTFAPGINALDFLGVYAALFLMSFGLSSLFLMLALRATDWQSQMAIMNLLNLPLLFTSNAFYPIKSMPSWLK
PIAYVNPLTYSNGAIRGLLLGIQTNLTIDFLYLGLFALILSTIGILLSWKYLST

Sequences:

>Translated_294_residues
MTVEVQKEEKRNLSLYHGLWTLTSRELKKWYKAPVILLLSIIQPIFWIALFGKAMNLGSIFTGTSINLPGVIIPKTIIDQ
IGQEILKQTFGTTDYFSFLAAGMLSFIVLFTSMQSGMSIVWDRRLGVLDRLLTTPVPRGNIIIAKVLNSVIRSLVQATIV
LVVAVLLGMTFAPGINALDFLGVYAALFLMSFGLSSLFLMLALRATDWQSQMAIMNLLNLPLLFTSNAFYPIKSMPSWLK
PIAYVNPLTYSNGAIRGLLLGIQTNLTIDFLYLGLFALILSTIGILLSWKYLST
>Mature_293_residues
TVEVQKEEKRNLSLYHGLWTLTSRELKKWYKAPVILLLSIIQPIFWIALFGKAMNLGSIFTGTSINLPGVIIPKTIIDQI
GQEILKQTFGTTDYFSFLAAGMLSFIVLFTSMQSGMSIVWDRRLGVLDRLLTTPVPRGNIIIAKVLNSVIRSLVQATIVL
VVAVLLGMTFAPGINALDFLGVYAALFLMSFGLSSLFLMLALRATDWQSQMAIMNLLNLPLLFTSNAFYPIKSMPSWLKP
IAYVNPLTYSNGAIRGLLLGIQTNLTIDFLYLGLFALILSTIGILLSWKYLST

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32666; Mature: 32534

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVEVQKEEKRNLSLYHGLWTLTSRELKKWYKAPVILLLSIIQPIFWIALFGKAMNLGSI
CCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
FTGTSINLPGVIIPKTIIDQIGQEILKQTFGTTDYFSFLAAGMLSFIVLFTSMQSGMSIV
ECCCCCCCCCEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
WDRRLGVLDRLLTTPVPRGNIIIAKVLNSVIRSLVQATIVLVVAVLLGMTFAPGINALDF
HHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LGVYAALFLMSFGLSSLFLMLALRATDWQSQMAIMNLLNLPLLFTSNAFYPIKSMPSWLK
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHEECCCCCCHHCCHHHHH
PIAYVNPLTYSNGAIRGLLLGIQTNLTIDFLYLGLFALILSTIGILLSWKYLST
HHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA