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The map label for this gene is ybeC [H]

Identifier: 15922067

GI number: 15922067

Start: 1770474

End: 1771997

Strand: Direct

Name: ybeC [H]

Synonym: ST1757

Alternate gene names: 15922067

Gene position: 1770474-1771997 (Clockwise)

Preceding gene: 15922066

Following gene: 15922070

Centisome position: 65.7

GC content: 35.96

Gene sequence:

>1524_bases
ATGGAGAAAAAAACAAATTACTTAAGAAAGGAACTTAGCTTATTAAATTTAGTAATTATTGGTATAGCGGGTGCCGTAGG
AACCGGAGTACTATTTAGCTCTGCTGGAATGGCAGCATTGGCTGGTCCAGCAATTGTAATATCTTGGCTCCTTGGAGGTA
TATTTTATTTATTTATAGGCCTTACTTATGTTCAACTTGCGTCTTATTATCCAGAAGCTGGAGGACCTTCTAGGTACCCA
TTATATTCTCACGGAAGAATCACTAATTTAATAAATGCCTTTTCTGATCTGATTTGGTATTTGTTTATTCCACCTATCGA
GGCTTTAGCAGTAGTAGAAGGGTTAAATTATTTCACTAGTAATTACAAGATTGTTTTGATTAACAGTAATGGTTTTCCTA
CACTCTTAGGAGCTATAATAGGAGTTTTAATTATGCTACTCTTTATACCGTTTAATTATTATAGCGTGAGATTTTTTGGT
ATGTCCACAACTTGGTTCGGAAGCATAAAGCTCTTGCTATACTTGGCCGTACTTTTAGGTTTTTTAATTTATTTCTTTCA
TTTCAGTAATTTTACAGCATATGGAGGATTTGCTCCCTTCGGTTTTGCGGGAATATTCAGTGCAATTCCATTAGCGATGT
TTGCATTTGGCGGAATAGGGGTAATACCAGATTATGCAGAAGAGACTAAAGATCATAGTGTGTTGGGAAAAGCCATAATT
TATACTGTACTAGGACAAACTGCGATTTATGTTGCATTTGCTATTGCATTTATAGCCGCATTAGATTGGAAAGGTTTAGG
AATTTCTCCAGGAAATTGGGCGGCTTTGAGTAATCTCCCGGGAAATCCGTTTATTGACATTGCTGGTACCAGAGGAGTAA
TTTCCTTGCTAGTATTAACCGGAATTATAGGAATCATTGGTCCTTTTGTCACTGGTTATATTTATCAAGGTGGGGGTATG
AGAGTTCTATTTGCTATTAGTAGATCTAAATATGTTTCTGAAAAAATCCAGGAATTAAATAAATATTCCATCCCACTTTG
GGCGTTAATAGTATTTGTTATAGTAGGAGCAGTTGTTGCCTATATTGCGGCACCTCTTCCAACAATATACGGTTTAATAA
GCGATTCCGTAGTAGCAGGTTATATAGGTTTCTCTGCAAATCCAGTTGCAATGCAAGCGTTAATATCTAAAGGTAAGATG
AAGCCAATGATAGCTGGGTCTAATATAATCTCTGCACTGGCATTTATTTTCGCATCTTTAATAATATATTGGAGCGGTTG
GCCATCAGTACCTTATGCAGTTCTATTGCTACTTATAGCTTGCATAGTTTTCTCGGTAGTTTACAAGGTAAAAGAAGACT
TTTGGAATTCCATATGGTATATTGCTTATATAGGCTTCTTGACTTTAATGACCTTCATAGGTGATAATGGGGCTTTAGCA
ATACTAAACTTTTATGAGGCTTCTGCTGTTACAGCGATAGCTTCATTAATTTTCTATTATTGGGGTATAAGGTCTTCAAA
ATGA

Upstream 100 bases:

>100_bases
TTTGATTTCAAAAATAAAGTAAATTTGCAAAAGAACCGTGAATTTCCCCATTTACTGAAATAACGAAAAATTTTTAACAA
AGAGTATTCTTAGATATTTT

Downstream 100 bases:

>100_bases
GTAAGTGTTTTTAAGAATGTAAGTGACATACAGCTTTTAATCTCGATAATCTTGATGAGGAAGCTAAAATTTTAGTTTTT
TGGATATTTTCTTCAAATTA

Product: amino acid transporter

Products: D-glycine [Cytoplasm]; D-alanine [Cytoplasm]; Proton [Cytoplasm]; D-serine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MEKKTNYLRKELSLLNLVIIGIAGAVGTGVLFSSAGMAALAGPAIVISWLLGGIFYLFIGLTYVQLASYYPEAGGPSRYP
LYSHGRITNLINAFSDLIWYLFIPPIEALAVVEGLNYFTSNYKIVLINSNGFPTLLGAIIGVLIMLLFIPFNYYSVRFFG
MSTTWFGSIKLLLYLAVLLGFLIYFFHFSNFTAYGGFAPFGFAGIFSAIPLAMFAFGGIGVIPDYAEETKDHSVLGKAII
YTVLGQTAIYVAFAIAFIAALDWKGLGISPGNWAALSNLPGNPFIDIAGTRGVISLLVLTGIIGIIGPFVTGYIYQGGGM
RVLFAISRSKYVSEKIQELNKYSIPLWALIVFVIVGAVVAYIAAPLPTIYGLISDSVVAGYIGFSANPVAMQALISKGKM
KPMIAGSNIISALAFIFASLIIYWSGWPSVPYAVLLLLIACIVFSVVYKVKEDFWNSIWYIAYIGFLTLMTFIGDNGALA
ILNFYEASAVTAIASLIFYYWGIRSSK

Sequences:

>Translated_507_residues
MEKKTNYLRKELSLLNLVIIGIAGAVGTGVLFSSAGMAALAGPAIVISWLLGGIFYLFIGLTYVQLASYYPEAGGPSRYP
LYSHGRITNLINAFSDLIWYLFIPPIEALAVVEGLNYFTSNYKIVLINSNGFPTLLGAIIGVLIMLLFIPFNYYSVRFFG
MSTTWFGSIKLLLYLAVLLGFLIYFFHFSNFTAYGGFAPFGFAGIFSAIPLAMFAFGGIGVIPDYAEETKDHSVLGKAII
YTVLGQTAIYVAFAIAFIAALDWKGLGISPGNWAALSNLPGNPFIDIAGTRGVISLLVLTGIIGIIGPFVTGYIYQGGGM
RVLFAISRSKYVSEKIQELNKYSIPLWALIVFVIVGAVVAYIAAPLPTIYGLISDSVVAGYIGFSANPVAMQALISKGKM
KPMIAGSNIISALAFIFASLIIYWSGWPSVPYAVLLLLIACIVFSVVYKVKEDFWNSIWYIAYIGFLTLMTFIGDNGALA
ILNFYEASAVTAIASLIFYYWGIRSSK
>Mature_507_residues
MEKKTNYLRKELSLLNLVIIGIAGAVGTGVLFSSAGMAALAGPAIVISWLLGGIFYLFIGLTYVQLASYYPEAGGPSRYP
LYSHGRITNLINAFSDLIWYLFIPPIEALAVVEGLNYFTSNYKIVLINSNGFPTLLGAIIGVLIMLLFIPFNYYSVRFFG
MSTTWFGSIKLLLYLAVLLGFLIYFFHFSNFTAYGGFAPFGFAGIFSAIPLAMFAFGGIGVIPDYAEETKDHSVLGKAII
YTVLGQTAIYVAFAIAFIAALDWKGLGISPGNWAALSNLPGNPFIDIAGTRGVISLLVLTGIIGIIGPFVTGYIYQGGGM
RVLFAISRSKYVSEKIQELNKYSIPLWALIVFVIVGAVVAYIAAPLPTIYGLISDSVVAGYIGFSANPVAMQALISKGKM
KPMIAGSNIISALAFIFASLIIYWSGWPSVPYAVLLLLIACIVFSVVYKVKEDFWNSIWYIAYIGFLTLMTFIGDNGALA
ILNFYEASAVTAIASLIFYYWGIRSSK

Specific function: Uptake of an yet unknown amino-acid with the concomitant import of a proton [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. AGT (TC 2.A.3.11) family [H]

Homologues:

Organism=Escherichia coli, GI1790653, Length=364, Percent_Identity=23.9010989010989, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786302, Length=394, Percent_Identity=20.5583756345178, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI48994972, Length=383, Percent_Identity=21.6710182767624, Blast_Score=66, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 55009; Mature: 55009

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKTNYLRKELSLLNLVIIGIAGAVGTGVLFSSAGMAALAGPAIVISWLLGGIFYLFIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LTYVQLASYYPEAGGPSRYPLYSHGRITNLINAFSDLIWYLFIPPIEALAVVEGLNYFTS
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC
NYKIVLINSNGFPTLLGAIIGVLIMLLFIPFNYYSVRFFGMSTTWFGSIKLLLYLAVLLG
CCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHH
FLIYFFHFSNFTAYGGFAPFGFAGIFSAIPLAMFAFGGIGVIPDYAEETKDHSVLGKAII
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
YTVLGQTAIYVAFAIAFIAALDWKGLGISPGNWAALSNLPGNPFIDIAGTRGVISLLVLT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCEEEECCCHHHHHHHHHH
GIIGIIGPFVTGYIYQGGGMRVLFAISRSKYVSEKIQELNKYSIPLWALIVFVIVGAVVA
HHHHHHHHHHHCEEECCCCEEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
YIAAPLPTIYGLISDSVVAGYIGFSANPVAMQALISKGKMKPMIAGSNIISALAFIFASL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHH
IIYWSGWPSVPYAVLLLLIACIVFSVVYKVKEDFWNSIWYIAYIGFLTLMTFIGDNGALA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
ILNFYEASAVTAIASLIFYYWGIRSSK
EEEHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEKKTNYLRKELSLLNLVIIGIAGAVGTGVLFSSAGMAALAGPAIVISWLLGGIFYLFIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LTYVQLASYYPEAGGPSRYPLYSHGRITNLINAFSDLIWYLFIPPIEALAVVEGLNYFTS
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC
NYKIVLINSNGFPTLLGAIIGVLIMLLFIPFNYYSVRFFGMSTTWFGSIKLLLYLAVLLG
CCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHH
FLIYFFHFSNFTAYGGFAPFGFAGIFSAIPLAMFAFGGIGVIPDYAEETKDHSVLGKAII
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
YTVLGQTAIYVAFAIAFIAALDWKGLGISPGNWAALSNLPGNPFIDIAGTRGVISLLVLT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCEEEECCCHHHHHHHHHH
GIIGIIGPFVTGYIYQGGGMRVLFAISRSKYVSEKIQELNKYSIPLWALIVFVIVGAVVA
HHHHHHHHHHHCEEECCCCEEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
YIAAPLPTIYGLISDSVVAGYIGFSANPVAMQALISKGKMKPMIAGSNIISALAFIFASL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHH
IIYWSGWPSVPYAVLLLLIACIVFSVVYKVKEDFWNSIWYIAYIGFLTLMTFIGDNGALA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
ILNFYEASAVTAIASLIFYYWGIRSSK
EEEHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: D-glycine [Periplasm]; D-alanine [Periplasm]; Proton [Periplasm]; D-serine [Periplasm] [C]

Specific reaction: Proton [Periplasm] + D-glycine [Periplasm] = Proton [Cytoplasm] + D-glycine [Cytoplasm] Proton [Periplasm] + D-alanine [Periplasm] = Proton [Cytoplasm] + D-alanine [Cytoplasm] Proton [Periplasm] + D-serine [Periplasm] = Proton [Cytoplasm] + D-serine [Cyto

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 12730183 [H]