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The map label for this gene is ycgM [C]

Identifier: 15922009

GI number: 15922009

Start: 1706538

End: 1707383

Strand: Reverse

Name: ycgM [C]

Synonym: ST1705

Alternate gene names: 15922009

Gene position: 1707383-1706538 (Counterclockwise)

Preceding gene: 15922011

Following gene: 15922007

Centisome position: 63.36

GC content: 35.11

Gene sequence:

>846_bases
ATGAAAATAGGTTTTGCTCTAACAGAAAATGGGGAAAAGAAAGTTGTGTTCATAGAAGGTGAAAAATATTATGAGATAAA
GAAAGAGGGATTAGATTGCGTTGTATCTAATCCAACATCATTTATTAAAGCATATGACTTAATGGTGAATCTACCTAAGA
CTGAGGTAAAGATAAAAAAGTTTCTACCACCTTTATTCCCTAATAAAATTTTTTTACCTGCTGTGAACTTCCGCTCTCAT
TCATCAGAAACTTCGATGACTCCACCAAAATCACCTTACTTTTTTACCAAATTTAGTAGTAATAGTGTAGTTGGGCCGGA
AGATTACATAATTATCCCAAGAGATTTAAAAAGGGTGGACTATGAAGGGGAAATAGGGATTATAATTGGAAAGAGAGGGA
AATACATAAAGAAAGAGGATGCAATAGATTATGTCTTCGGTTATACAATAGTAAATGATGTAAGCTTTAGGGATTATCAG
TTTCCAGAACTTCACCCTTACGGTTTGAATTGGGTTATGGGAAAAGCGTTAGATACCGGGTTGCCGATTGGTCCATGGAT
TGTTACTAAAGACGAAATTAAGAATTTCAAACTTAGAATAATAACTAGGCTTAACGGGCAAGTTGTACAAGATGGAAATA
CAGAAGATATGATATTTTCTGTTGAGGATCTGATTTCTTATCTCAGCCAAGGAATTACCCTAGAGCCCGGAGACGTAATA
ACTACTGGTACACCAGCCGGTGTTGCTGAATTTACTGGTAAAAAGTACCTTGAAGACGGAGATGTTATAGAAGTTGAGGT
CGAGAAAATAGGTGTTTTAAGAAATTATGTAAGAAAAGAGAGTTAA

Upstream 100 bases:

>100_bases
TAGTTTTACCACTACCATTTTTCCCAATCAAACCAACGATTTCGTTATCGCTGACAACAAGTTTATCATTTATAATTAGC
ATAGTATATGTGAGGCTTAT

Downstream 100 bases:

>100_bases
TCCCACACAATAACTGTTTTTATTTCTCCACTAGGCTTTCTCATTAAAACTTCTGGCGCTTGCTCAACAGAAACTTTTGA
AGTTATCATTCTTTGGAGAA

Product: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MKIGFALTENGEKKVVFIEGEKYYEIKKEGLDCVVSNPTSFIKAYDLMVNLPKTEVKIKKFLPPLFPNKIFLPAVNFRSH
SSETSMTPPKSPYFFTKFSSNSVVGPEDYIIIPRDLKRVDYEGEIGIIIGKRGKYIKKEDAIDYVFGYTIVNDVSFRDYQ
FPELHPYGLNWVMGKALDTGLPIGPWIVTKDEIKNFKLRIITRLNGQVVQDGNTEDMIFSVEDLISYLSQGITLEPGDVI
TTGTPAGVAEFTGKKYLEDGDVIEVEVEKIGVLRNYVRKES

Sequences:

>Translated_281_residues
MKIGFALTENGEKKVVFIEGEKYYEIKKEGLDCVVSNPTSFIKAYDLMVNLPKTEVKIKKFLPPLFPNKIFLPAVNFRSH
SSETSMTPPKSPYFFTKFSSNSVVGPEDYIIIPRDLKRVDYEGEIGIIIGKRGKYIKKEDAIDYVFGYTIVNDVSFRDYQ
FPELHPYGLNWVMGKALDTGLPIGPWIVTKDEIKNFKLRIITRLNGQVVQDGNTEDMIFSVEDLISYLSQGITLEPGDVI
TTGTPAGVAEFTGKKYLEDGDVIEVEVEKIGVLRNYVRKES
>Mature_281_residues
MKIGFALTENGEKKVVFIEGEKYYEIKKEGLDCVVSNPTSFIKAYDLMVNLPKTEVKIKKFLPPLFPNKIFLPAVNFRSH
SSETSMTPPKSPYFFTKFSSNSVVGPEDYIIIPRDLKRVDYEGEIGIIIGKRGKYIKKEDAIDYVFGYTIVNDVSFRDYQ
FPELHPYGLNWVMGKALDTGLPIGPWIVTKDEIKNFKLRIITRLNGQVVQDGNTEDMIFSVEDLISYLSQGITLEPGDVI
TTGTPAGVAEFTGKKYLEDGDVIEVEVEKIGVLRNYVRKES

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI156231349, Length=230, Percent_Identity=43.9130434782609, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI40786394, Length=230, Percent_Identity=43.0434782608696, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI66348062, Length=187, Percent_Identity=35.2941176470588, Blast_Score=111, Evalue=8e-25,
Organism=Homo sapiens, GI215422413, Length=187, Percent_Identity=35.2941176470588, Blast_Score=111, Evalue=8e-25,
Organism=Homo sapiens, GI13654274, Length=187, Percent_Identity=35.2941176470588, Blast_Score=111, Evalue=8e-25,
Organism=Escherichia coli, GI1787428, Length=201, Percent_Identity=29.3532338308458, Blast_Score=87, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17557057, Length=196, Percent_Identity=35.2040816326531, Blast_Score=120, Evalue=8e-28,
Organism=Saccharomyces cerevisiae, GI6324161, Length=233, Percent_Identity=32.1888412017167, Blast_Score=101, Evalue=1e-22,
Organism=Drosophila melanogaster, GI28572127, Length=220, Percent_Identity=41.3636363636364, Blast_Score=169, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24663695, Length=271, Percent_Identity=33.9483394833948, Blast_Score=151, Evalue=4e-37,
Organism=Drosophila melanogaster, GI28571789, Length=212, Percent_Identity=33.9622641509434, Blast_Score=112, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 31806; Mature: 31806

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGFALTENGEKKVVFIEGEKYYEIKKEGLDCVVSNPTSFIKAYDLMVNLPKTEVKIKK
CEEEEEEECCCCEEEEEEECCEEEEEECCCCEEEECCCHHHHEEEEHEEECCCHHHHHHH
FLPPLFPNKIFLPAVNFRSHSSETSMTPPKSPYFFTKFSSNSVVGPEDYIIIPRDLKRVD
HCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCHHHHCC
YEGEIGIIIGKRGKYIKKEDAIDYVFGYTIVNDVSFRDYQFPELHPYGLNWVMGKALDTG
CCCCEEEEECCCCCEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEHHHHHCC
LPIGPWIVTKDEIKNFKLRIITRLNGQVVQDGNTEDMIFSVEDLISYLSQGITLEPGDVI
CCCCCEEEEHHHHCCEEEEEEEECCCEEEECCCCCCEEEEHHHHHHHHHCCCEECCCCEE
TTGTPAGVAEFTGKKYLEDGDVIEVEVEKIGVLRNYVRKES
ECCCCCCHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIGFALTENGEKKVVFIEGEKYYEIKKEGLDCVVSNPTSFIKAYDLMVNLPKTEVKIKK
CEEEEEEECCCCEEEEEEECCEEEEEECCCCEEEECCCHHHHEEEEHEEECCCHHHHHHH
FLPPLFPNKIFLPAVNFRSHSSETSMTPPKSPYFFTKFSSNSVVGPEDYIIIPRDLKRVD
HCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCHHHHCC
YEGEIGIIIGKRGKYIKKEDAIDYVFGYTIVNDVSFRDYQFPELHPYGLNWVMGKALDTG
CCCCEEEEECCCCCEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEHHHHHCC
LPIGPWIVTKDEIKNFKLRIITRLNGQVVQDGNTEDMIFSVEDLISYLSQGITLEPGDVI
CCCCCEEEEHHHHCCEEEEEEEECCCEEEECCCCCCEEEEHHHHHHHHHCCCEECCCCEE
TTGTPAGVAEFTGKKYLEDGDVIEVEVEKIGVLRNYVRKES
ECCCCCCHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]