| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is nodI [H]
Identifier: 15921975
GI number: 15921975
Start: 1670656
End: 1671651
Strand: Direct
Name: nodI [H]
Synonym: ST1672
Alternate gene names: 15921975
Gene position: 1670656-1671651 (Clockwise)
Preceding gene: 15921973
Following gene: 15921976
Centisome position: 62.0
GC content: 32.83
Gene sequence:
>996_bases ATGCTTATATTGAAGAATTTCAGTGACTCAATGCCATGTTCACTTTCTAAAAACTTTTTATATTTAGAGGTAATATGTAA CTTAATGATTAGAATAGTAAATCTCTATAAAAAGTTTGGTGATTTCTTAGCTCTTAAAGGAGTTTCCTTTGATGTAAATA ATGGAGAAGTTGTGGGCTTTGTTGGACTAAATGGAGCTGGTAAAACGACTACAATAAAAATTTCAGCTGGTGTAAATTTT CCTACATCTGGTGATGTGGAGATTGATGGATATAGTATTACTAAAGATAAAAGGAAAGCAAGTAGAAACGTAGGTTGGGT TCCAGAACTACCTAATTTTGAGCCGGATGTAAAAGCTTTGGATTACTTTGTCTATTTAGCTGGCTATTACGGTATTTCCT CTCAAGAAGCTAAAAACCTGGGCAAAAAGCTTTTAGAAGAGGTAGGTCTCTCAGAATGGATGAACGTAAAGATTGGTAAG TTTTCTCAAGGAATGAAGAAGAGGTTTGCCTTAGCTGTTTCATTAGCTGGTAATCCTAATAACTTTCTATTTGATGAAGT TTTAAATGGCTTAGATCCTGCAGGGATGCAATTCTTTAAAGATTTAGTAATAAAGATGAAAAATGAAGGGAGAGCTATAC TTTTCTCTTCTCATATTTTATCTGAGGTTGAAAACATAGCAGATAGAGTAGTGTTTATTCATAAAGGTAAGATAATTGGA ATTAAAAAGATGGAAGACTTAAGGAAAATGGTTTCAACAAACATTGTAAAAGCAGTGGTAAACAATTACAACGAAGCACT AAAGGTTGCTGAAAAATATGGTAAACCGGCTATAGTGAATGGACAAATAATTATATCTGATTTTAAGGGCGATATCTCTG AACTATCGAGCGAACTAAAACCTTATGGTTTAATAGAAATTGGTTATGAAAGACAAAATCTTGAAAGTGTTTTCTTCCAA TTAATTTCTGAGAGTGAAAAAAGTGAAAGCCGTTGA
Upstream 100 bases:
>100_bases TAAGAAAATTAATATAGAAAGTCTTAAAAATGTTCTTCTAAAATCATAAAGTAGCGGATTTACCATATATTTTACATGTT ATTATTAGATTTTAAGTTTA
Downstream 100 bases:
>100_bases TGCAATTAATGAACTTTTTGCCAATTATCGGCTCATCATCCTTACTTTAATTATAGCGATAATTGGTGCTATAGTAGTGG GTATTATTTCTTTACTTTTA
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: Nodulation ATP-binding protein I [H]
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MLILKNFSDSMPCSLSKNFLYLEVICNLMIRIVNLYKKFGDFLALKGVSFDVNNGEVVGFVGLNGAGKTTTIKISAGVNF PTSGDVEIDGYSITKDKRKASRNVGWVPELPNFEPDVKALDYFVYLAGYYGISSQEAKNLGKKLLEEVGLSEWMNVKIGK FSQGMKKRFALAVSLAGNPNNFLFDEVLNGLDPAGMQFFKDLVIKMKNEGRAILFSSHILSEVENIADRVVFIHKGKIIG IKKMEDLRKMVSTNIVKAVVNNYNEALKVAEKYGKPAIVNGQIIISDFKGDISELSSELKPYGLIEIGYERQNLESVFFQ LISESEKSESR
Sequences:
>Translated_331_residues MLILKNFSDSMPCSLSKNFLYLEVICNLMIRIVNLYKKFGDFLALKGVSFDVNNGEVVGFVGLNGAGKTTTIKISAGVNF PTSGDVEIDGYSITKDKRKASRNVGWVPELPNFEPDVKALDYFVYLAGYYGISSQEAKNLGKKLLEEVGLSEWMNVKIGK FSQGMKKRFALAVSLAGNPNNFLFDEVLNGLDPAGMQFFKDLVIKMKNEGRAILFSSHILSEVENIADRVVFIHKGKIIG IKKMEDLRKMVSTNIVKAVVNNYNEALKVAEKYGKPAIVNGQIIISDFKGDISELSSELKPYGLIEIGYERQNLESVFFQ LISESEKSESR >Mature_331_residues MLILKNFSDSMPCSLSKNFLYLEVICNLMIRIVNLYKKFGDFLALKGVSFDVNNGEVVGFVGLNGAGKTTTIKISAGVNF PTSGDVEIDGYSITKDKRKASRNVGWVPELPNFEPDVKALDYFVYLAGYYGISSQEAKNLGKKLLEEVGLSEWMNVKIGK FSQGMKKRFALAVSLAGNPNNFLFDEVLNGLDPAGMQFFKDLVIKMKNEGRAILFSSHILSEVENIADRVVFIHKGKIIG IKKMEDLRKMVSTNIVKAVVNNYNEALKVAEKYGKPAIVNGQIIISDFKGDISELSSELKPYGLIEIGYERQNLESVFFQ LISESEKSESR
Specific function: Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modifi
COG id: COG1131
COG function: function code V; ABC-type multidrug transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI153792144, Length=307, Percent_Identity=27.3615635179153, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI27262624, Length=331, Percent_Identity=27.190332326284, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI27262626, Length=331, Percent_Identity=27.190332326284, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI45446740, Length=254, Percent_Identity=27.1653543307087, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI47078218, Length=254, Percent_Identity=27.1653543307087, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI27436953, Length=302, Percent_Identity=25.8278145695364, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI105990541, Length=197, Percent_Identity=28.4263959390863, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI6005701, Length=300, Percent_Identity=25.3333333333333, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI27477115, Length=309, Percent_Identity=25.2427184466019, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI150417984, Length=196, Percent_Identity=31.6326530612245, Blast_Score=105, Evalue=8e-23, Organism=Homo sapiens, GI116734710, Length=203, Percent_Identity=28.5714285714286, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI21536376, Length=217, Percent_Identity=29.0322580645161, Blast_Score=101, Evalue=9e-22, Organism=Homo sapiens, GI31657092, Length=212, Percent_Identity=25, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI27881501, Length=203, Percent_Identity=27.0935960591133, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI30795238, Length=203, Percent_Identity=27.0935960591133, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI46592915, Length=207, Percent_Identity=28.0193236714976, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI46592956, Length=207, Percent_Identity=28.0193236714976, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI46592898, Length=215, Percent_Identity=27.906976744186, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI46592978, Length=207, Percent_Identity=28.0193236714976, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI46592971, Length=207, Percent_Identity=28.0193236714976, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI46592964, Length=207, Percent_Identity=28.0193236714976, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI42741659, Length=243, Percent_Identity=26.7489711934156, Blast_Score=72, Evalue=8e-13, Organism=Escherichia coli, GI87081782, Length=220, Percent_Identity=30, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1786319, Length=212, Percent_Identity=33.0188679245283, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI1789672, Length=218, Percent_Identity=31.1926605504587, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1787029, Length=214, Percent_Identity=30.3738317757009, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1789032, Length=214, Percent_Identity=29.9065420560748, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI48994943, Length=257, Percent_Identity=23.7354085603113, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1788225, Length=220, Percent_Identity=30.4545454545455, Blast_Score=98, Evalue=9e-22, Organism=Escherichia coli, GI1786398, Length=223, Percent_Identity=30.4932735426009, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1790467, Length=219, Percent_Identity=27.3972602739726, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1788761, Length=218, Percent_Identity=29.3577981651376, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1786872, Length=224, Percent_Identity=31.25, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1789593, Length=210, Percent_Identity=27.1428571428571, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI87081709, Length=236, Percent_Identity=25.4237288135593, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI48995001, Length=227, Percent_Identity=23.7885462555066, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787712, Length=235, Percent_Identity=26.3829787234043, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787792, Length=242, Percent_Identity=26.4462809917355, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1786703, Length=220, Percent_Identity=28.1818181818182, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790525, Length=216, Percent_Identity=26.8518518518519, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1787089, Length=209, Percent_Identity=27.2727272727273, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788210, Length=234, Percent_Identity=27.7777777777778, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1789991, Length=261, Percent_Identity=25.6704980842912, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1786563, Length=209, Percent_Identity=26.7942583732057, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI87081834, Length=221, Percent_Identity=26.2443438914027, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1787164, Length=204, Percent_Identity=28.921568627451, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI87081791, Length=239, Percent_Identity=23.4309623430962, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1788897, Length=228, Percent_Identity=25, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1787758, Length=203, Percent_Identity=26.6009852216749, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1790544, Length=230, Percent_Identity=22.6086956521739, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI145693107, Length=265, Percent_Identity=26.7924528301887, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1787105, Length=243, Percent_Identity=23.8683127572016, Blast_Score=68, Evalue=9e-13, Organism=Escherichia coli, GI1789751, Length=316, Percent_Identity=24.6835443037975, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1789873, Length=218, Percent_Identity=25.6880733944954, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI87082268, Length=216, Percent_Identity=25.9259259259259, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789963, Length=232, Percent_Identity=23.7068965517241, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1787370, Length=218, Percent_Identity=24.7706422018349, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI87082064, Length=172, Percent_Identity=25, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI87082267, Length=198, Percent_Identity=24.7474747474747, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17565586, Length=204, Percent_Identity=28.921568627451, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI115533608, Length=234, Percent_Identity=28.2051282051282, Blast_Score=108, Evalue=5e-24, Organism=Caenorhabditis elegans, GI71983523, Length=303, Percent_Identity=25.4125412541254, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71983510, Length=303, Percent_Identity=25.4125412541254, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71983516, Length=303, Percent_Identity=25.4125412541254, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17510237, Length=235, Percent_Identity=26.3829787234043, Blast_Score=104, Evalue=8e-23, Organism=Caenorhabditis elegans, GI193211015, Length=231, Percent_Identity=27.2727272727273, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI71996809, Length=231, Percent_Identity=27.2727272727273, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI193211017, Length=231, Percent_Identity=27.2727272727273, Blast_Score=81, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17558664, Length=228, Percent_Identity=28.0701754385965, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71992290, Length=219, Percent_Identity=29.2237442922374, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17569145, Length=208, Percent_Identity=29.3269230769231, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24666092, Length=227, Percent_Identity=31.7180616740088, Blast_Score=122, Evalue=3e-28, Organism=Drosophila melanogaster, GI221512771, Length=210, Percent_Identity=31.9047619047619, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI28574150, Length=226, Percent_Identity=28.7610619469027, Blast_Score=114, Evalue=8e-26, Organism=Drosophila melanogaster, GI116007328, Length=226, Percent_Identity=28.7610619469027, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI28573571, Length=215, Percent_Identity=30.6976744186047, Blast_Score=111, Evalue=7e-25, Organism=Drosophila melanogaster, GI24643674, Length=239, Percent_Identity=26.3598326359833, Blast_Score=111, Evalue=8e-25, Organism=Drosophila melanogaster, GI28573573, Length=222, Percent_Identity=30.1801801801802, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI24648314, Length=238, Percent_Identity=28.5714285714286, Blast_Score=101, Evalue=5e-22, Organism=Drosophila melanogaster, GI28571209, Length=225, Percent_Identity=25.3333333333333, Blast_Score=98, Evalue=6e-21, Organism=Drosophila melanogaster, GI221500365, Length=230, Percent_Identity=23.9130434782609, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI116007184, Length=230, Percent_Identity=23.9130434782609, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI28574744, Length=212, Percent_Identity=28.3018867924528, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI19920532, Length=268, Percent_Identity=22.3880597014925, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24580930, Length=268, Percent_Identity=22.3880597014925, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24643672, Length=197, Percent_Identity=23.8578680203046, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24662800, Length=211, Percent_Identity=27.0142180094787, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI24581191, Length=212, Percent_Identity=28.3018867924528, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI24581189, Length=212, Percent_Identity=28.3018867924528, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI24581193, Length=212, Percent_Identity=28.3018867924528, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI24581195, Length=212, Percent_Identity=28.3018867924528, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR015851 - InterPro: IPR005978 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 36848; Mature: 36848
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLILKNFSDSMPCSLSKNFLYLEVICNLMIRIVNLYKKFGDFLALKGVSFDVNNGEVVGF CEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEEECCCEEECCCCCEEEE VGLNGAGKTTTIKISAGVNFPTSGDVEIDGYSITKDKRKASRNVGWVPELPNFEPDVKAL EEECCCCCEEEEEEEECCCCCCCCCEEECCEEECHHHHHHHCCCCCCCCCCCCCCCHHHH DYFVYLAGYYGISSQEAKNLGKKLLEEVGLSEWMNVKIGKFSQGMKKRFALAVSLAGNPN HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHEEEEEEECCCCC NFLFDEVLNGLDPAGMQFFKDLVIKMKNEGRAILFSSHILSEVENIADRVVFIHKGKIIG CEEHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHEEEEECCEEEE IKKMEDLRKMVSTNIVKAVVNNYNEALKVAEKYGKPAIVNGQIIISDFKGDISELSSELK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEECCCCCHHHHHHHCC PYGLIEIGYERQNLESVFFQLISESEKSESR CCEEEEECCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLILKNFSDSMPCSLSKNFLYLEVICNLMIRIVNLYKKFGDFLALKGVSFDVNNGEVVGF CEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEEECCCEEECCCCCEEEE VGLNGAGKTTTIKISAGVNFPTSGDVEIDGYSITKDKRKASRNVGWVPELPNFEPDVKAL EEECCCCCEEEEEEEECCCCCCCCCEEECCEEECHHHHHHHCCCCCCCCCCCCCCCHHHH DYFVYLAGYYGISSQEAKNLGKKLLEEVGLSEWMNVKIGKFSQGMKKRFALAVSLAGNPN HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHEEEEEEECCCCC NFLFDEVLNGLDPAGMQFFKDLVIKMKNEGRAILFSSHILSEVENIADRVVFIHKGKIIG CEEHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHEEEEECCEEEE IKKMEDLRKMVSTNIVKAVVNNYNEALKVAEKYGKPAIVNGQIIISDFKGDISELSSELK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEECCCCCHHHHHHHCC PYGLIEIGYERQNLESVFFQLISESEKSESR CCEEEEECCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA