| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15921960
Identifier: 15921960
GI number: 15921960
Start: 1651815
End: 1652960
Strand: Direct
Name: 15921960
Synonym: ST1657
Alternate gene names: NA
Gene position: 1651815-1652960 (Clockwise)
Preceding gene: 15921959
Following gene: 15921962
Centisome position: 61.3
GC content: 31.24
Gene sequence:
>1146_bases ATGAGCTCTTCTGCAATTAAATATCTCAGTTTAGGTATGCTAATTATTATCTTATCTTTACCTCTTGCAGTTATTATCTG GTATATATCCTTACTTTTTGGAATCACACCGCCCATGAACGTGACAATTAATGGATTTCTCCTATCAATATTTTCTCCAA TGATTTTAAGCGGAGCTTTTTTAGGTATTATTAATATGGCGTCTTTTTATAGAATTAGAATAGGTTTAAGAGTATTAAAT TTAGATCATAACACTACATTAGGTGCTTTACTAAATGTTATTGCTTCAATCTTTTTATTTACTGGCAATTTATTAGTCTT ATTATCTGCATTGGTTTCAGTTATTAATATAATTACTATATTAGCCTGGATTTCAGCTGAAATATTAACTCTAATATTCT ATATTAGTGGCAATATATTTTTAGGAATAGGGTTAATGAGATTAGGAGAGCTAATGAAGAATTCTACGTTAAAAAACGGA GGAATGCTAATAACTTCTGTAGTTTTATCGTATTTTGGATATATAATAGCCTATTTAGGTTTAAGGAAGATAAGTTCACA ACAAATTGCTCATTATTTTCCGCTCATGTCAAATATAAGGGCCCCTTCAACTAAAAATGTTCTCTCAAGTAAAATAAAAA CTCAAGGAAATGAGGAACTAACTATAACCCATCCCATCTACTATAAGGAAACTGTTAAGGTACATAGGTTACAGTCACAA GAGACTAGAAGTGTACAGCAACAGCCATATCAAACGCAAAAGATTCCATCTCCACAACCGACAAAACAAGTATTACCCTC TACCTTATCCCAATCATACACGCCAACATCGATGCCTCAATCACAGACTACTTTTGTAATTAACGGAAACGGAATATTGA AGTCTGATGGCACAGTATACCTTAATATTTATGTCTCTCAGCCTTGCGTAATTTCTTCAGTAAAAATAGAAAATTTACCG TATTCTCCATTGTCTATACAGCCTCAAAGCTTACAGATAGGAAACAACCAAGTTTTGATAAAATTCGATAAAGTAGCTTT ATTAGGGTTATTAAAAGGAAAAGAGTATAAACTTTACCTTACTTTAAGAACCTATAATATATATTACCCAGATCAGGTAA TAAAAATAAAATACGAAACTACTTAA
Upstream 100 bases:
>100_bases ACTCAGTTACGTTAGTATTAAGTAATGGCCAAACTGTAAAAGTATTCTTGACTTTTACTTAACGTTAAAATTTTTTATTA ACATAGTCCACGATTATCAT
Downstream 100 bases:
>100_bases CGTTTTCTCATTATAAATACCGAAAGGATAACCCCAATTATAATGATTAATAAGACTCCAATATACACTTTAACATTAGT AGAATTATTTGAATGAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MSSSAIKYLSLGMLIIILSLPLAVIIWYISLLFGITPPMNVTINGFLLSIFSPMILSGAFLGIINMASFYRIRIGLRVLN LDHNTTLGALLNVIASIFLFTGNLLVLLSALVSVINIITILAWISAEILTLIFYISGNIFLGIGLMRLGELMKNSTLKNG GMLITSVVLSYFGYIIAYLGLRKISSQQIAHYFPLMSNIRAPSTKNVLSSKIKTQGNEELTITHPIYYKETVKVHRLQSQ ETRSVQQQPYQTQKIPSPQPTKQVLPSTLSQSYTPTSMPQSQTTFVINGNGILKSDGTVYLNIYVSQPCVISSVKIENLP YSPLSIQPQSLQIGNNQVLIKFDKVALLGLLKGKEYKLYLTLRTYNIYYPDQVIKIKYETT
Sequences:
>Translated_381_residues MSSSAIKYLSLGMLIIILSLPLAVIIWYISLLFGITPPMNVTINGFLLSIFSPMILSGAFLGIINMASFYRIRIGLRVLN LDHNTTLGALLNVIASIFLFTGNLLVLLSALVSVINIITILAWISAEILTLIFYISGNIFLGIGLMRLGELMKNSTLKNG GMLITSVVLSYFGYIIAYLGLRKISSQQIAHYFPLMSNIRAPSTKNVLSSKIKTQGNEELTITHPIYYKETVKVHRLQSQ ETRSVQQQPYQTQKIPSPQPTKQVLPSTLSQSYTPTSMPQSQTTFVINGNGILKSDGTVYLNIYVSQPCVISSVKIENLP YSPLSIQPQSLQIGNNQVLIKFDKVALLGLLKGKEYKLYLTLRTYNIYYPDQVIKIKYETT >Mature_380_residues SSSAIKYLSLGMLIIILSLPLAVIIWYISLLFGITPPMNVTINGFLLSIFSPMILSGAFLGIINMASFYRIRIGLRVLNL DHNTTLGALLNVIASIFLFTGNLLVLLSALVSVINIITILAWISAEILTLIFYISGNIFLGIGLMRLGELMKNSTLKNGG MLITSVVLSYFGYIIAYLGLRKISSQQIAHYFPLMSNIRAPSTKNVLSSKIKTQGNEELTITHPIYYKETVKVHRLQSQE TRSVQQQPYQTQKIPSPQPTKQVLPSTLSQSYTPTSMPQSQTTFVINGNGILKSDGTVYLNIYVSQPCVISSVKIENLPY SPLSIQPQSLQIGNNQVLIKFDKVALLGLLKGKEYKLYLTLRTYNIYYPDQVIKIKYETT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42417; Mature: 42286
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSAIKYLSLGMLIIILSLPLAVIIWYISLLFGITPPMNVTINGFLLSIFSPMILSGAF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHH LGIINMASFYRIRIGLRVLNLDHNTTLGALLNVIASIFLFTGNLLVLLSALVSVINIITI HHHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LAWISAEILTLIFYISGNIFLGIGLMRLGELMKNSTLKNGGMLITSVVLSYFGYIIAYLG HHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH LRKISSQQIAHYFPLMSNIRAPSTKNVLSSKIKTQGNEELTITHPIYYKETVKVHRLQSQ HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCEEEHHHHHHHHHHHH ETRSVQQQPYQTQKIPSPQPTKQVLPSTLSQSYTPTSMPQSQTTFVINGNGILKSDGTVY HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCEEEECCCEEE LNIYVSQPCVISSVKIENLPYSPLSIQPQSLQIGNNQVLIKFDKVALLGLLKGKEYKLYL EEEEECCCEEEEEEEECCCCCCCCCCCCCCEEECCCEEEEEEHHHHHHHHHCCCCEEEEE TLRTYNIYYPDQVIKIKYETT EEEEEEEECCCEEEEEEEECC >Mature Secondary Structure SSSAIKYLSLGMLIIILSLPLAVIIWYISLLFGITPPMNVTINGFLLSIFSPMILSGAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHH LGIINMASFYRIRIGLRVLNLDHNTTLGALLNVIASIFLFTGNLLVLLSALVSVINIITI HHHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LAWISAEILTLIFYISGNIFLGIGLMRLGELMKNSTLKNGGMLITSVVLSYFGYIIAYLG HHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH LRKISSQQIAHYFPLMSNIRAPSTKNVLSSKIKTQGNEELTITHPIYYKETVKVHRLQSQ HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEECCEEEHHHHHHHHHHHH ETRSVQQQPYQTQKIPSPQPTKQVLPSTLSQSYTPTSMPQSQTTFVINGNGILKSDGTVY HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCEEEECCCEEE LNIYVSQPCVISSVKIENLPYSPLSIQPQSLQIGNNQVLIKFDKVALLGLLKGKEYKLYL EEEEECCCEEEEEEEECCCCCCCCCCCCCCEEECCCEEEEEEHHHHHHHHHCCCCEEEEE TLRTYNIYYPDQVIKIKYETT EEEEEEEECCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA