| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15921836
Identifier: 15921836
GI number: 15921836
Start: 1536416
End: 1536922
Strand: Reverse
Name: 15921836
Synonym: ST1542
Alternate gene names: NA
Gene position: 1536922-1536416 (Counterclockwise)
Preceding gene: 15921837
Following gene: 15921835
Centisome position: 57.03
GC content: 31.76
Gene sequence:
>507_bases ATGTCAAAGTTAATAGGTGAGAGAATTTCGCAAGTTAAAAGAAATATAGTATTTGAAAGAAGGACACTATTTTTAGCTTA TGTTACTGATTTAGCGGATCAAGTTGAGAACTATGTTAAACCTTCATTAGACTCTGGTTTTATTGCATTAGCTGATGGCT ACATATTAACCCTAATGTCATGGGGACTAGTAAGAGGATTAGAGAAAGATTGGATGAATGATGTTTTGTCTATTTTTCCT AGATCTGCAATATACTTTTCCCTTATCTCAAGACCAGAAGAAATCATAAAGAGAATAATAAAGAAAAGAGGATTCTTAGA CCCTCTTAGTGCGGGAATAGATATTTGTATAAAAAGCGATGTGTTTACAGCTTATGAAGATTATATTAATGAATTTCAGA AAGTTCTTATTTCTCTCTCTACAAAGGAAAGTATTATTTACACGGATAGGAATTTTGATGAAGTACATAAGGAGATAGTG AATAAAATTGAAAGCCTTACGTCCTGA
Upstream 100 bases:
>100_bases TTTTGAAGGAATTGAGGGATCTGGTAGGACAGCCCATTTAGAGGCTGTTAAACGTTACCTAGAAAAAGAAGGTTATGGTA CAGTAACTTTTGGATTACAG
Downstream 100 bases:
>100_bases AGAATATGCAAACATTAATCTTAAAGAAGTACTAGGAAGAACTAAAATTGATGAAGAGAGTATTCATGACGCTAGAGTTA GCTTAAGAAAGTACTATGAC
Product: hypothetical protein
Products: ADP; dTDP
Alternate protein names: Thymidylate Kinase-Like Protein; Thymidylate Kinase Related Protein
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSKLIGERISQVKRNIVFERRTLFLAYVTDLADQVENYVKPSLDSGFIALADGYILTLMSWGLVRGLEKDWMNDVLSIFP RSAIYFSLISRPEEIIKRIIKKRGFLDPLSAGIDICIKSDVFTAYEDYINEFQKVLISLSTKESIIYTDRNFDEVHKEIV NKIESLTS
Sequences:
>Translated_168_residues MSKLIGERISQVKRNIVFERRTLFLAYVTDLADQVENYVKPSLDSGFIALADGYILTLMSWGLVRGLEKDWMNDVLSIFP RSAIYFSLISRPEEIIKRIIKKRGFLDPLSAGIDICIKSDVFTAYEDYINEFQKVLISLSTKESIIYTDRNFDEVHKEIV NKIESLTS >Mature_167_residues SKLIGERISQVKRNIVFERRTLFLAYVTDLADQVENYVKPSLDSGFIALADGYILTLMSWGLVRGLEKDWMNDVLSIFPR SAIYFSLISRPEEIIKRIIKKRGFLDPLSAGIDICIKSDVFTAYEDYINEFQKVLISLSTKESIIYTDRNFDEVHKEIVN KIESLTS
Specific function: Unknown
COG id: COG0125
COG function: function code F; Thymidylate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.4.9
Molecular weight: Translated: 19368; Mature: 19236
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLIGERISQVKRNIVFERRTLFLAYVTDLADQVENYVKPSLDSGFIALADGYILTLMS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH WGLVRGLEKDWMNDVLSIFPRSAIYFSLISRPEEIIKRIIKKRGFLDPLSAGIDICIKSD HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHCHHHHHHHH VFTAYEDYINEFQKVLISLSTKESIIYTDRNFDEVHKEIVNKIESLTS HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKLIGERISQVKRNIVFERRTLFLAYVTDLADQVENYVKPSLDSGFIALADGYILTLMS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH WGLVRGLEKDWMNDVLSIFPRSAIYFSLISRPEEIIKRIIKKRGFLDPLSAGIDICIKSD HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHCHHHHHHHH VFTAYEDYINEFQKVLISLSTKESIIYTDRNFDEVHKEIVNKIESLTS HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; dTMP
Specific reaction: ATP + dTMP = ADP + dTDP
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA