| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15921802
Identifier: 15921802
GI number: 15921802
Start: 1506522
End: 1507085
Strand: Reverse
Name: 15921802
Synonym: ST1508
Alternate gene names: NA
Gene position: 1507085-1506522 (Counterclockwise)
Preceding gene: 15921803
Following gene: 15921800
Centisome position: 55.93
GC content: 33.16
Gene sequence:
>564_bases ATGTCTAAAACCCTTCAACGAATCGATAAACAGTCTGAAATAATAAAGGATAAAGCTAAAGAAATAATAAAGGAAATTGA AAATGAAACTGAGGATCTTAAAATAGTTGCCTTTATGGAACATACTACACCACCACCACAAGTAAGCCCTAAAGTAATAA AGTTTAATAAAATTTTGGAATTATTGAGGTTATTAGCTATAGATAATCCTATCGAAAAAGGAGTGGCAAAAGTTATGTTA TACTCACCTAGTACTGGAAGATCTAGAGGATTAACACCTACTATGATGCCAGGCTTTCAATATCTGTCCCCAAATGCTAA AACTAAACCTCATTCACATAACATGGCCTCAATATACCTAGTAGTTAAAGGAAAAGGCTATTCAGTAGTTGGGGGTAAGA AGTTAGATTGGGAAGAAGGAGACGTATTTGTAGTTCCAGCAAATATGGTTCACTATCACGTTAATGTTTCAGAAACAGAA GAGGCAATACTATTTGACGTTACAGATTCTGGATTATTAGAAAATTTAGGAATCTTAGAATTTAAAGAAGAAGAAGAGGA ATAA
Upstream 100 bases:
>100_bases TTATTCTACCACATATTTCCACACATTTTTTTCCTTCAAATATCACATAACATTTCATTCTAACCACAACCCTTTTAAAT TACTTATATAATTTATACAT
Downstream 100 bases:
>100_bases AATATTAAATCTTTCCTCTTAATAATTTTATTAAAGATATTAATTTTTCGTCTCTCCATCTAGATAGTTCTTGAAATGTT TTGCTCTTTACAAATTCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MSKTLQRIDKQSEIIKDKAKEIIKEIENETEDLKIVAFMEHTTPPPQVSPKVIKFNKILELLRLLAIDNPIEKGVAKVML YSPSTGRSRGLTPTMMPGFQYLSPNAKTKPHSHNMASIYLVVKGKGYSVVGGKKLDWEEGDVFVVPANMVHYHVNVSETE EAILFDVTDSGLLENLGILEFKEEEEE
Sequences:
>Translated_187_residues MSKTLQRIDKQSEIIKDKAKEIIKEIENETEDLKIVAFMEHTTPPPQVSPKVIKFNKILELLRLLAIDNPIEKGVAKVML YSPSTGRSRGLTPTMMPGFQYLSPNAKTKPHSHNMASIYLVVKGKGYSVVGGKKLDWEEGDVFVVPANMVHYHVNVSETE EAILFDVTDSGLLENLGILEFKEEEEE >Mature_186_residues SKTLQRIDKQSEIIKDKAKEIIKEIENETEDLKIVAFMEHTTPPPQVSPKVIKFNKILELLRLLAIDNPIEKGVAKVMLY SPSTGRSRGLTPTMMPGFQYLSPNAKTKPHSHNMASIYLVVKGKGYSVVGGKKLDWEEGDVFVVPANMVHYHVNVSETEE AILFDVTDSGLLENLGILEFKEEEEE
Specific function: Unknown
COG id: COG3435
COG function: function code Q; Gentisate 1,2-dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21040; Mature: 20908
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTLQRIDKQSEIIKDKAKEIIKEIENETEDLKIVAFMEHTTPPPQVSPKVIKFNKILE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCEEHHHHHHH LLRLLAIDNPIEKGVAKVMLYSPSTGRSRGLTPTMMPGFQYLSPNAKTKPHSHNMASIYL HHHHHHCCCHHHHHHEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEE VVKGKGYSVVGGKKLDWEEGDVFVVPANMVHYHVNVSETEEAILFDVTDSGLLENLGILE EEECCCEEEECCCCCCCCCCCEEEEECCEEEEEEECCCCCCEEEEEECCCCHHHHCCCEE FKEEEEE ECCCCCC >Mature Secondary Structure SKTLQRIDKQSEIIKDKAKEIIKEIENETEDLKIVAFMEHTTPPPQVSPKVIKFNKILE CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCEEHHHHHHH LLRLLAIDNPIEKGVAKVMLYSPSTGRSRGLTPTMMPGFQYLSPNAKTKPHSHNMASIYL HHHHHHCCCHHHHHHEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEE VVKGKGYSVVGGKKLDWEEGDVFVVPANMVHYHVNVSETEEAILFDVTDSGLLENLGILE EEECCCEEEECCCCCCCCCCCEEEEECCEEEEEEECCCCCCEEEEEECCCCHHHHCCCEE FKEEEEE ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA