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The map label for this gene is atpD

Identifier: 15921727

GI number: 15921727

Start: 1443233

End: 1443883

Strand: Direct

Name: atpD

Synonym: ST1438

Alternate gene names: 15921727

Gene position: 1443233-1443883 (Clockwise)

Preceding gene: 15921726

Following gene: 15921728

Centisome position: 53.56

GC content: 30.57

Gene sequence:

>651_bases
ATGAGCTCTAGAAAAATTCTACCTACAAAACTTAATTTGATTAATTTAAGAAAACAAATAAGATTAACTAGAACTATAAA
GAGATTACTGGAAAACAAAAGAGAAGTCCTTTTGATATATTTAAGAGAATATGCTAATGAGTATGAGAAACTTTATTCAG
AAGTTAGTCAATTGCTCAAAGAGGTCTATGAAACATATTTAATGGGTGTAAGTGCAGAAGGGATATCTACAGTTGAATCT
TATGCTAACTCAGTTCCTCCATCTTTGCAAGTAAAAAGTGATCTTAAGGTTCTTTTTGGAGTAAGAATACCTATAGTTAA
ACTTGATGAAAATTCTATACAACCTCAACCTTTTGGTGATATAGAAGTTTCACCCTATATAACTAAATCAAGAGATGCGA
TTGCCGAAGCATTTAAGAAAATATTAGAGCTAGTTGAAATGGAATCTGCAATTAGGTCATTATCTACTGAGTTAAGAAAA
ACTCAGAGACTAATTAATGCAATAGATTCTTATATACTTCCATATTATACTTCTTCTGCTAAATATATTAAAGGGGTTCT
TGATGATAGAACAAGAGAAGAATTTGTTAGACTTAAGATGATAAGAAAAGTCCTCCAAAGGAGGAGAGGGGAAAATGTCG
GAAATAGATAA

Upstream 100 bases:

>100_bases
ATATAGGTTGGGAAGTATTATCTATATTACCAGAGTCAGAACTTTCACTTATAAGGTCAGAATATATTAAGAAATATCAT
CCTAATTACCGTGGTAAGAA

Downstream 100 bases:

>100_bases
ATCCACAATTGATAAATATATAAATATTTTGAAATCAAAACTTGATCAGAAGAAAAATGAATTACTTTCAAAAATAAATA
TGGAATATGAAAAAACACTG

Product: V-type ATP synthase subunit D

Products: ADP; phosphate; H+

Alternate protein names: Sul-ATPase gamma chain; V-ATPase subunit D

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSSRKILPTKLNLINLRKQIRLTRTIKRLLENKREVLLIYLREYANEYEKLYSEVSQLLKEVYETYLMGVSAEGISTVES
YANSVPPSLQVKSDLKVLFGVRIPIVKLDENSIQPQPFGDIEVSPYITKSRDAIAEAFKKILELVEMESAIRSLSTELRK
TQRLINAIDSYILPYYTSSAKYIKGVLDDRTREEFVRLKMIRKVLQRRRGENVGNR

Sequences:

>Translated_216_residues
MSSRKILPTKLNLINLRKQIRLTRTIKRLLENKREVLLIYLREYANEYEKLYSEVSQLLKEVYETYLMGVSAEGISTVES
YANSVPPSLQVKSDLKVLFGVRIPIVKLDENSIQPQPFGDIEVSPYITKSRDAIAEAFKKILELVEMESAIRSLSTELRK
TQRLINAIDSYILPYYTSSAKYIKGVLDDRTREEFVRLKMIRKVLQRRRGENVGNR
>Mature_215_residues
SSRKILPTKLNLINLRKQIRLTRTIKRLLENKREVLLIYLREYANEYEKLYSEVSQLLKEVYETYLMGVSAEGISTVESY
ANSVPPSLQVKSDLKVLFGVRIPIVKLDENSIQPQPFGDIEVSPYITKSRDAIAEAFKKILELVEMESAIRSLSTELRKT
QRLINAIDSYILPYYTSSAKYIKGVLDDRTREEFVRLKMIRKVLQRRRGENVGNR

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG1394

COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the V-ATPase D subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): VATD_SULTO (P62017)

Other databases:

- EMBL:   M57238
- EMBL:   BA000023
- PIR:   B36493
- RefSeq:   NP_377396.1
- GeneID:   1459469
- GenomeReviews:   BA000023_GR
- KEGG:   sto:ST1438
- NMPDR:   fig|273063.1.peg.1564
- HOGENOM:   HBG297550
- OMA:   EDARNST
- ProtClustDB:   PRK00373
- BioCyc:   STOK273063:ST1438-MONOMER
- BRENDA:   3.6.3.14
- HAMAP:   MF_00271
- InterPro:   IPR002699
- PANTHER:   PTHR11671
- TIGRFAMs:   TIGR00309

Pfam domain/function: PF01813 ATP-synt_D

EC number: 3.6.3.14

Molecular weight: Translated: 25106; Mature: 24974

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRKILPTKLNLINLRKQIRLTRTIKRLLENKREVLLIYLREYANEYEKLYSEVSQLLK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVYETYLMGVSAEGISTVESYANSVPPSLQVKSDLKVLFGVRIPIVKLDENSIQPQPFGD
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
IEVSPYITKSRDAIAEAFKKILELVEMESAIRSLSTELRKTQRLINAIDSYILPYYTSSA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KYIKGVLDDRTREEFVRLKMIRKVLQRRRGENVGNR
HHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SSRKILPTKLNLINLRKQIRLTRTIKRLLENKREVLLIYLREYANEYEKLYSEVSQLLK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVYETYLMGVSAEGISTVESYANSVPPSLQVKSDLKVLFGVRIPIVKLDENSIQPQPFGD
HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCC
IEVSPYITKSRDAIAEAFKKILELVEMESAIRSLSTELRKTQRLINAIDSYILPYYTSSA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KYIKGVLDDRTREEFVRLKMIRKVLQRRRGENVGNR
HHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2147683; 11572479