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The map label for this gene is yjiR [C]

Identifier: 15921700

GI number: 15921700

Start: 1415197

End: 1416399

Strand: Reverse

Name: yjiR [C]

Synonym: ST1411

Alternate gene names: 15921700

Gene position: 1416399-1415197 (Counterclockwise)

Preceding gene: 15921703

Following gene: 15921698

Centisome position: 52.56

GC content: 34.33

Gene sequence:

>1203_bases
ATGTTCGAAAGATTTCTTTCAAAAGACGTATCAAATTTAAGGTCGTCAGAAATTAGAGATTTATTAAAACTGACTGAAGG
AAAAAAAGTTATTAGTTTAGCTGGCGGTTTACCAGATCCTACTACTTTTCCCGTTGAAGAGATTAGAAAAATAACTGACG
ATGTACTCAGAGAAAAATCTGATAGAGCCCTACAATATTCAACAACGTCTGGGATAACTGAGTTCAAAAAAGAGCTTGTT
AACCTATCAAGATACAGAGGAATAAGCGGTATAAATGAAAATAATACATTCGTAACTGTAGGAAGCCAAGAAGCCTTATT
TATGATATTTAATCTCCTAGTAGATCCAGGAGATACTGTAATCGTGGAAATGCCCACATATCTTGCTGCACTTAATATTC
TTAGAGCAAGAAAACCCAATTTCATTGGCGTCCATCTTACACAAAATGGTCCAGACCTTGATGAATTAGAGAGAAAAGTA
AAAGAGAGCATAAGTAATGGCAAAAAACCGAAGCTAATGTATGTTATACCTACAGCTCAAAACCCTGGAGGAACAACAAT
GAGTTTAGATGATAGGAAAAGACTTCTTGAAATAGCTCAAAAATACGACTTTTTACTTATAGAAGATGATGCTTATGGCT
TTTTAGTTTTTGACGGAGAAGCACCACCACCACTTATAAGTTTAGATAAAGAAGGAAGAGTAATATATACATCTACATTC
AGTAAAATTTTAGCTCCAGGTTTAAGATTAGGATGGGTTATAGCACAAGAAGAGTTTATTAGAGAAATGGAGTTATACAA
GCAGAATATAGATTTGCATACTCCTACACTTACTCAAATGATAGCAATGGAGGCAATAAAGAGAGGAGTTATACAAAATC
AGTTACCATTGATTAGAAGAGTATATAGAGAAAAAAGAGATGTAATGCTAGCAGCAATAGAGAAATACTTCCCGAAAGAA
GCTACGTGGAGCAGACCAGTTGGAGGAATGTTTGTTTTTGCCTGGTTACCAGAAAAAATAGATACAGTAAAGATGTTAGA
GGAAAGCATGAGAAGAGGAGTAGCCTATGTTCCTGGATCTAGTTTCTACCATGATTATTCTGGGAGAAATACTATGAGAT
TAAACTTCAGCTATCCTACTAAGCAAGAACTAGAAGAAGGTATTAAAATCCTAGGAAATACTATATTAGATTTTCTTAAA
TAA

Upstream 100 bases:

>100_bases
CTTCCAGTAAGAATCTCATTTCCAATGTTTATTATCTCAGCGTACCAAATCTCCACAATAATAGATAAAAACTTTTAAGT
ATATATAGGGTTGTGAAAGC

Downstream 100 bases:

>100_bases
TTTTTCGATATTAATTATAATCCCGGGTTTTGACGTAGGAATTGAAGAGAATAGATCGTCAGATACCCCAATAAGCTCAT
TAAATAATTTATCACTAATT

Product: kynurenine/alpha-aminoadipate aminotransferase

Products: NA

Alternate protein names: AspB-1 [H]

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MFERFLSKDVSNLRSSEIRDLLKLTEGKKVISLAGGLPDPTTFPVEEIRKITDDVLREKSDRALQYSTTSGITEFKKELV
NLSRYRGISGINENNTFVTVGSQEALFMIFNLLVDPGDTVIVEMPTYLAALNILRARKPNFIGVHLTQNGPDLDELERKV
KESISNGKKPKLMYVIPTAQNPGGTTMSLDDRKRLLEIAQKYDFLLIEDDAYGFLVFDGEAPPPLISLDKEGRVIYTSTF
SKILAPGLRLGWVIAQEEFIREMELYKQNIDLHTPTLTQMIAMEAIKRGVIQNQLPLIRRVYREKRDVMLAAIEKYFPKE
ATWSRPVGGMFVFAWLPEKIDTVKMLEESMRRGVAYVPGSSFYHDYSGRNTMRLNFSYPTKQELEEGIKILGNTILDFLK

Sequences:

>Translated_400_residues
MFERFLSKDVSNLRSSEIRDLLKLTEGKKVISLAGGLPDPTTFPVEEIRKITDDVLREKSDRALQYSTTSGITEFKKELV
NLSRYRGISGINENNTFVTVGSQEALFMIFNLLVDPGDTVIVEMPTYLAALNILRARKPNFIGVHLTQNGPDLDELERKV
KESISNGKKPKLMYVIPTAQNPGGTTMSLDDRKRLLEIAQKYDFLLIEDDAYGFLVFDGEAPPPLISLDKEGRVIYTSTF
SKILAPGLRLGWVIAQEEFIREMELYKQNIDLHTPTLTQMIAMEAIKRGVIQNQLPLIRRVYREKRDVMLAAIEKYFPKE
ATWSRPVGGMFVFAWLPEKIDTVKMLEESMRRGVAYVPGSSFYHDYSGRNTMRLNFSYPTKQELEEGIKILGNTILDFLK
>Mature_400_residues
MFERFLSKDVSNLRSSEIRDLLKLTEGKKVISLAGGLPDPTTFPVEEIRKITDDVLREKSDRALQYSTTSGITEFKKELV
NLSRYRGISGINENNTFVTVGSQEALFMIFNLLVDPGDTVIVEMPTYLAALNILRARKPNFIGVHLTQNGPDLDELERKV
KESISNGKKPKLMYVIPTAQNPGGTTMSLDDRKRLLEIAQKYDFLLIEDDAYGFLVFDGEAPPPLISLDKEGRVIYTSTF
SKILAPGLRLGWVIAQEEFIREMELYKQNIDLHTPTLTQMIAMEAIKRGVIQNQLPLIRRVYREKRDVMLAAIEKYFPKE
ATWSRPVGGMFVFAWLPEKIDTVKMLEESMRRGVAYVPGSSFYHDYSGRNTMRLNFSYPTKQELEEGIKILGNTILDFLK

Specific function: Unknown

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI7705897, Length=429, Percent_Identity=33.3333333333333, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI33469970, Length=429, Percent_Identity=33.3333333333333, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI95147551, Length=286, Percent_Identity=26.9230769230769, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI169881279, Length=286, Percent_Identity=26.9230769230769, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI56713256, Length=351, Percent_Identity=27.6353276353276, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI56713254, Length=353, Percent_Identity=27.7620396600567, Blast_Score=77, Evalue=4e-14,
Organism=Escherichia coli, GI1790797, Length=394, Percent_Identity=26.1421319796954, Blast_Score=157, Evalue=9e-40,
Organism=Escherichia coli, GI1787710, Length=383, Percent_Identity=26.3707571801567, Blast_Score=152, Evalue=5e-38,
Organism=Escherichia coli, GI1788722, Length=327, Percent_Identity=26.9113149847095, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI48994949, Length=393, Percent_Identity=24.4274809160305, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1788627, Length=233, Percent_Identity=23.175965665236, Blast_Score=66, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17567369, Length=305, Percent_Identity=26.5573770491803, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71994472, Length=281, Percent_Identity=24.9110320284698, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71994476, Length=281, Percent_Identity=24.9110320284698, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6321236, Length=487, Percent_Identity=24.8459958932238, Blast_Score=133, Evalue=4e-32,
Organism=Saccharomyces cerevisiae, GI6321929, Length=498, Percent_Identity=26.7068273092369, Blast_Score=125, Evalue=1e-29,
Organism=Saccharomyces cerevisiae, GI6321000, Length=243, Percent_Identity=30.8641975308642, Blast_Score=113, Evalue=5e-26,
Organism=Drosophila melanogaster, GI21356535, Length=423, Percent_Identity=26.9503546099291, Blast_Score=141, Evalue=7e-34,
Organism=Drosophila melanogaster, GI28573069, Length=412, Percent_Identity=25.2427184466019, Blast_Score=85, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24646114, Length=412, Percent_Identity=25.2427184466019, Blast_Score=85, Evalue=8e-17,
Organism=Drosophila melanogaster, GI28573067, Length=412, Percent_Identity=25.2427184466019, Blast_Score=85, Evalue=8e-17,
Organism=Drosophila melanogaster, GI28573065, Length=412, Percent_Identity=25.2427184466019, Blast_Score=85, Evalue=8e-17,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: NA

Molecular weight: Translated: 45593; Mature: 45593

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFERFLSKDVSNLRSSEIRDLLKLTEGKKVISLAGGLPDPTTFPVEEIRKITDDVLREKS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC
DRALQYSTTSGITEFKKELVNLSRYRGISGINENNTFVTVGSQEALFMIFNLLVDPGDTV
CCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCEE
IVEMPTYLAALNILRARKPNFIGVHLTQNGPDLDELERKVKESISNGKKPKLMYVIPTAQ
EEECHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCC
NPGGTTMSLDDRKRLLEIAQKYDFLLIEDDAYGFLVFDGEAPPPLISLDKEGRVIYTSTF
CCCCCEECHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCCEEEECCCCCEEEECHH
SKILAPGLRLGWVIAQEEFIREMELYKQNIDLHTPTLTQMIAMEAIKRGVIQNQLPLIRR
HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
VYREKRDVMLAAIEKYFPKEATWSRPVGGMFVFAWLPEKIDTVKMLEESMRRGVAYVPGS
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCEEECCCC
SFYHDYSGRNTMRLNFSYPTKQELEEGIKILGNTILDFLK
CCEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MFERFLSKDVSNLRSSEIRDLLKLTEGKKVISLAGGLPDPTTFPVEEIRKITDDVLREKS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC
DRALQYSTTSGITEFKKELVNLSRYRGISGINENNTFVTVGSQEALFMIFNLLVDPGDTV
CCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCEE
IVEMPTYLAALNILRARKPNFIGVHLTQNGPDLDELERKVKESISNGKKPKLMYVIPTAQ
EEECHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCC
NPGGTTMSLDDRKRLLEIAQKYDFLLIEDDAYGFLVFDGEAPPPLISLDKEGRVIYTSTF
CCCCCEECHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCCEEEECCCCCEEEECHH
SKILAPGLRLGWVIAQEEFIREMELYKQNIDLHTPTLTQMIAMEAIKRGVIQNQLPLIRR
HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
VYREKRDVMLAAIEKYFPKEATWSRPVGGMFVFAWLPEKIDTVKMLEESMRRGVAYVPGS
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCEEECCCC
SFYHDYSGRNTMRLNFSYPTKQELEEGIKILGNTILDFLK
CCEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8899719; 11427726 [H]