| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15921611
Identifier: 15921611
GI number: 15921611
Start: 1341549
End: 1342595
Strand: Reverse
Name: 15921611
Synonym: ST1330
Alternate gene names: NA
Gene position: 1342595-1341549 (Counterclockwise)
Preceding gene: 15921612
Following gene: 15921609
Centisome position: 49.82
GC content: 38.3
Gene sequence:
>1047_bases ATGTTATTCATTAAGTTTTATTATTTTATAATGATAAAAACTGTTATGAAACCTTGCATTAACCTCTTAGAATGCATAGA CTCCGGTGTAAGAGCGGTAAAGATTGCTGTAGCTTACGTTAAGAGATCAGGTGTTAATAGGTTCAGCGAATTTTTACAGA ATACTAAGGAATGTCTAATAATAACCTCTCTAGACTTCGGAATAACAGAACTTGAGGGGCTCAAGGAGTTGAAAAGATTG GGATGTAATGTTTACCTATACAACGGCGGTAATGAATTCCACCCCAAGGTCTACATACTCGATTACGGATATAAGAAAAT CGCCGTAATAGGTTCCTCAAATTTAAGTGAAGGCGCAATTACCGGTAAGAATATTGAATTTAATCTAATAGTTGAAGAAG ATGAAATAGTGAGGGAAGCAGAGGTCCTCATTAACAAACTCCTTTCCGAGTCGGATCCTGTCACTGACGACCTCATATCT CAGCTGGAGAAAAACGGGTACGAGAAGATCAGAAGAGCGGTATACGATAAACCGGGAAAGGTTATACTTTCTATATTGAG AAATAGGCAAAGGTATTGCGAGGAGTTCGTCAAGCTGTATAACGAAATTAGGCAACACAAAGAGAGGGGGAAGATGGCGG GCTTAAGGAAGAAGAGCCATGAAATGGGGATAAATAAGGTCGCATGCGATTTAATATCAAAAGGAATAGATGTAGGGGAC GAAGTCGGGTCAGACATAACCGTATATGCGGGAAAGTCGAAAATAAGGATCAAAGTCCAGGGTATGGTTCTGCCCAATAA TCCTGCAAGAGTATATGATCTCGATTTTGACTATTTCATAATAGTAGTGGTGACGGATCTGAATAGTGCGGACTATTTTA TTATTGAAAGAAATGAGGTAGAGAGACTGATTAAAGAAGGTCTAATAAAATACAAAAAGGGATCGGAAAAGTACGGCTGG ATACCGAGAAAGGTTTACGAGAAATACAAGATAGATTTAGACGATTTAGTAAATAAATTGAGAGAAGCCAAATTAAGCCG AGCTTAA
Upstream 100 bases:
>100_bases ATTATAAAATAATTATAACATTAATTTTTATTTCAGATTTTATTACTTTCATCTTAACGATAAGTACTTACTAGGACAGT AAACCTCGGAGGAGTACTAT
Downstream 100 bases:
>100_bases AAAAGAAGAGATTTAAAGTAAAATCCAGAAAAAGAGAGTAAAGACGAGGAAGGGGGACTAAGGAATTATTTGAGTAATAA GTAAGACAGAGTTAGGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MLFIKFYYFIMIKTVMKPCINLLECIDSGVRAVKIAVAYVKRSGVNRFSEFLQNTKECLIITSLDFGITELEGLKELKRL GCNVYLYNGGNEFHPKVYILDYGYKKIAVIGSSNLSEGAITGKNIEFNLIVEEDEIVREAEVLINKLLSESDPVTDDLIS QLEKNGYEKIRRAVYDKPGKVILSILRNRQRYCEEFVKLYNEIRQHKERGKMAGLRKKSHEMGINKVACDLISKGIDVGD EVGSDITVYAGKSKIRIKVQGMVLPNNPARVYDLDFDYFIIVVVTDLNSADYFIIERNEVERLIKEGLIKYKKGSEKYGW IPRKVYEKYKIDLDDLVNKLREAKLSRA
Sequences:
>Translated_348_residues MLFIKFYYFIMIKTVMKPCINLLECIDSGVRAVKIAVAYVKRSGVNRFSEFLQNTKECLIITSLDFGITELEGLKELKRL GCNVYLYNGGNEFHPKVYILDYGYKKIAVIGSSNLSEGAITGKNIEFNLIVEEDEIVREAEVLINKLLSESDPVTDDLIS QLEKNGYEKIRRAVYDKPGKVILSILRNRQRYCEEFVKLYNEIRQHKERGKMAGLRKKSHEMGINKVACDLISKGIDVGD EVGSDITVYAGKSKIRIKVQGMVLPNNPARVYDLDFDYFIIVVVTDLNSADYFIIERNEVERLIKEGLIKYKKGSEKYGW IPRKVYEKYKIDLDDLVNKLREAKLSRA >Mature_348_residues MLFIKFYYFIMIKTVMKPCINLLECIDSGVRAVKIAVAYVKRSGVNRFSEFLQNTKECLIITSLDFGITELEGLKELKRL GCNVYLYNGGNEFHPKVYILDYGYKKIAVIGSSNLSEGAITGKNIEFNLIVEEDEIVREAEVLINKLLSESDPVTDDLIS QLEKNGYEKIRRAVYDKPGKVILSILRNRQRYCEEFVKLYNEIRQHKERGKMAGLRKKSHEMGINKVACDLISKGIDVGD EVGSDITVYAGKSKIRIKVQGMVLPNNPARVYDLDFDYFIIVVVTDLNSADYFIIERNEVERLIKEGLIKYKKGSEKYGW IPRKVYEKYKIDLDDLVNKLREAKLSRA
Specific function: Unknown
COG id: COG3886
COG function: function code L; Predicted HKD family nuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40005; Mature: 40005
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFIKFYYFIMIKTVMKPCINLLECIDSGVRAVKIAVAYVKRSGVNRFSEFLQNTKECLI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEE ITSLDFGITELEGLKELKRLGCNVYLYNGGNEFHPKVYILDYGYKKIAVIGSSNLSEGAI EEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCCCCCE TGKNIEFNLIVEEDEIVREAEVLINKLLSESDPVTDDLISQLEKNGYEKIRRAVYDKPGK ECCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCHH VILSILRNRQRYCEEFVKLYNEIRQHKERGKMAGLRKKSHEMGINKVACDLISKGIDVGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCH EVGSDITVYAGKSKIRIKVQGMVLPNNPARVYDLDFDYFIIVVVTDLNSADYFIIERNEV HCCCCEEEEECCCEEEEEEEEEEECCCCCEEEECCCCEEEEEEEEECCCCCEEEEEHHHH ERLIKEGLIKYKKGSEKYGWIPRKVYEKYKIDLDDLVNKLREAKLSRA HHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MLFIKFYYFIMIKTVMKPCINLLECIDSGVRAVKIAVAYVKRSGVNRFSEFLQNTKECLI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEE ITSLDFGITELEGLKELKRLGCNVYLYNGGNEFHPKVYILDYGYKKIAVIGSSNLSEGAI EEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCCCCCE TGKNIEFNLIVEEDEIVREAEVLINKLLSESDPVTDDLISQLEKNGYEKIRRAVYDKPGK ECCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCHH VILSILRNRQRYCEEFVKLYNEIRQHKERGKMAGLRKKSHEMGINKVACDLISKGIDVGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCH EVGSDITVYAGKSKIRIKVQGMVLPNNPARVYDLDFDYFIIVVVTDLNSADYFIIERNEV HCCCCEEEEECCCEEEEEEEEEEECCCCCEEEECCCCEEEEEEEEECCCCCEEEEEHHHH ERLIKEGLIKYKKGSEKYGWIPRKVYEKYKIDLDDLVNKLREAKLSRA HHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA