Definition Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession NC_003106
Length 2,694,756

Click here to switch to the map view.

The map label for this gene is 15921579

Identifier: 15921579

GI number: 15921579

Start: 1315290

End: 1316576

Strand: Reverse

Name: 15921579

Synonym: ST1308

Alternate gene names: NA

Gene position: 1316576-1315290 (Counterclockwise)

Preceding gene: 15921581

Following gene: 15921578

Centisome position: 48.86

GC content: 36.67

Gene sequence:

>1287_bases
ATGGCTAGGTTCATAGCTAGGACTAAACTGAATATTGATGATATTAAGGAAGTTGATGAATACAAAGCCCTTATTCCAGA
GAATAATCAGTATGAGGAATTGAAGAAGGCTATAAAAGAGCAGGGATTTCTGTTTCCAGTTATTGTAAATCAGAATAGAG
AACTGATAGATGGTTATACGAGGCTCAGAATTGCAAGAGAATTAGGATTAACAGAAATCCCAGCCGAGGTCTACGAGACA
GGCGGGAGAGAGGAAGAACTTGATATCATTGCAAGCCTGAACTTAAAGAGGAGGCACTTAACTAAGGACGAGCTAGTACT
ACTAATTGATAAGATTCATGAAATGAAAAAGAGACTGAAAAAAGATAATATAGAAGAGCAAAATTCTGGCACTGGTGCCA
GAATTTCAGCAATCGATAAAGAAAATATTTCAAAAAACTCCGTAACTGAAGAATCCAGGGAAATAAGGGAAGAATTGAAG
AAACTAGTACCAGATGTTCAGATAAATGAGGATACTATTAGAAAATATCTCCAGATCAAGAAAGAAGTACCATGGTTAGT
CCAGTATATTGGAGATGAGAAGAAGAACAAAATAGGCATCAGAAAGGCTTATGAGATATACACATTACTGAGTAAGAAGA
ACTTACTAGACCTGGATAAACGTATACCAAAAACAGAGCTTACTAAACTGATTACTGATAAAGAAGGTAGGAAAATCCTA
GAAAGAGACGATCTACTACAGCTGATTTTAGACCATAAGATGGCTGTTTCACAAGCGATAAACAAGCTGAAGACTGAGGA
AAAGATTAAGCAGTCTAAGAAGAAGTCCAGGGTAAAAACAGAAGATGAATACGCCGAAACTGATGAGGAAGAGGAAGATG
AGACTGAAGAAGGACAGAGAGAGTTAGATGAAAATGAAGAATATCCGCTTCTCGAGGAGTGGCAAAAAGCTAAGGAAGAA
GAAAAACAAGAGGCTGAACAACAGTTAACTCCCCAGTTAAATGTGTCTCCTAACTCTAACACTACGCAAGTAACATTAGA
ATTTTCTAATGTGTTAAAAGAACTATCTAATAAGGGATTTACGAAACTCGATTTCAACACCGACGTGGTTATAGCAAAAA
TAAACGATAAATATTACGCAATATTACTTGAAGCACTAAAGTCGTTGGAAAGGGGATCAAAACAGTATAAGGAATTAGCC
GAATTTCTAGTCTCTAACAATCTGGCAGTTTACGACCCAGAAGAAGATAACTACATCATTTCGTGGAGGTCCTTAAATTG
CAGTTAA

Upstream 100 bases:

>100_bases
GAGAAAAGAGGAAAATTAACGAAAACGATAACTTATGTAAAACTTTCCGATAAAGGTAAAGAATTTGTAAAAAATAAATT
GAAGGAGCTGTGACCGCATA

Downstream 100 bases:

>100_bases
GACAATGGCAGGCGGAGAAATTAGGCGAAGCAATTAATGCTTTAAAGCATGGCAAGACTCTTTTGCTTAACGCAAAGCCC
GGCTTAGGTAAGACGGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Nuclease

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MARFIARTKLNIDDIKEVDEYKALIPENNQYEELKKAIKEQGFLFPVIVNQNRELIDGYTRLRIARELGLTEIPAEVYET
GGREEELDIIASLNLKRRHLTKDELVLLIDKIHEMKKRLKKDNIEEQNSGTGARISAIDKENISKNSVTEESREIREELK
KLVPDVQINEDTIRKYLQIKKEVPWLVQYIGDEKKNKIGIRKAYEIYTLLSKKNLLDLDKRIPKTELTKLITDKEGRKIL
ERDDLLQLILDHKMAVSQAINKLKTEEKIKQSKKKSRVKTEDEYAETDEEEEDETEEGQRELDENEEYPLLEEWQKAKEE
EKQEAEQQLTPQLNVSPNSNTTQVTLEFSNVLKELSNKGFTKLDFNTDVVIAKINDKYYAILLEALKSLERGSKQYKELA
EFLVSNNLAVYDPEEDNYIISWRSLNCS

Sequences:

>Translated_428_residues
MARFIARTKLNIDDIKEVDEYKALIPENNQYEELKKAIKEQGFLFPVIVNQNRELIDGYTRLRIARELGLTEIPAEVYET
GGREEELDIIASLNLKRRHLTKDELVLLIDKIHEMKKRLKKDNIEEQNSGTGARISAIDKENISKNSVTEESREIREELK
KLVPDVQINEDTIRKYLQIKKEVPWLVQYIGDEKKNKIGIRKAYEIYTLLSKKNLLDLDKRIPKTELTKLITDKEGRKIL
ERDDLLQLILDHKMAVSQAINKLKTEEKIKQSKKKSRVKTEDEYAETDEEEEDETEEGQRELDENEEYPLLEEWQKAKEE
EKQEAEQQLTPQLNVSPNSNTTQVTLEFSNVLKELSNKGFTKLDFNTDVVIAKINDKYYAILLEALKSLERGSKQYKELA
EFLVSNNLAVYDPEEDNYIISWRSLNCS
>Mature_427_residues
ARFIARTKLNIDDIKEVDEYKALIPENNQYEELKKAIKEQGFLFPVIVNQNRELIDGYTRLRIARELGLTEIPAEVYETG
GREEELDIIASLNLKRRHLTKDELVLLIDKIHEMKKRLKKDNIEEQNSGTGARISAIDKENISKNSVTEESREIREELKK
LVPDVQINEDTIRKYLQIKKEVPWLVQYIGDEKKNKIGIRKAYEIYTLLSKKNLLDLDKRIPKTELTKLITDKEGRKILE
RDDLLQLILDHKMAVSQAINKLKTEEKIKQSKKKSRVKTEDEYAETDEEEEDETEEGQRELDENEEYPLLEEWQKAKEEE
KQEAEQQLTPQLNVSPNSNTTQVTLEFSNVLKELSNKGFTKLDFNTDVVIAKINDKYYAILLEALKSLERGSKQYKELAE
FLVSNNLAVYDPEEDNYIISWRSLNCS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50037; Mature: 49906

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARFIARTKLNIDDIKEVDEYKALIPENNQYEELKKAIKEQGFLFPVIVNQNRELIDGYT
CCCCHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHH
RLRIARELGLTEIPAEVYETGGREEELDIIASLNLKRRHLTKDELVLLIDKIHEMKKRLK
HHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHH
KDNIEEQNSGTGARISAIDKENISKNSVTEESREIREELKKLVPDVQINEDTIRKYLQIK
HCCCCCCCCCCCCEEEECCHHCCCCCCHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHH
KEVPWLVQYIGDEKKNKIGIRKAYEIYTLLSKKNLLDLDKRIPKTELTKLITDKEGRKIL
HCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCHHHHH
ERDDLLQLILDHKMAVSQAINKLKTEEKIKQSKKKSRVKTEDEYAETDEEEEDETEEGQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHH
ELDENEEYPLLEEWQKAKEEEKQEAEQQLTPQLNVSPNSNTTQVTLEFSNVLKELSNKGF
HCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEEHHHHHHHHHCCCC
TKLDFNTDVVIAKINDKYYAILLEALKSLERGSKQYKELAEFLVSNNLAVYDPEEDNYII
EEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEE
SWRSLNCS
EEECCCCC
>Mature Secondary Structure 
ARFIARTKLNIDDIKEVDEYKALIPENNQYEELKKAIKEQGFLFPVIVNQNRELIDGYT
CCCHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHH
RLRIARELGLTEIPAEVYETGGREEELDIIASLNLKRRHLTKDELVLLIDKIHEMKKRLK
HHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHH
KDNIEEQNSGTGARISAIDKENISKNSVTEESREIREELKKLVPDVQINEDTIRKYLQIK
HCCCCCCCCCCCCEEEECCHHCCCCCCHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHH
KEVPWLVQYIGDEKKNKIGIRKAYEIYTLLSKKNLLDLDKRIPKTELTKLITDKEGRKIL
HCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCHHHHH
ERDDLLQLILDHKMAVSQAINKLKTEEKIKQSKKKSRVKTEDEYAETDEEEEDETEEGQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHH
ELDENEEYPLLEEWQKAKEEEKQEAEQQLTPQLNVSPNSNTTQVTLEFSNVLKELSNKGF
HCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEEHHHHHHHHHCCCC
TKLDFNTDVVIAKINDKYYAILLEALKSLERGSKQYKELAEFLVSNNLAVYDPEEDNYII
EEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEE
SWRSLNCS
EEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA