| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15921579
Identifier: 15921579
GI number: 15921579
Start: 1315290
End: 1316576
Strand: Reverse
Name: 15921579
Synonym: ST1308
Alternate gene names: NA
Gene position: 1316576-1315290 (Counterclockwise)
Preceding gene: 15921581
Following gene: 15921578
Centisome position: 48.86
GC content: 36.67
Gene sequence:
>1287_bases ATGGCTAGGTTCATAGCTAGGACTAAACTGAATATTGATGATATTAAGGAAGTTGATGAATACAAAGCCCTTATTCCAGA GAATAATCAGTATGAGGAATTGAAGAAGGCTATAAAAGAGCAGGGATTTCTGTTTCCAGTTATTGTAAATCAGAATAGAG AACTGATAGATGGTTATACGAGGCTCAGAATTGCAAGAGAATTAGGATTAACAGAAATCCCAGCCGAGGTCTACGAGACA GGCGGGAGAGAGGAAGAACTTGATATCATTGCAAGCCTGAACTTAAAGAGGAGGCACTTAACTAAGGACGAGCTAGTACT ACTAATTGATAAGATTCATGAAATGAAAAAGAGACTGAAAAAAGATAATATAGAAGAGCAAAATTCTGGCACTGGTGCCA GAATTTCAGCAATCGATAAAGAAAATATTTCAAAAAACTCCGTAACTGAAGAATCCAGGGAAATAAGGGAAGAATTGAAG AAACTAGTACCAGATGTTCAGATAAATGAGGATACTATTAGAAAATATCTCCAGATCAAGAAAGAAGTACCATGGTTAGT CCAGTATATTGGAGATGAGAAGAAGAACAAAATAGGCATCAGAAAGGCTTATGAGATATACACATTACTGAGTAAGAAGA ACTTACTAGACCTGGATAAACGTATACCAAAAACAGAGCTTACTAAACTGATTACTGATAAAGAAGGTAGGAAAATCCTA GAAAGAGACGATCTACTACAGCTGATTTTAGACCATAAGATGGCTGTTTCACAAGCGATAAACAAGCTGAAGACTGAGGA AAAGATTAAGCAGTCTAAGAAGAAGTCCAGGGTAAAAACAGAAGATGAATACGCCGAAACTGATGAGGAAGAGGAAGATG AGACTGAAGAAGGACAGAGAGAGTTAGATGAAAATGAAGAATATCCGCTTCTCGAGGAGTGGCAAAAAGCTAAGGAAGAA GAAAAACAAGAGGCTGAACAACAGTTAACTCCCCAGTTAAATGTGTCTCCTAACTCTAACACTACGCAAGTAACATTAGA ATTTTCTAATGTGTTAAAAGAACTATCTAATAAGGGATTTACGAAACTCGATTTCAACACCGACGTGGTTATAGCAAAAA TAAACGATAAATATTACGCAATATTACTTGAAGCACTAAAGTCGTTGGAAAGGGGATCAAAACAGTATAAGGAATTAGCC GAATTTCTAGTCTCTAACAATCTGGCAGTTTACGACCCAGAAGAAGATAACTACATCATTTCGTGGAGGTCCTTAAATTG CAGTTAA
Upstream 100 bases:
>100_bases GAGAAAAGAGGAAAATTAACGAAAACGATAACTTATGTAAAACTTTCCGATAAAGGTAAAGAATTTGTAAAAAATAAATT GAAGGAGCTGTGACCGCATA
Downstream 100 bases:
>100_bases GACAATGGCAGGCGGAGAAATTAGGCGAAGCAATTAATGCTTTAAAGCATGGCAAGACTCTTTTGCTTAACGCAAAGCCC GGCTTAGGTAAGACGGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Nuclease
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MARFIARTKLNIDDIKEVDEYKALIPENNQYEELKKAIKEQGFLFPVIVNQNRELIDGYTRLRIARELGLTEIPAEVYET GGREEELDIIASLNLKRRHLTKDELVLLIDKIHEMKKRLKKDNIEEQNSGTGARISAIDKENISKNSVTEESREIREELK KLVPDVQINEDTIRKYLQIKKEVPWLVQYIGDEKKNKIGIRKAYEIYTLLSKKNLLDLDKRIPKTELTKLITDKEGRKIL ERDDLLQLILDHKMAVSQAINKLKTEEKIKQSKKKSRVKTEDEYAETDEEEEDETEEGQRELDENEEYPLLEEWQKAKEE EKQEAEQQLTPQLNVSPNSNTTQVTLEFSNVLKELSNKGFTKLDFNTDVVIAKINDKYYAILLEALKSLERGSKQYKELA EFLVSNNLAVYDPEEDNYIISWRSLNCS
Sequences:
>Translated_428_residues MARFIARTKLNIDDIKEVDEYKALIPENNQYEELKKAIKEQGFLFPVIVNQNRELIDGYTRLRIARELGLTEIPAEVYET GGREEELDIIASLNLKRRHLTKDELVLLIDKIHEMKKRLKKDNIEEQNSGTGARISAIDKENISKNSVTEESREIREELK KLVPDVQINEDTIRKYLQIKKEVPWLVQYIGDEKKNKIGIRKAYEIYTLLSKKNLLDLDKRIPKTELTKLITDKEGRKIL ERDDLLQLILDHKMAVSQAINKLKTEEKIKQSKKKSRVKTEDEYAETDEEEEDETEEGQRELDENEEYPLLEEWQKAKEE EKQEAEQQLTPQLNVSPNSNTTQVTLEFSNVLKELSNKGFTKLDFNTDVVIAKINDKYYAILLEALKSLERGSKQYKELA EFLVSNNLAVYDPEEDNYIISWRSLNCS >Mature_427_residues ARFIARTKLNIDDIKEVDEYKALIPENNQYEELKKAIKEQGFLFPVIVNQNRELIDGYTRLRIARELGLTEIPAEVYETG GREEELDIIASLNLKRRHLTKDELVLLIDKIHEMKKRLKKDNIEEQNSGTGARISAIDKENISKNSVTEESREIREELKK LVPDVQINEDTIRKYLQIKKEVPWLVQYIGDEKKNKIGIRKAYEIYTLLSKKNLLDLDKRIPKTELTKLITDKEGRKILE RDDLLQLILDHKMAVSQAINKLKTEEKIKQSKKKSRVKTEDEYAETDEEEEDETEEGQRELDENEEYPLLEEWQKAKEEE KQEAEQQLTPQLNVSPNSNTTQVTLEFSNVLKELSNKGFTKLDFNTDVVIAKINDKYYAILLEALKSLERGSKQYKELAE FLVSNNLAVYDPEEDNYIISWRSLNCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50037; Mature: 49906
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARFIARTKLNIDDIKEVDEYKALIPENNQYEELKKAIKEQGFLFPVIVNQNRELIDGYT CCCCHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHH RLRIARELGLTEIPAEVYETGGREEELDIIASLNLKRRHLTKDELVLLIDKIHEMKKRLK HHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHH KDNIEEQNSGTGARISAIDKENISKNSVTEESREIREELKKLVPDVQINEDTIRKYLQIK HCCCCCCCCCCCCEEEECCHHCCCCCCHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHH KEVPWLVQYIGDEKKNKIGIRKAYEIYTLLSKKNLLDLDKRIPKTELTKLITDKEGRKIL HCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCHHHHH ERDDLLQLILDHKMAVSQAINKLKTEEKIKQSKKKSRVKTEDEYAETDEEEEDETEEGQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHH ELDENEEYPLLEEWQKAKEEEKQEAEQQLTPQLNVSPNSNTTQVTLEFSNVLKELSNKGF HCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEEHHHHHHHHHCCCC TKLDFNTDVVIAKINDKYYAILLEALKSLERGSKQYKELAEFLVSNNLAVYDPEEDNYII EEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEE SWRSLNCS EEECCCCC >Mature Secondary Structure ARFIARTKLNIDDIKEVDEYKALIPENNQYEELKKAIKEQGFLFPVIVNQNRELIDGYT CCCHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHH RLRIARELGLTEIPAEVYETGGREEELDIIASLNLKRRHLTKDELVLLIDKIHEMKKRLK HHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHH KDNIEEQNSGTGARISAIDKENISKNSVTEESREIREELKKLVPDVQINEDTIRKYLQIK HCCCCCCCCCCCCEEEECCHHCCCCCCHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHH KEVPWLVQYIGDEKKNKIGIRKAYEIYTLLSKKNLLDLDKRIPKTELTKLITDKEGRKIL HCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCHHHHH ERDDLLQLILDHKMAVSQAINKLKTEEKIKQSKKKSRVKTEDEYAETDEEEEDETEEGQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHH ELDENEEYPLLEEWQKAKEEEKQEAEQQLTPQLNVSPNSNTTQVTLEFSNVLKELSNKGF HCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEEHHHHHHHHHCCCC TKLDFNTDVVIAKINDKYYAILLEALKSLERGSKQYKELAEFLVSNNLAVYDPEEDNYII EEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEE SWRSLNCS EEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA