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The map label for this gene is 15921578

Identifier: 15921578

GI number: 15921578

Start: 1313692

End: 1315314

Strand: Reverse

Name: 15921578

Synonym: ST1307

Alternate gene names: NA

Gene position: 1315314-1313692 (Counterclockwise)

Preceding gene: 15921579

Following gene: 15921576

Centisome position: 48.81

GC content: 38.76

Gene sequence:

>1623_bases
GTGGAGGTCCTTAAATTGCAGTTAAGACAATGGCAGGCGGAGAAATTAGGCGAAGCAATTAATGCTTTAAAGCATGGCAA
GACTCTTTTGCTTAACGCAAAGCCCGGCTTAGGTAAGACGGTCTTCGTTGAAGTATTAGGTATGCAACTGAAAAAGAAGG
TTCTGATATTTACCAGAACACATAGTCAGTTGGACAGCATTTACAAGAACGCCAAACTTTTGGGCTTAAAGACGGGCTTT
CTGATAGGTAAGTCAGCTTCATGTATTTACGCTCAGGGTGATGAGGAACCAGATGAAATAAACTGTAGTAAGTGCAGACT
GAAGGATAAAATAAAGACAATAGAGGACAAAGAGCCTTCAAAACTAATAGAGGAGTTTAAAGATGCTGTAGATTACTGTC
CCTATTATTCATTAAGGGCAAACCTTAAGGATAAGGACGTAATAGCGATGACTTATCCATATTTATTTCAGAAACCGATA
AGGAATTCCGTCTTCTGTAATAAGGATGATTGCTTAAAGCTTGAGGACTATCTGATCGTAATAGACGAAGCCCATAATTT
GCTTGAAGCGGATAAGTGGTTTACGAGGAAAATAAGTCGTAAAATGTTGGAGAGAGCGTTAAAAGAGATAGAAATTGTCG
AAAGGCTTAACAGAATAGATGCGAAGAAGGTAAAAGACTACATCAACTTGCTTATCGATTATATGAGTAAACTAATCAAG
GACGGGAGGTGTCACGAATTATCATTAATGCCATTACCAGATAGGGAAACAAACGGCGAGTTAATAGTAGTAACCAGAGC
GTATTTAAATATAGATGAGGGACCGGTAAAGAAGTCAAGTTTGAAGTCGTTACTAAAGTTTGTTGAGATGAAAGGTGATC
TGTATAACTGCAACGGAAGTCTGGTTAAAGTACCTTCAGACGTTAACCAATTAATTGAAGACGCACTTAACGTTAAGACG
TTTAAAGTTTTGATGAGCGGTACTTTACCCGAATCTTTAACACTTACAAATTCGTACAAGATTGTAGTAAACGAGAGTTA
CGGAAGGGGAGAGTACTATTACTGCCCAAACGTAACTTCGGAACTCCGTAAGAGGAACTCCAACATCCCCATTTACTCCA
TATTGCTTAAGAGGATTTATGAAAACAGCAGTAAGAGTGTTCTTGTTTTCTTTCCCAGCTACGAAATGTTAGAAAGTGTC
AGAATCCATCTATCGGGAATTCCGGTTATTGAGGAGAATAAAAAGACCAGACACGAAGAGGTTTTAGAGCTGATGAAGAC
CGGCAAATATCTCGTAATGTTGGTAATGCGTGCTAAAGAGAGTGAGGGAGTGGAGTTTAGAGAAAAGGAGAACCTATTTG
AAAGTTTAGTGCTTGCAGGATTGCCTTATCCTAACGTTTCGGATGATATGGTAAGGAAGAGAATAGAGAGGCTGAGCAAA
TTAACTGGTAAAGATGAGGACTCAATAATACACGACTTAACTGCAATAGTGATTAAGCAGACTATCGGCAGGGCTTTTAG
GGATCCTAACGATTATGTTAAGATTTACCTTTGTGATTCAAGGTATAGGGAATATTTTGCTGACCTGGGTATTTCCGAAA
AAGAGATTAAGCTTTTTGCATAG

Upstream 100 bases:

>100_bases
CGTTGGAAAGGGGATCAAAACAGTATAAGGAATTAGCCGAATTTCTAGTCTCTAACAATCTGGCAGTTTACGACCCAGAA
GAAGATAACTACATCATTTC

Downstream 100 bases:

>100_bases
CAGGAAAACCCTTTGAAATATTCCAGAGAGAAGTTAGGAAAAGACATGTATGGTAATAATATGTTCTCAATAGAAGTTAC
TGGTGATATAAGGATACTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MEVLKLQLRQWQAEKLGEAINALKHGKTLLLNAKPGLGKTVFVEVLGMQLKKKVLIFTRTHSQLDSIYKNAKLLGLKTGF
LIGKSASCIYAQGDEEPDEINCSKCRLKDKIKTIEDKEPSKLIEEFKDAVDYCPYYSLRANLKDKDVIAMTYPYLFQKPI
RNSVFCNKDDCLKLEDYLIVIDEAHNLLEADKWFTRKISRKMLERALKEIEIVERLNRIDAKKVKDYINLLIDYMSKLIK
DGRCHELSLMPLPDRETNGELIVVTRAYLNIDEGPVKKSSLKSLLKFVEMKGDLYNCNGSLVKVPSDVNQLIEDALNVKT
FKVLMSGTLPESLTLTNSYKIVVNESYGRGEYYYCPNVTSELRKRNSNIPIYSILLKRIYENSSKSVLVFFPSYEMLESV
RIHLSGIPVIEENKKTRHEEVLELMKTGKYLVMLVMRAKESEGVEFREKENLFESLVLAGLPYPNVSDDMVRKRIERLSK
LTGKDEDSIIHDLTAIVIKQTIGRAFRDPNDYVKIYLCDSRYREYFADLGISEKEIKLFA

Sequences:

>Translated_540_residues
MEVLKLQLRQWQAEKLGEAINALKHGKTLLLNAKPGLGKTVFVEVLGMQLKKKVLIFTRTHSQLDSIYKNAKLLGLKTGF
LIGKSASCIYAQGDEEPDEINCSKCRLKDKIKTIEDKEPSKLIEEFKDAVDYCPYYSLRANLKDKDVIAMTYPYLFQKPI
RNSVFCNKDDCLKLEDYLIVIDEAHNLLEADKWFTRKISRKMLERALKEIEIVERLNRIDAKKVKDYINLLIDYMSKLIK
DGRCHELSLMPLPDRETNGELIVVTRAYLNIDEGPVKKSSLKSLLKFVEMKGDLYNCNGSLVKVPSDVNQLIEDALNVKT
FKVLMSGTLPESLTLTNSYKIVVNESYGRGEYYYCPNVTSELRKRNSNIPIYSILLKRIYENSSKSVLVFFPSYEMLESV
RIHLSGIPVIEENKKTRHEEVLELMKTGKYLVMLVMRAKESEGVEFREKENLFESLVLAGLPYPNVSDDMVRKRIERLSK
LTGKDEDSIIHDLTAIVIKQTIGRAFRDPNDYVKIYLCDSRYREYFADLGISEKEIKLFA
>Mature_540_residues
MEVLKLQLRQWQAEKLGEAINALKHGKTLLLNAKPGLGKTVFVEVLGMQLKKKVLIFTRTHSQLDSIYKNAKLLGLKTGF
LIGKSASCIYAQGDEEPDEINCSKCRLKDKIKTIEDKEPSKLIEEFKDAVDYCPYYSLRANLKDKDVIAMTYPYLFQKPI
RNSVFCNKDDCLKLEDYLIVIDEAHNLLEADKWFTRKISRKMLERALKEIEIVERLNRIDAKKVKDYINLLIDYMSKLIK
DGRCHELSLMPLPDRETNGELIVVTRAYLNIDEGPVKKSSLKSLLKFVEMKGDLYNCNGSLVKVPSDVNQLIEDALNVKT
FKVLMSGTLPESLTLTNSYKIVVNESYGRGEYYYCPNVTSELRKRNSNIPIYSILLKRIYENSSKSVLVFFPSYEMLESV
RIHLSGIPVIEENKKTRHEEVLELMKTGKYLVMLVMRAKESEGVEFREKENLFESLVLAGLPYPNVSDDMVRKRIERLSK
LTGKDEDSIIHDLTAIVIKQTIGRAFRDPNDYVKIYLCDSRYREYFADLGISEKEIKLFA

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555 [H]

Pfam domain/function: PF06733 DEAD_2 [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 62233; Mature: 62233

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVLKLQLRQWQAEKLGEAINALKHGKTLLLNAKPGLGKTVFVEVLGMQLKKKVLIFTRT
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEEC
HSQLDSIYKNAKLLGLKTGFLIGKSASCIYAQGDEEPDEINCSKCRLKDKIKTIEDKEPS
HHHHHHHHHCCEEEEEEECEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHH
KLIEEFKDAVDYCPYYSLRANLKDKDVIAMTYPYLFQKPIRNSVFCNKDDCLKLEDYLIV
HHHHHHHHHHHHCCCHHHCCCCCCCCEEEEECHHHHHHHHCCCCCCCCCCCEEEECEEEE
IDEAHNLLEADKWFTRKISRKMLERALKEIEIVERLNRIDAKKVKDYINLLIDYMSKLIK
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
DGRCHELSLMPLPDRETNGELIVVTRAYLNIDEGPVKKSSLKSLLKFVEMKGDLYNCNGS
CCCCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEECCCC
LVKVPSDVNQLIEDALNVKTFKVLMSGTLPESLTLTNSYKIVVNESYGRGEYYYCPNVTS
EEECCHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEECCEEEEEECCCCCCCEEECCCHHH
ELRKRNSNIPIYSILLKRIYENSSKSVLVFFPSYEMLESVRIHLSGIPVIEENKKTRHEE
HHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCEEECCCHHHHHH
VLELMKTGKYLVMLVMRAKESEGVEFREKENLFESLVLAGLPYPNVSDDMVRKRIERLSK
HHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LTGKDEDSIIHDLTAIVIKQTIGRAFRDPNDYVKIYLCDSRYREYFADLGISEKEIKLFA
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHCCCCHHHEEEEC
>Mature Secondary Structure
MEVLKLQLRQWQAEKLGEAINALKHGKTLLLNAKPGLGKTVFVEVLGMQLKKKVLIFTRT
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEEC
HSQLDSIYKNAKLLGLKTGFLIGKSASCIYAQGDEEPDEINCSKCRLKDKIKTIEDKEPS
HHHHHHHHHCCEEEEEEECEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHH
KLIEEFKDAVDYCPYYSLRANLKDKDVIAMTYPYLFQKPIRNSVFCNKDDCLKLEDYLIV
HHHHHHHHHHHHCCCHHHCCCCCCCCEEEEECHHHHHHHHCCCCCCCCCCCEEEECEEEE
IDEAHNLLEADKWFTRKISRKMLERALKEIEIVERLNRIDAKKVKDYINLLIDYMSKLIK
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
DGRCHELSLMPLPDRETNGELIVVTRAYLNIDEGPVKKSSLKSLLKFVEMKGDLYNCNGS
CCCCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEECCCC
LVKVPSDVNQLIEDALNVKTFKVLMSGTLPESLTLTNSYKIVVNESYGRGEYYYCPNVTS
EEECCHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEECCEEEEEECCCCCCCEEECCCHHH
ELRKRNSNIPIYSILLKRIYENSSKSVLVFFPSYEMLESVRIHLSGIPVIEENKKTRHEE
HHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCEEECCCHHHHHH
VLELMKTGKYLVMLVMRAKESEGVEFREKENLFESLVLAGLPYPNVSDDMVRKRIERLSK
HHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LTGKDEDSIIHDLTAIVIKQTIGRAFRDPNDYVKIYLCDSRYREYFADLGISEKEIKLFA
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHCCCCHHHEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA