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The map label for this gene is 15921536

Identifier: 15921536

GI number: 15921536

Start: 1271052

End: 1271354

Strand: Reverse

Name: 15921536

Synonym: ST1272

Alternate gene names: NA

Gene position: 1271354-1271052 (Counterclockwise)

Preceding gene: 15921539

Following gene: 15921535

Centisome position: 47.18

GC content: 31.02

Gene sequence:

>303_bases
ATGGGAGAATATATTATACTTGTGACAAAGATTAAACTTGTAGAGGTAGGAGAATACTTAAAAAATACACTAAATAATAA
ATGGCTTCTTAAAGGAAATCCTAAAATAGACTATTCGTCTCAAGAGTATACTGGTAAAGTTTTAGTTGATGAACAAGGAA
ATCGAGTAGGCAAAATCTTAGATATAATTGGAAATGTGGAAGAACCATACATACTAGCATTACCGTTATCAGAAAAAGCA
CCCCAAGGTAAGTTATACGTAGAACTTAAAGAAAAGAGGGGTAAGAAAAAATGGAGAAAATAA

Upstream 100 bases:

>100_bases
TTAATCCAAATATAAGCTTTCAAGCCAATAATCTAAATCTTAAGCTCAATAATACCCCATCTTCTTCTCAAAGAGTATTA
TTATAAATATCAACTAATAT

Downstream 100 bases:

>100_bases
AGTGCCCTAATTGCGGAAGTGAAAGTATAACGTTAGATCTAAACAAAGGCACATACATCTGTACTAATTGTGGATATGTC
ATTGATGAATTTGTTATAGA

Product: H/ACA RNA-protein complex component Gar1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MGEYIILVTKIKLVEVGEYLKNTLNNKWLLKGNPKIDYSSQEYTGKVLVDEQGNRVGKILDIIGNVEEPYILALPLSEKA
PQGKLYVELKEKRGKKKWRK

Sequences:

>Translated_100_residues
MGEYIILVTKIKLVEVGEYLKNTLNNKWLLKGNPKIDYSSQEYTGKVLVDEQGNRVGKILDIIGNVEEPYILALPLSEKA
PQGKLYVELKEKRGKKKWRK
>Mature_99_residues
GEYIILVTKIKLVEVGEYLKNTLNNKWLLKGNPKIDYSSQEYTGKVLVDEQGNRVGKILDIIGNVEEPYILALPLSEKAP
QGKLYVELKEKRGKKKWRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11504; Mature: 11372

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEYIILVTKIKLVEVGEYLKNTLNNKWLLKGNPKIDYSSQEYTGKVLVDEQGNRVGKIL
CCCEEEEEEEEEEEHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHH
DIIGNVEEPYILALPLSEKAPQGKLYVELKEKRGKKKWRK
HHHCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
GEYIILVTKIKLVEVGEYLKNTLNNKWLLKGNPKIDYSSQEYTGKVLVDEQGNRVGKIL
CCEEEEEEEEEEEHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHH
DIIGNVEEPYILALPLSEKAPQGKLYVELKEKRGKKKWRK
HHHCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA