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The map label for this gene is 15921387

Identifier: 15921387

GI number: 15921387

Start: 1124898

End: 1126199

Strand: Reverse

Name: 15921387

Synonym: ST1130

Alternate gene names: NA

Gene position: 1126199-1124898 (Counterclockwise)

Preceding gene: 15921389

Following gene: 15921386

Centisome position: 41.79

GC content: 36.18

Gene sequence:

>1302_bases
ATGAACTATGATGTTATCATCATAGGTGCAGGACATAACGGTTTAGTCTCAGCAAACTACTTAGCAAAACATGGGTTAAA
AGTCCTTGTTATAGAAGCTAGGAGTAAACCGGGTGGAATGGCTGATACTGCAGAGTACAAAGGGTTAAAATATAGTAAAG
CCTCATATGTTTTAGGTCTATTCCCTAAAAGGATTGAGGAGGAATTGGGAATTTACTTCCCAGTTATAGACTCTCCTTTC
GCTGACATATTTTTAACTGAAGATGGTGAAGTATTATATCTGTGGAGAGATGAAAAGAAAAGAATTGAAGAGTTCAGAAA
ACATGGAGAGTACAAATACGAAAAGTTAGATAGGTTAATTTTCAAACTAAAGAGAATTGTTGAGGAAAAATTTCTTTTCG
TTACTAAGCCCCCTTCTATTGACGACTTCAAAAAAGCAGTTGAAAGCACAGAGTTAGAGATATTCCTTGAACCTACAAGA
AAAGTTCTCTCAGAATATCTTGATAATAAGTTTCATGAGGCTTTAGCCTATGCATTCATGTTTAATTTACCAGCTTATAT
AATGGCTTACTATTTTAGTCTGGAGTGGAGAATTGTTAAAGGTGGAATGGGAAGTGTAGGAAAAGTCTTAGAGGAGAATG
CTAAGAAACTAGGTGTAGATTTTATGTATGATACCAGAGTTGAAGAAATTGTAATAAAGAATGGAAAAGCTGAAGGTGTA
TCTATTAACAACGGTAAAGTAATTCAAAGTAAAGTAGTACTACATGCTGGGAGCCCAGTTCTACTAAATAGATTAACTAA
CGGTATGATAAGAGTTTATCATCCGAATTTTATACCAGGGTGGAGAAGATGGACCTTATTACTAAAAGAAGCACCTAAAG
TACCAGACTTTATGAAGGATAATCTCGACTCTCTCTTCACGTTACCTTTTGGAGAAGTAACTATTCCTTCAGCTGTTGAT
CCTTCACTAGGATGCCATGTGATAACCAGCATGGGTGGTGATATTGAGGAAATTAAGGATTTCTTTAAGGTAAAAGAAGA
AAGCGTAATTCACATCGACCTACTTACGGCTGATAAACTTGAAAAAGAGTATTTAGCACCTTTTGGTGATATGAACCATA
TGCCAATGACTCCAGAGTTTATGTTTGATGATAGACCCGTAAAGGGTTGGGGTTATACAACTCCTATAAAGAATCTTTAT
ATTACGGGCTCTGGCACATATCCAGGTGGTCAAGTAACTGGGATTCCTGGTAGAAACGCTGCCATGAAAATTTTAGAGGA
TTTAATTCGGGAAAACACTTAA

Upstream 100 bases:

>100_bases
AATAGTTATAAGCGGGATTGGCATAATTAAATCTCGATTCCACGCTTAAAATATTTTGTTCTAAGTTGAATATTTTACCT
TCCTACTCGATTAAAGATTT

Downstream 100 bases:

>100_bases
TAATACTTTATCGTAACTTATACTCATGAAAAATGAAATTATAATTTTCTCTGTAATTTTTTCGACAATAGCACCGGCAA
TTTTAGCAACAACTCACCTA

Product: hypothetical protein

Products: NA

Alternate protein names: Phytoene Dehydrogenase; Oxidoreductase; Oxidoreductase Family Protein; Amine Oxidase; FAD Dependent Oxidoreductase Phytoene Dehydrogenase; Beta-Carotene Ketolase; Flavin Containing Amine Oxidase; Phytoene Desaturase Family Protein; Phytoene Dehydrogenase Related Protein; Dehydrogenase; Dehydrogenase/Oxidoreductase; FAD Dependent Oxidoreductase Domain Protein; Glucose-Inhibited Division Protein A

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MNYDVIIIGAGHNGLVSANYLAKHGLKVLVIEARSKPGGMADTAEYKGLKYSKASYVLGLFPKRIEEELGIYFPVIDSPF
ADIFLTEDGEVLYLWRDEKKRIEEFRKHGEYKYEKLDRLIFKLKRIVEEKFLFVTKPPSIDDFKKAVESTELEIFLEPTR
KVLSEYLDNKFHEALAYAFMFNLPAYIMAYYFSLEWRIVKGGMGSVGKVLEENAKKLGVDFMYDTRVEEIVIKNGKAEGV
SINNGKVIQSKVVLHAGSPVLLNRLTNGMIRVYHPNFIPGWRRWTLLLKEAPKVPDFMKDNLDSLFTLPFGEVTIPSAVD
PSLGCHVITSMGGDIEEIKDFFKVKEESVIHIDLLTADKLEKEYLAPFGDMNHMPMTPEFMFDDRPVKGWGYTTPIKNLY
ITGSGTYPGGQVTGIPGRNAAMKILEDLIRENT

Sequences:

>Translated_433_residues
MNYDVIIIGAGHNGLVSANYLAKHGLKVLVIEARSKPGGMADTAEYKGLKYSKASYVLGLFPKRIEEELGIYFPVIDSPF
ADIFLTEDGEVLYLWRDEKKRIEEFRKHGEYKYEKLDRLIFKLKRIVEEKFLFVTKPPSIDDFKKAVESTELEIFLEPTR
KVLSEYLDNKFHEALAYAFMFNLPAYIMAYYFSLEWRIVKGGMGSVGKVLEENAKKLGVDFMYDTRVEEIVIKNGKAEGV
SINNGKVIQSKVVLHAGSPVLLNRLTNGMIRVYHPNFIPGWRRWTLLLKEAPKVPDFMKDNLDSLFTLPFGEVTIPSAVD
PSLGCHVITSMGGDIEEIKDFFKVKEESVIHIDLLTADKLEKEYLAPFGDMNHMPMTPEFMFDDRPVKGWGYTTPIKNLY
ITGSGTYPGGQVTGIPGRNAAMKILEDLIRENT
>Mature_433_residues
MNYDVIIIGAGHNGLVSANYLAKHGLKVLVIEARSKPGGMADTAEYKGLKYSKASYVLGLFPKRIEEELGIYFPVIDSPF
ADIFLTEDGEVLYLWRDEKKRIEEFRKHGEYKYEKLDRLIFKLKRIVEEKFLFVTKPPSIDDFKKAVESTELEIFLEPTR
KVLSEYLDNKFHEALAYAFMFNLPAYIMAYYFSLEWRIVKGGMGSVGKVLEENAKKLGVDFMYDTRVEEIVIKNGKAEGV
SINNGKVIQSKVVLHAGSPVLLNRLTNGMIRVYHPNFIPGWRRWTLLLKEAPKVPDFMKDNLDSLFTLPFGEVTIPSAVD
PSLGCHVITSMGGDIEEIKDFFKVKEESVIHIDLLTADKLEKEYLAPFGDMNHMPMTPEFMFDDRPVKGWGYTTPIKNLY
ITGSGTYPGGQVTGIPGRNAAMKILEDLIRENT

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI229577391, Length=551, Percent_Identity=25.7713248638838, Blast_Score=133, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI17540238, Length=533, Percent_Identity=26.6416510318949, Blast_Score=146, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49197; Mature: 49197

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYDVIIIGAGHNGLVSANYLAKHGLKVLVIEARSKPGGMADTAEYKGLKYSKASYVLGL
CCEEEEEEECCCCCCEECHHHHHCCCEEEEEEECCCCCCCCCCHHHCCCEECCCHHHHHC
FPKRIEEELGIYFPVIDSPFADIFLTEDGEVLYLWRDEKKRIEEFRKHGEYKYEKLDRLI
CHHHHHHHCCEEEEECCCCCCEEEEECCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHH
FKLKRIVEEKFLFVTKPPSIDDFKKAVESTELEIFLEPTRKVLSEYLDNKFHEALAYAFM
HHHHHHHHHHEEEEECCCCHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH
FNLPAYIMAYYFSLEWRIVKGGMGSVGKVLEENAKKLGVDFMYDTRVEEIVIKNGKAEGV
HHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHCCCEEEECCCHHEEEEECCCCCCE
SINNGKVIQSKVVLHAGSPVLLNRLTNGMIRVYHPNFIPGWRRWTLLLKEAPKVPDFMKD
ECCCCEEEEEEEEEECCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHC
NLDSLFTLPFGEVTIPSAVDPSLGCHVITSMGGDIEEIKDFFKVKEESVIHIDLLTADKL
CHHHEEECCCCCEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEECHHHH
EKEYLAPFGDMNHMPMTPEFMFDDRPVKGWGYTTPIKNLYITGSGTYPGGQVTGIPGRNA
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCHH
AMKILEDLIRENT
HHHHHHHHHHCCC
>Mature Secondary Structure
MNYDVIIIGAGHNGLVSANYLAKHGLKVLVIEARSKPGGMADTAEYKGLKYSKASYVLGL
CCEEEEEEECCCCCCEECHHHHHCCCEEEEEEECCCCCCCCCCHHHCCCEECCCHHHHHC
FPKRIEEELGIYFPVIDSPFADIFLTEDGEVLYLWRDEKKRIEEFRKHGEYKYEKLDRLI
CHHHHHHHCCEEEEECCCCCCEEEEECCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHH
FKLKRIVEEKFLFVTKPPSIDDFKKAVESTELEIFLEPTRKVLSEYLDNKFHEALAYAFM
HHHHHHHHHHEEEEECCCCHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH
FNLPAYIMAYYFSLEWRIVKGGMGSVGKVLEENAKKLGVDFMYDTRVEEIVIKNGKAEGV
HHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHCCCEEEECCCHHEEEEECCCCCCE
SINNGKVIQSKVVLHAGSPVLLNRLTNGMIRVYHPNFIPGWRRWTLLLKEAPKVPDFMKD
ECCCCEEEEEEEEEECCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHC
NLDSLFTLPFGEVTIPSAVDPSLGCHVITSMGGDIEEIKDFFKVKEESVIHIDLLTADKL
CHHHEEECCCCCEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEECHHHH
EKEYLAPFGDMNHMPMTPEFMFDDRPVKGWGYTTPIKNLYITGSGTYPGGQVTGIPGRNA
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCHH
AMKILEDLIRENT
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA