| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is insA1 [C]
Identifier: 15921335
GI number: 15921335
Start: 1066285
End: 1067019
Strand: Reverse
Name: insA1 [C]
Synonym: ST1082
Alternate gene names: 15921335
Gene position: 1067019-1066285 (Counterclockwise)
Preceding gene: 15921340
Following gene: 15921330
Centisome position: 39.6
GC content: 43.54
Gene sequence:
>735_bases ATGGGTAGGAAGCCTGTATTTAGGCAAGATTTAGCTTGTCCCTCTTGTGGTAGTCATCACGTCGTTAAGTGCGGTAAGCC TCTTGGTAGGCAGAGGTTTCTGTGTAGGGATTGCGGTAAGTACTTTCTTGCAGACGCGGTTTATCACCACCACTCTAAGG AGGTGAGGGAGAAGGCTTTGAGGATGTATACTAATGGTATGAGTATGAGAGCTATTTCTAGGGTTCTTAACGTACCTCTG GGTACTGTTTTCACTTGGATTAAGCGTTATGGTAAGAGGAAATATGAGAAGCTAGTGGACTTGTGGAATAAGGCTAAAGA GCTGGTCAAGGGTAAGGTCGTTACTAAGGTTGTTGATGAGATGTGGACATACTTGTACAGAAACACTAGGGCTTTCTACA AGTGGGTATTCACTTGTTATGTGTACACTAGGCTAGGGTTATACATAATTTACTCTGTGGGTGATAGGGACGAGAATACT TTTCGTGAGGTCAAGGACTACGTGCCAGATGATGGTAGGTGGGTGAGTGATGATTACAACGTTTACTTTTGGTTAAAAAA CCACACGGTAGTCTCACTTGTTAATCCCAACGAGGGGCTTCATTCCTCACTGAGGGATAGGCTTGTACGTTTCAAGAGGG CTACGAAGGCTGTTAACAGGAGTATAAATATGGTGAAGTATTCTATAGCACTAGTCTTGTGGGAGAGAAGGCTAATCCCA GAATTTGTAGCTTAA
Upstream 100 bases:
>100_bases TAAATTCTATTTTAAAGTATAAAAGCTTTACTCTAATCATGAAGAGTGTGGAGATAGTGTCGTCATTAAGCTATTTATAT TTGTATTACGAGTATTACTT
Downstream 100 bases:
>100_bases TGACGACACTATCAGTGTGGACAACAATATTTTTAATTTGATATAAATTATATAGAATGTAAATTTAGTTTCAATTTATC GTTAGATCTCTTTACTGATA
Product: insertion element protein
Products: NA
Alternate protein names: IS1 Transposase; Second ORF In Transposon ISC; Transposase ISC
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MGRKPVFRQDLACPSCGSHHVVKCGKPLGRQRFLCRDCGKYFLADAVYHHHSKEVREKALRMYTNGMSMRAISRVLNVPL GTVFTWIKRYGKRKYEKLVDLWNKAKELVKGKVVTKVVDEMWTYLYRNTRAFYKWVFTCYVYTRLGLYIIYSVGDRDENT FREVKDYVPDDGRWVSDDYNVYFWLKNHTVVSLVNPNEGLHSSLRDRLVRFKRATKAVNRSINMVKYSIALVLWERRLIP EFVA
Sequences:
>Translated_244_residues MGRKPVFRQDLACPSCGSHHVVKCGKPLGRQRFLCRDCGKYFLADAVYHHHSKEVREKALRMYTNGMSMRAISRVLNVPL GTVFTWIKRYGKRKYEKLVDLWNKAKELVKGKVVTKVVDEMWTYLYRNTRAFYKWVFTCYVYTRLGLYIIYSVGDRDENT FREVKDYVPDDGRWVSDDYNVYFWLKNHTVVSLVNPNEGLHSSLRDRLVRFKRATKAVNRSINMVKYSIALVLWERRLIP EFVA >Mature_243_residues GRKPVFRQDLACPSCGSHHVVKCGKPLGRQRFLCRDCGKYFLADAVYHHHSKEVREKALRMYTNGMSMRAISRVLNVPLG TVFTWIKRYGKRKYEKLVDLWNKAKELVKGKVVTKVVDEMWTYLYRNTRAFYKWVFTCYVYTRLGLYIIYSVGDRDENTF REVKDYVPDDGRWVSDDYNVYFWLKNHTVVSLVNPNEGLHSSLRDRLVRFKRATKAVNRSINMVKYSIALVLWERRLIPE FVA
Specific function: Absolutely required for transposition of is1 [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28913; Mature: 28782
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRKPVFRQDLACPSCGSHHVVKCGKPLGRQRFLCRDCGKYFLADAVYHHHSKEVREKAL CCCCCCCHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMYTNGMSMRAISRVLNVPLGTVFTWIKRYGKRKYEKLVDLWNKAKELVKGKVVTKVVDE HHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MWTYLYRNTRAFYKWVFTCYVYTRLGLYIIYSVGDRDENTFREVKDYVPDDGRWVSDDYN HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHCCCCCCEEECCCCE VYFWLKNHTVVSLVNPNEGLHSSLRDRLVRFKRATKAVNRSINMVKYSIALVLWERRLIP EEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFVA HHCC >Mature Secondary Structure GRKPVFRQDLACPSCGSHHVVKCGKPLGRQRFLCRDCGKYFLADAVYHHHSKEVREKAL CCCCCCHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMYTNGMSMRAISRVLNVPLGTVFTWIKRYGKRKYEKLVDLWNKAKELVKGKVVTKVVDE HHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MWTYLYRNTRAFYKWVFTCYVYTRLGLYIIYSVGDRDENTFREVKDYVPDDGRWVSDDYN HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHCCCCCCEEECCCCE VYFWLKNHTVVSLVNPNEGLHSSLRDRLVRFKRATKAVNRSINMVKYSIALVLWERRLIP EEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFVA HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA