| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15921308
Identifier: 15921308
GI number: 15921308
Start: 1042793
End: 1043608
Strand: Reverse
Name: 15921308
Synonym: ST1057
Alternate gene names: NA
Gene position: 1043608-1042793 (Counterclockwise)
Preceding gene: 15921310
Following gene: 15921305
Centisome position: 38.73
GC content: 32.84
Gene sequence:
>816_bases ATGGATCTTATGATTAAAGTGATTGATGCTCACGTTCATTATCATATTTTTGCCGGAAAAATACCAGCTCATTGTAAGGA GTTTTTAGAATATGCTAAAGGAACAAAGTATACGTTAAAGAATGAATATGTTGAGCTTGAAAAAATTATTTTGGTTCCTT CTCATCCTTGCCACAGTGATGAATGTTCAGATGGTTTTTACATTGATTATGAAGAAAGAAGAAAAAATCCCGATCTTTAT TTGCAATGGGGTGAGGTGAATCCACTAACATGTAACGTTAAGGAAGAGTTAGAAAAACAGTACTCTTTGGGTATAATAGG CATAAAACTTCATCCAGTACATAAGGGATTTAAACCTAATGCTTATAGGGAAGAAGAAGGCGGATTAAAGAGTTTACTCT TCGTCTACGAATTTGCTGAAGACCATGACTTACCAATTATGTTCCATACGGGAACTAGTATAGGTGTTGGAAGCAGGAAT AAATACGCTGATCCTATTTATATAGACGATGTTGCTAAAGATTTTCCTAAATTAAAAATACTCTTAGCCCATGCTGGAAG GCCATTATGGTATGAAACAGCATTCTATCTAGTTAAGTCTCTAAATAACGTATACTTAGAAATTTCATCGATACCTCCAA AGAATTTATTGAAATTATTGCCAAGAATAAATGAGATTTCTAAAAAAGTTATTTATGGTAGTGATTTCCCTGCATTTAAG GGTCAAGATTTAGCTGATTATGCTTTTCAGGTTTACAGTATTCTGAAAGACGAAAAGATAATGAGAGATAACGCTAAAAG AATATTGAAAATTTAG
Upstream 100 bases:
>100_bases TGATTTAGCTAGAGAAAATCACGAAGGTAATTGAAAGCAATAAGATTACTCTTTTCTTATCTTCCAGCTATCATTATAAA TTTTAGCATTGAAAATTAAC
Downstream 100 bases:
>100_bases TGTTTTATCATTTAACAAATTACTATCACAATTTGCTGAAATCGTGGAGAACTACATTGTCTGAATTTTTAACATTTCAC GGAAAACTTAATATTTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Metal-Dependent Hydrolase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; TIM-Barrel Fold Metal-Dependent Hydrolase; Amidohydrolase Protein
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MDLMIKVIDAHVHYHIFAGKIPAHCKEFLEYAKGTKYTLKNEYVELEKIILVPSHPCHSDECSDGFYIDYEERRKNPDLY LQWGEVNPLTCNVKEELEKQYSLGIIGIKLHPVHKGFKPNAYREEEGGLKSLLFVYEFAEDHDLPIMFHTGTSIGVGSRN KYADPIYIDDVAKDFPKLKILLAHAGRPLWYETAFYLVKSLNNVYLEISSIPPKNLLKLLPRINEISKKVIYGSDFPAFK GQDLADYAFQVYSILKDEKIMRDNAKRILKI
Sequences:
>Translated_271_residues MDLMIKVIDAHVHYHIFAGKIPAHCKEFLEYAKGTKYTLKNEYVELEKIILVPSHPCHSDECSDGFYIDYEERRKNPDLY LQWGEVNPLTCNVKEELEKQYSLGIIGIKLHPVHKGFKPNAYREEEGGLKSLLFVYEFAEDHDLPIMFHTGTSIGVGSRN KYADPIYIDDVAKDFPKLKILLAHAGRPLWYETAFYLVKSLNNVYLEISSIPPKNLLKLLPRINEISKKVIYGSDFPAFK GQDLADYAFQVYSILKDEKIMRDNAKRILKI >Mature_271_residues MDLMIKVIDAHVHYHIFAGKIPAHCKEFLEYAKGTKYTLKNEYVELEKIILVPSHPCHSDECSDGFYIDYEERRKNPDLY LQWGEVNPLTCNVKEELEKQYSLGIIGIKLHPVHKGFKPNAYREEEGGLKSLLFVYEFAEDHDLPIMFHTGTSIGVGSRN KYADPIYIDDVAKDFPKLKILLAHAGRPLWYETAFYLVKSLNNVYLEISSIPPKNLLKLLPRINEISKKVIYGSDFPAFK GQDLADYAFQVYSILKDEKIMRDNAKRILKI
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31317; Mature: 31317
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLMIKVIDAHVHYHIFAGKIPAHCKEFLEYAKGTKYTLKNEYVELEKIILVPSHPCHSD CCEEEEEEECEEEEEEEECCCCHHHHHHHHHHCCCCEEEHHHHEEEEEEEEECCCCCCCC ECSDGFYIDYEERRKNPDLYLQWGEVNPLTCNVKEELEKQYSLGIIGIKLHPVHKGFKPN CCCCCEEEEHHHHCCCCCEEEEECCCCCEEECHHHHHHHHHCCCEEEEEEEECCCCCCCC AYREEEGGLKSLLFVYEFAEDHDLPIMFHTGTSIGVGSRNKYADPIYIDDVAKDFPKLKI CCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCEECCCCCCCCCCCEEECHHHCCCCCEEE LLAHAGRPLWYETAFYLVKSLNNVYLEISSIPPKNLLKLLPRINEISKKVIYGSDFPAFK EEECCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCCC GQDLADYAFQVYSILKDEKIMRDNAKRILKI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDLMIKVIDAHVHYHIFAGKIPAHCKEFLEYAKGTKYTLKNEYVELEKIILVPSHPCHSD CCEEEEEEECEEEEEEEECCCCHHHHHHHHHHCCCCEEEHHHHEEEEEEEEECCCCCCCC ECSDGFYIDYEERRKNPDLYLQWGEVNPLTCNVKEELEKQYSLGIIGIKLHPVHKGFKPN CCCCCEEEEHHHHCCCCCEEEEECCCCCEEECHHHHHHHHHCCCEEEEEEEECCCCCCCC AYREEEGGLKSLLFVYEFAEDHDLPIMFHTGTSIGVGSRNKYADPIYIDDVAKDFPKLKI CCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCEECCCCCCCCCCCEEECHHHCCCCCEEE LLAHAGRPLWYETAFYLVKSLNNVYLEISSIPPKNLLKLLPRINEISKKVIYGSDFPAFK EEECCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCCC GQDLADYAFQVYSILKDEKIMRDNAKRILKI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA