Click here to switch to the map view.

The map label for this gene is tnpA1 [H]

Identifier: 15921300

GI number: 15921300

Start: 1034980

End: 1035390

Strand: Direct

Name: tnpA1 [H]

Synonym: ST1048

Alternate gene names: 15921300

Gene position: 1034980-1035390 (Clockwise)

Preceding gene: 15921296

Following gene: 15921301

Centisome position: 38.41

GC content: 44.04

Gene sequence:

>411_bases
GTGGAATACAAATCAACTAGGCATGCAAAGTACCTCTGCAACTACCACTTCTTATGGATACCGAAATACCGTAGGAAAGT
GCTAACAGGCGAAATAGCTGAATACACTAAAGAGGTACTAAGAACCATAGCAGAAGAGTTGGGCTGTGAAGTATTAGCCC
TAGAAGTAATGCCAGACCACATCCACCTCTTCGTTAACTGCCCACCGAGATACGCACCGTCATATTTAGCAAACTACTTC
AAAGGAAAATCGGCAAGGCTAATCCTCAAGAAGTTCCCAGAGCTGAAGAAAGCTACTAACGGGAAGCTATGGACTAGAAG
CTACTTCGTATCTACCGCAGGTAACGTATCCAGCGAGACGATAAAGAAGTACATTGAAGAACAGTGGGCGAAAGAGAATG
AAGAGGACTAA

Upstream 100 bases:

>100_bases
GTAAGACCCTTATAAGTATGTATCCTTGACAAAACGTGAGGCAAGCCTCGCCTTTTAAGGCGGGGTAAAGTTTTTAAAAT
TATTTTGAATACTTTAAAGT

Downstream 100 bases:

>100_bases
CATAGTTAAACTAATAGTAGACAAGCAAACCCACGAAAGACTGAAGGAGTTGGCTATTACCACAGCGAAGTGTTGGAACG
AAGTGAACTGGTTAAGGATG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MEYKSTRHAKYLCNYHFLWIPKYRRKVLTGEIAEYTKEVLRTIAEELGCEVLALEVMPDHIHLFVNCPPRYAPSYLANYF
KGKSARLILKKFPELKKATNGKLWTRSYFVSTAGNVSSETIKKYIEEQWAKENEED

Sequences:

>Translated_136_residues
MEYKSTRHAKYLCNYHFLWIPKYRRKVLTGEIAEYTKEVLRTIAEELGCEVLALEVMPDHIHLFVNCPPRYAPSYLANYF
KGKSARLILKKFPELKKATNGKLWTRSYFVSTAGNVSSETIKKYIEEQWAKENEED
>Mature_136_residues
MEYKSTRHAKYLCNYHFLWIPKYRRKVLTGEIAEYTKEVLRTIAEELGCEVLALEVMPDHIHLFVNCPPRYAPSYLANYF
KGKSARLILKKFPELKKATNGKLWTRSYFVSTAGNVSSETIKKYIEEQWAKENEED

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 17 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002686 [H]

Pfam domain/function: PF01797 Transposase_17 [H]

EC number: NA

Molecular weight: Translated: 16015; Mature: 16015

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYKSTRHAKYLCNYHFLWIPKYRRKVLTGEIAEYTKEVLRTIAEELGCEVLALEVMPDH
CCCCCCHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCE
IHLFVNCPPRYAPSYLANYFKGKSARLILKKFPELKKATNGKLWTRSYFVSTAGNVSSET
EEEEEECCCCCCHHHHHHHHCCCCCHHHHHHCHHHHHHCCCCEEHHHHHHHCCCCCCHHH
IKKYIEEQWAKENEED
HHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEYKSTRHAKYLCNYHFLWIPKYRRKVLTGEIAEYTKEVLRTIAEELGCEVLALEVMPDH
CCCCCCHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCE
IHLFVNCPPRYAPSYLANYFKGKSARLILKKFPELKKATNGKLWTRSYFVSTAGNVSSET
EEEEEECCCCCCHHHHHHHHCCCCCHHHHHHCHHHHHHCCCCEEHHHHHHHCCCCCCHHH
IKKYIEEQWAKENEED
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]